Experiment set11IT089 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Methyl 6-Hydroxyangolensate 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_4740 -4.0 -5.4 thiazole-phosphate synthase compare
Psyr_4340 -4.0 -8.4 phosphomethylpyrimidine kinase, putative compare
Psyr_0951 -3.9 -4.6 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_1613 -3.8 -4.5 septum site-determining protein MinC compare
Psyr_4203 -3.5 -2.4 SsrA-binding protein compare
Psyr_3008 -3.4 -9.5 Undecaprenyl-diphosphatase compare
Psyr_4580 -3.2 -3.1 anthranilate phosphoribosyltransferase compare
Psyr_1544 -3.1 -5.0 SirA-like protein compare
Psyr_4686 -2.8 -6.4 8-amino-7-oxononanoate synthase compare
Psyr_4687 -2.7 -8.6 biotin synthase compare
Psyr_4341 -2.6 -6.8 thiamine-phosphate diphosphorylase compare
Psyr_0849 -2.5 -10.3 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_1663 -2.3 -4.0 phosphoribosylanthranilate isomerase compare
Psyr_4091 -2.3 -5.4 8-oxo-dGTPase compare
Psyr_0475 -2.2 -2.6 Protein of unknown function YGGT compare
Psyr_0917 -2.2 -12.0 ABC-2 compare
Psyr_4362 -2.1 -4.5 Rare lipoprotein A compare
Psyr_4683 -2.1 -4.7 dethiobiotin synthase compare
Psyr_1408 -2.1 -3.3 Holliday junction endonuclease RuvC compare
Psyr_4991 -2.1 -3.5 hypothetical protein compare
Psyr_4822 -2.0 -4.3 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_4684 -1.9 -3.3 biotin synthesis protein BioC compare
Psyr_4627 -1.9 -3.0 dimethyladenosine transferase compare
Psyr_0918 -1.8 -10.5 ABC transporter compare
Psyr_0454 -1.8 -5.2 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_1748 -1.7 -4.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_0255 -1.7 -2.8 glutamate-cysteine ligase compare
Psyr_0259 -1.6 -3.9 Osmolarity sensor protein envZ compare
Psyr_0574 -1.6 -5.1 protease FtsH subunit HflK compare
Psyr_4884 -1.6 -5.9 Rhodanese-like protein compare
Psyr_3854 -1.5 -2.0 OmpA/MotB compare
Psyr_0565 -1.4 -5.5 Protein of unknown function UPF0126 compare
Psyr_5135 -1.4 -2.2 Protein of unknown function DUF37 compare
Psyr_3808 -1.4 -1.1 hypothetical protein compare
Psyr_4754 -1.4 -1.9 16S rRNA m(2)G-966 methyltransferase compare
Psyr_1667 -1.3 -5.8 Colicin V production protein compare
Psyr_4833 -1.3 -4.0 histidine ammonia-lyase compare
Psyr_1556 -1.3 -2.2 hypothetical protein compare
Psyr_1751 -1.3 -3.9 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_3954 -1.3 -5.0 GTP-binding protein LepA compare
Psyr_0487 -1.3 -2.4 glutathione synthase compare
Psyr_4089 -1.2 -4.9 PAS compare
Psyr_4194 -1.2 -4.1 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_1907 -1.2 -2.6 GTP cyclohydrolase I compare
Psyr_2848 -1.2 -3.0 hypothetical protein compare
Psyr_3419 -1.2 -3.9 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_2855 -1.2 -3.6 methionine synthase (B12-independent) compare
Psyr_1212 -1.2 -2.1 type III secretion protein HrpO compare
Psyr_0014 -1.2 -2.9 lipid A biosynthesis acyltransferase compare
Psyr_1843 -1.1 -2.6 Protein of unknown function DUF1311 compare
