Experiment set11IT089 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Methyl 6-Hydroxyangolensate 10 mM

200 most detrimental genes:

  gene name fitness t score description  
Psyr_2767 +1.1 2.7 Glycoside hydrolase, family 19 compare
Psyr_4224 +0.9 1.9 conserved hypothetical protein compare
Psyr_0623 +0.8 2.5 Peptidase S24, S26A and S26B compare
Psyr_4789 +0.8 2.9 lipoprotein, putative compare
Psyr_2264 +0.7 1.8 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_1247 +0.7 1.5 conserved hypothetical protein compare
Psyr_2223 +0.7 1.1 sarcosine oxidase, delta subunit compare
Psyr_0037 +0.7 1.3 Protein of unknown function DUF1458 compare
Psyr_4335 +0.7 1.9 transcriptional regulator, AsnC family compare
Psyr_2830 +0.7 1.4 conserved hypothetical protein compare
Psyr_2733 +0.7 1.8 Short-chain dehydrogenase/reductase SDR compare
Psyr_1881 +0.7 2.8 conserved hypothetical protein compare
Psyr_1733 +0.7 1.4 Peptidyl-prolyl cis-trans isomerase, cyclophilin type compare
Psyr_2586 +0.7 2.9 Drug resistance transporter EmrB/QacA subfamily compare
Psyr_1104 +0.7 2.6 Heme oxygenase compare
Psyr_4673 +0.7 2.0 Coenzyme PQQ synthesis D compare
Psyr_3111 +0.6 2.8 transcriptional regulator, LysR family compare
Psyr_4116 +0.6 1.6 Transport-associated protein compare
Psyr_3676 +0.6 2.4 adenosylcobyric acid synthase (glutamine-hydrolysing) compare
Psyr_0635 +0.6 1.6 MaoC-like dehydratase compare
Psyr_4151 +0.6 1.2 Phosphocarrier HPr protein compare
Psyr_2340 +0.6 2.1 Peptidylprolyl isomerase, FKBP-type compare
Psyr_0436 +0.6 1.6 Phosphopantetheine-binding protein compare
Psyr_1487 +0.6 2.0 conserved hypothetical protein compare
Psyr_0441 +0.6 1.5 conserved hypothetical protein compare
Psyr_3006 +0.6 2.5 Protein of unknown function DUF419 compare
Psyr_3142 +0.6 1.3 general secretion pathway protein N, putative compare
Psyr_5036 +0.6 1.5 Response regulator receiver compare
Psyr_4466 +0.6 2.6 Thioredoxin compare
Psyr_3433 +0.6 2.7 Protein-glutamate methylesterase compare
Psyr_3596 +0.6 1.7 Selenoprotein W-related protein compare
Psyr_3597 +0.6 1.2 ABC transporter compare
Psyr_2679 +0.6 2.2 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3195 +0.6 1.9 NolW-like protein compare
Psyr_4144 +0.6 1.3 Protein of unknown function DUF1239 compare
Psyr_1807 +0.6 1.8 Allantoicase compare
Psyr_4336 +0.6 1.7 ribosomal large subunit pseudouridine synthase E compare
Psyr_3555 +0.6 1.1 aspartate kinase compare
Psyr_2680 +0.6 2.1 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1377 +0.6 1.8 CinA, C-terminal compare
Psyr_0791 +0.6 0.6 MOSC compare
Psyr_0674 +0.6 1.4 Protein of unknown function UPF0029 compare
Psyr_1717 +0.5 1.0 TPR repeat:von Willebrand factor, type A compare
Psyr_2121 +0.5 2.4 regulatory protein, LysR:LysR, substrate-binding protein compare
Psyr_2872 +0.5 1.1 hypothetical protein compare
Psyr_1447 +0.5 0.8 conserved hypothetical protein compare
Psyr_0248 +0.5 1.9 conserved hypothetical protein compare
Psyr_4300 +0.5 1.2 DNA polymerase III, epsilon subunit compare
Psyr_1955 +0.5 1.7 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_3673 +0.5 1.1 Phosphoglycerate/bisphosphoglycerate mutase compare
Psyr_1948 +0.5 1.8 ABC transporter, periplasmic substrate-binding protein, putative compare
Psyr_2051 +0.5 2.0 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_2487 +0.5 1.8 Short-chain dehydrogenase/reductase SDR compare
Psyr_2538 +0.5 1.3 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3688 +0.5 1.0 conserved hypothetical protein compare
Psyr_2209 +0.5 1.4 ABC transporter, substrate-binding protein, aliphatic sulfonate compare
Psyr_1997 +0.5 2.1 amino acid ABC transporter substrate-binding protein, PAAT family compare
Psyr_0979 +0.5 1.4 conserved hypothetical protein compare
Psyr_3358 +0.5 1.0 transmembrane pair compare
Psyr_3367 +0.5 1.6 Iron permease FTR1 compare
Psyr_3117 +0.5 1.9 lipoprotein, putative compare
Psyr_2449 +0.5 1.7 Response regulator receiver compare
Psyr_2741 +0.5 2.3 Beta-lactamase compare
Psyr_0231 +0.5 1.4 conserved hypothetical protein compare
Psyr_2952 +0.5 2.0 NADP oxidoreductase, coenzyme F420-dependent compare
Psyr_3233 +0.5 2.0 FMN reductase compare
Psyr_1888 +0.5 2.2 CDS compare
Psyr_4736 +0.5 1.7 conserved hypothetical protein compare
Psyr_2081 +0.5 2.2 conserved hypothetical protein compare
Psyr_1013 +0.5 1.3 hypothetical protein compare
Psyr_1616 +0.5 0.8 Rieske [2Fe-2S] region compare
Psyr_4577 +0.5 2.1 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp compare
Psyr_0140 +0.5 2.7 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2292 +0.5 1.3 L-glutaminase compare
Psyr_1391 +0.5 2.8 GCN5-related N-acetyltransferase compare
Psyr_4582 +0.5 0.7 hypothetical protein compare
Psyr_3288 +0.5 1.6 conserved hypothetical protein compare
Psyr_2543 +0.5 0.7 conserved hypothetical protein compare
Psyr_2402 +0.5 1.5 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_1294 +0.4 1.4 regulatory protein, LuxR:Response regulator receiver compare
Psyr_3480 +0.4 1.6 Flagellar basal-body rod protein FlgC compare
Psyr_0633 +0.4 1.9 conserved hypothetical protein compare
Psyr_1039 +0.4 1.1 FecR protein compare
Psyr_1786 +0.4 1.7 membrane protein, putative compare
Psyr_3312 +0.4 1.3 transcriptional regulator, LysR family compare
Psyr_4077 +0.4 1.4 Methylated-DNA-[protein]-cysteine S-methyltransferase compare
Psyr_1269 +0.4 1.6 phosphoribosylformylglycinamidine synthase compare
Psyr_4396 +0.4 1.6 TPR repeat protein compare
Psyr_2717 +0.4 1.6 Antibiotic biosynthesis monooxygenase compare
Psyr_3299 +0.4 2.0 two component transcriptional regulator, LuxR family compare
Psyr_2781 +0.4 0.8 hypothetical protein compare
Psyr_0199 +0.4 1.5 Glutathione-dependent formaldehyde-activating, GFA compare
Psyr_2926 +0.4 2.1 General substrate transporter:Major facilitator superfamily compare
Psyr_0299 +0.4 1.4 transcriptional regulator, GntR family compare
Psyr_0966 +0.4 2.2 Conserved hypothetical protein YfcH compare
Psyr_2228 +0.4 1.8 conserved hypothetical protein compare
Psyr_3229 +0.4 2.7 Glycosyl transferase, group 1 compare
Psyr_2497 +0.4 1.3 lipoprotein, putative compare
Psyr_3004 +0.4 1.3 transcriptional regulator, LysR family compare
Psyr_1499 +0.4 1.1 Protein of unknown function DUF compare
Psyr_1999 +0.4 1.4 OmpA/MotB compare
Psyr_1815 +0.4 2.0 Ferredoxin:Molybdopterin dehydrogenase, FAD-binding:[2Fe-2S]-binding:CO dehydrogenase flavoprotein, C-terminal compare
Psyr_2524 +0.4 1.8 conserved hypothetical protein compare
Psyr_3988 +0.4 2.0 conserved hypothetical protein compare
Psyr_4671 +0.4 2.3 coenzyme PQQ synthesis protein B compare
Psyr_2878 +0.4 1.7 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer compare
Psyr_3548 +0.4 1.8 Glutathione S-transferase, N-terminal compare
Psyr_3591 +0.4 1.2 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_2681 +0.4 2.2 gamma-glutamyltransferase 2, Threonine peptidase, MEROPS family T03 compare
Psyr_4404 +0.4 1.2 tRNA-U20-dihydrouridine synthase compare
Psyr_2057 +0.4 1.5 acyl-CoA thioesterase II, putative compare
Psyr_2374 +0.4 2.6 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_2557 +0.4 0.9 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase-like protein compare