Psyr_3581 -1.1 -4.1 ribosomal large subunit pseudouridine synthase B compare
Psyr_2227 -1.1 -2.4 conserved hypothetical protein compare
Psyr_2071 -1.1 -1.4 outer membrane lipoprotein OprI compare
Psyr_0529 -1.1 -3.1 Glycosyl transferase, group 1 compare
Psyr_1460 -1.1 -3.9 hypothetical protein compare
Psyr_0464 -1.1 -2.5 hypothetical protein compare
Psyr_0184 -1.1 -3.5 Protein of unknown function DUF484 compare
Psyr_1935 -1.1 -3.9 Protein of unknown function DUF796 compare
Psyr_1373 -1.1 -2.2 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_0838 -1.1 -2.3 Rieske [2Fe-2S] region compare
Psyr_4581 -1.1 -2.5 anthranilate synthase, component II compare
Psyr_0826 -1.1 -5.0 glucose-6-phosphate isomerase compare
Psyr_5133 -1.0 -3.0 tRNA modification GTPase trmE compare
Psyr_3947 -1.0 -2.5 Methyltransferase, putative compare
Psyr_2980 -1.0 -2.6 UDP-glucose pyrophosphorylase compare
Psyr_1140 -1.0 -2.2 Disulfide bond formation protein DsbB compare
Psyr_3806 -1.0 -3.9 hypothetical protein compare
Psyr_2779 -1.0 -2.2 Phage minor tail compare
Psyr_0724 -1.0 -2.0 conserved hypothetical protein compare
Psyr_1975 -1.0 -1.7 Integrase, catalytic region compare
Psyr_0281 -1.0 -3.0 ABC transporter compare
Psyr_1832 -1.0 -1.7 Exonuclease compare
Psyr_1245 -1.0 -4.6 23S rRNA m(2)A-2503 methyltransferase compare
Psyr_1371 -1.0 -5.0 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_2345 -1.0 -3.8 ea59 protein compare
Psyr_0215 -0.9 -6.3 Exodeoxyribonuclease III xth compare
Psyr_2428 -0.9 -2.9 GCN5-related N-acetyltransferase compare
Psyr_2346 -0.9 -2.9 conserved hypothetical protein compare
Psyr_2462 -0.9 -2.7 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_1268 -0.9 -4.6 extracellular solute-binding protein, family 3:SLT compare
Psyr_0579 -0.9 -6.2 RNAse R compare
Psyr_0927 -0.9 -2.2 hypothetical protein compare
Psyr_0531 -0.9 -1.3 LmbE-like protein compare
Psyr_4019 -0.9 -3.2 H-NS family protein MvaT compare
Psyr_0034 -0.9 -1.2 tryptophan synthase, beta chain compare
Psyr_0549 -0.9 -2.0 Metallophosphoesterase compare
Psyr_2182 -0.9 -4.1 hypothetical protein compare
Psyr_3179 -0.9 -1.6 DNA translocase FtsK compare
Psyr_3152 -0.9 -0.9 hypothetical protein compare
Psyr_4622 -0.9 -3.8 Nucleotidyl transferase compare
Psyr_0282 -0.9 -3.2 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1404 -0.9 -5.0 Ferritin and Dps compare
Psyr_0575 -0.9 -2.2 protease FtsH subunit HflC compare
Psyr_3026 -0.9 -2.5 transcriptional regulator, TetR family compare
Psyr_1350 -0.9 -2.6 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_1929 -0.9 -3.5 hypothetical protein compare
Psyr_3427 -0.9 -1.4 conserved hypothetical protein compare
Psyr_1530 -0.9 -1.8 hypothetical protein compare
Psyr_3896 -0.9 -1.8 BFD-like [2Fe-2S]-binding region compare
Psyr_2202 -0.9 -2.0 ABC transporter compare
Psyr_1418 -0.9 -1.9 Radical SAM compare
Psyr_0919 -0.9 -5.7 Chromosome segregation ATPase-like protein compare
Psyr_0394 -0.9 -3.6 Heat shock protein HslU compare
Psyr_2092 -0.9 -2.6 Protein of unknown function 1935 compare
Psyr_4408 -0.9 -4.6 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_4519 -0.8 -4.8 General substrate transporter:Major facilitator superfamily compare
Psyr_2456 -0.8 -2.3 Short-chain dehydrogenase/reductase SDR compare
Psyr_0580 -0.8 -2.3 23S rRNA Gm-2251 2'-O-methyltransferase compare
Psyr_5130 -0.8 -4.8 chromosome segregation ATPase compare
Psyr_3193 -0.8 -1.7 Transcription factor jumonji, jmjC compare
Psyr_2062 -0.8 -1.5 DoxD-like family protein compare
Psyr_2854 -0.8 -2.7 conserved hypothetical protein compare
Psyr_2899 -0.8 -3.2 conserved hypothetical protein compare
Psyr_3807 -0.8 -3.9 hypothetical protein compare
Psyr_1555 -0.8 -2.0 Cobyrinic acid a,c-diamide synthase compare
Psyr_2664 -0.8 -4.0 hypothetical protein compare
Psyr_5132 -0.8 -1.5 Glucose-inhibited division protein A subfamily compare
Psyr_0827 -0.8 -3.2 pantothenate synthetase compare
Psyr_3287 -0.8 -1.3 DNA topoisomerase I compare
Psyr_RNA61 -0.8 -2.0 tRNA-Gly compare
Psyr_2471 -0.8 -1.9 hydroxymethylglutaryl-CoA lyase compare
Psyr_2562 -0.8 -1.6 hypothetical protein compare
Psyr_3949 -0.8 -3.8 DNA replication and repair protein RecO compare
Psyr_2160 -0.8 -1.7 cold-shock DNA-binding protein family compare
Psyr_1410 -0.8 -2.6 Holliday junction DNA helicase RuvB compare
Psyr_0202 -0.8 -4.1 transcriptional regulator, LysR family compare
Psyr_0947 -0.8 -4.5 TPR repeat protein:TPR repeat protein compare
Psyr_2348 -0.8 -1.6 hypothetical protein compare
Psyr_3554 -0.8 -1.0 Carbon storage regulator compare
Psyr_0920 -0.8 -6.4 Glycosyl transferase, group 1 compare
Psyr_4254 -0.7 -1.0 conserved hypothetical protein compare
Psyr_3840 -0.7 -2.1 conserved hypothetical protein compare
Psyr_3154 -0.7 -2.9 transcriptional regulator, TetR family compare
Psyr_4593 -0.7 -2.1 sigma factor domain protein compare
Psyr_0959 -0.7 -3.7 Short-chain dehydrogenase/reductase SDR compare
Psyr_1645 -0.7 -2.1 phosphate:acyl-[acyl carrier protein] acyltransferase compare
Psyr_1688 -0.7 -1.6 Protein of unknown function DUF1315 compare
Psyr_0493 -0.7 -2.2 CheW-like protein compare
Psyr_5072 -0.7 -1.1 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_1324 -0.7 -2.3 conserved hypothetical protein compare
Psyr_2642 -0.7 -2.3 hypothetical protein compare
Psyr_0179 -0.7 -2.2 Protein of unknown function DUF1289 compare
Psyr_1553 -0.7 -2.9 hypothetical protein compare
Psyr_3199 -0.7 -1.8 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_2770 -0.7 -3.4 tail fiber domain protein compare
Psyr_3213 -0.7 -1.4 Propeptide, PepSY amd peptidase M4 compare
Psyr_3377 -0.7 -1.7 transcriptional regulator, MarR family compare
Psyr_4140 -0.7 -1.6 Protein of unknown function DUF140 compare
Psyr_2990 -0.7 -2.2 conserved hypothetical protein compare
Psyr_4465 -0.7 -1.5 conserved domain protein compare
Psyr_2844 -0.7 -2.0 hypothetical protein compare
Psyr_0268 -0.7 -1.4 DSBA oxidoreductase compare
Psyr_1749 -0.7 -3.4 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_3088 -0.7 -2.4 Glycosyl transferase, group 1 compare
Psyr_1801 -0.7 -2.3 1-aminocyclopropane-1-carboxylate deaminase compare
Psyr_2595 -0.7 -2.4 Dimethylmenaquinone methyltransferase compare
Psyr_1372 -0.7 -1.9 Protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psyr_3637 -0.7 -5.0 Glycosyl transferase, family 4 compare
Psyr_0916 -0.7 -4.5 GDP-mannose 4,6-dehydratase compare
Psyr_3208 -0.7 -1.5 NADH dehydrogenase subunit M compare
Psyr_2339 -0.7 -1.7 hypothetical protein compare
Psyr_3841 -0.7 -1.6 conserved hypothetical protein compare
Psyr_2771 -0.7 -3.4 conserved domain protein compare
Psyr_5065 -0.7 -3.9 ATP-dependent DNA helicase UvrD compare
Psyr_0889 -0.7 -2.2 SpoVT/AbrB-like protein compare
Psyr_3739 -0.7 -2.0 conserved hypothetical protein compare
Psyr_3723 -0.6 -2.0 CDS compare
Psyr_0319 -0.6 -3.5 conserved hypothetical protein compare
Psyr_1455 -0.6 -2.5 conserved hypothetical protein compare
Psyr_2396 -0.6 -1.8 Tartrate dehydrogenase compare
Psyr_3703 -0.6 -1.9 Flavodoxin/nitric oxide synthase compare
Psyr_2639 -0.6 -3.3 hypothetical protein compare
Psyr_1885 -0.6 -1.6 hypothetical protein compare
Psyr_1934 -0.6 -2.8 conserved hypothetical protein compare
Psyr_4118 -0.6 -2.6 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal compare
Psyr_3946 -0.6 -1.8 Proteobacterial methyltransferase compare
Psyr_2769 -0.6 -2.3 conserved hypothetical protein compare
Psyr_2430 -0.6 -2.8 NUDIX hydrolase compare
Psyr_0060 -0.6 -2.4 Protein of unknown function DUF513 compare
Psyr_1196 -0.6 -2.0 type III secretion protein HrpD compare
Psyr_3691 -0.6 -3.2 conserved hypothetical protein compare
Psyr_4609 -0.6 -4.5 anthranilate synthase, component I compare
Psyr_3886 -0.6 -0.7 methionyl-tRNA synthetase compare
Psyr_4112 -0.6 -4.2 Protein of unknown function UPF0011 compare
Psyr_1190 -0.6 -2.2 type III transcriptional regulator HrpR compare
Psyr_3368 -0.6 -2.7 Protein of unknown function DUF451 compare
Psyr_2378 -0.6 -2.0 transcriptional regulator, TetR family compare
Psyr_2824 -0.6 -2.4 conserved hypothetical protein compare
Psyr_4361 -0.6 -1.5 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 compare
Psyr_2738 -0.6 -2.6 regulatory protein, LysR compare
Psyr_0033 -0.6 -0.7 tryptophan synthase, alpha chain compare
Psyr_1903 -0.6 -1.8 conserved hypothetical protein compare
Psyr_2347 -0.6 -0.9 hypothetical protein compare
Psyr_0680 -0.6 -2.2 DNA helicase/exodeoxyribonuclease V, gamma subunit compare
Psyr_1816 -0.6 -1.9 transcriptional regulator, GntR family compare
Psyr_0603 -0.6 -2.8 N-acylglucosamine 2-epimerase compare
Psyr_4015 -0.6 -1.1 conserved domain protein compare
Psyr_4967 -0.6 -1.9 conserved hypothetical protein compare
Psyr_4278 -0.6 -1.3 regulatory protein, LuxR compare
Psyr_1973 -0.6 -1.1 Aspartate transaminase compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Methyl 6-Hydroxyangolensate across organisms