Psyr_5029 +0.4 0.7 Rubredoxin-type Fe(Cys)4 protein compare
Psyr_3852 +0.4 1.2 lipoprotein SlyB, putative compare
Psyr_1939 +0.4 2.2 PAS compare
Psyr_1585 +0.4 2.4 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal compare
Psyr_0885 +0.4 0.6 conserved hypothetical protein compare
Psyr_1595 +0.4 2.2 Protein of unknown function DUF1232 compare
Psyr_4391 +0.4 1.5 type II and III secretion system protein compare
Psyr_3135 +0.4 1.1 transcriptional regulator, GntR family compare
Psyr_4693 +0.4 1.9 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2256 +0.4 1.3 ABC transporter compare
Psyr_3394 +0.4 1.7 conserved hypothetical protein compare
Psyr_2531 +0.4 1.2 transcriptional regulator, LysR family compare
Psyr_3210 +0.4 2.1 Protein of unknown function UPF0118 compare
Psyr_1809 +0.4 1.2 Polysaccharide deacetylase compare
Psyr_1820 +0.4 1.8 conserved hypothetical protein compare
Psyr_2984 +0.4 1.1 conserved hypothetical protein compare
Psyr_0453 +0.4 1.7 16S rRNA m(3)U-1498 methyltransferase compare
Psyr_4692 +0.4 1.8 ABC transporter compare
Psyr_5064 +0.4 1.4 transcriptional regulator, RpiR family compare
Psyr_3483 +0.4 2.4 Cyanase compare
Psyr_2124 +0.4 1.8 Benzoate transport compare
Psyr_3022 +0.4 0.8 transcriptional regulator, AsnC family compare
Psyr_1222 +0.4 1.1 CDS compare
Psyr_3777 +0.4 1.4 conserved hypothetical protein compare
Psyr_2866 +0.4 1.7 Secretion protein HlyD compare
Psyr_1683 +0.4 1.8 conserved hypothetical protein compare
Psyr_3044 +0.4 1.7 Paraquat-inducible protein A compare
Psyr_4660 +0.4 1.4 Formate/nitrite transporter compare
Psyr_1405 +0.4 1.5 hypothetical protein compare
Psyr_3701 +0.4 0.8 thioredoxin, putative compare
Psyr_1274 +0.4 1.0 transferase hexapeptide repeat protein compare
Psyr_2148 +0.4 2.2 Deoxyribonuclease I compare
Psyr_3479 +0.4 1.7 Flagellar hook capping protein compare
Psyr_1600 +0.4 1.5 Zinc-containing alcohol dehydrogenase superfamily compare
Psyr_0751 +0.4 1.5 ISPs1, transposase OrfB compare
Psyr_1601 +0.4 2.1 HAD-superfamily hydrolase, subfamily IB (PSPase-like):HAD-superfamily subfamily IB hydrolase, hypothetical 2 compare
Psyr_2337 +0.4 1.0 conserved hypothetical protein compare
Psyr_2903 +0.4 1.4 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1728 +0.4 1.5 tRNA--hydroxylase compare
Psyr_1624 +0.4 1.1 transcriptional regulator, MarR family compare
Psyr_4860 +0.4 0.8 Integrase, catalytic region compare
Psyr_2215 +0.4 2.0 CheW-like protein compare
Psyr_0998 +0.4 1.4 Isochorismatase hydrolase compare
Psyr_2478 +0.4 1.8 surface antigen (D15):Surface antigen variable number compare
Psyr_1202 +0.4 1.1 negative regulator of hrp expression HrpV compare
Psyr_1871 +0.4 1.7 Transglutaminase-like protein compare
Psyr_0148 +0.4 1.1 hypothetical protein compare
Psyr_2858 +0.4 1.8 2OG-Fe(II) oxygenase superfamily compare
Psyr_4440 +0.4 1.3 Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_1800 +0.4 1.2 transcriptional regulator, LysR family compare
Psyr_4479 +0.3 1.4 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase compare
Psyr_3672 +0.3 1.2 cobalamin-5'-phosphate synthase compare
Psyr_0787 +0.3 1.9 Sulfate transporter/antisigma-factor antagonist STAS compare
Psyr_1839 +0.3 1.2 Benzoate membrane transport protein compare
Psyr_2930 +0.3 0.7 Glyoxalase/bleomycin resistance protein/dioxygenase compare
Psyr_2597 +0.3 1.5 diguanylate cyclase/phosphodiesterase compare
Psyr_3518 +0.3 1.6 hypothetical protein compare
Psyr_0822 +0.3 0.9 1-phosphofructokinase compare
Psyr_2563 +0.3 1.0 HAD-superfamily hydrolase, subfamily IIA compare
Psyr_4842 +0.3 2.1 Phosphoenolpyruvate-protein phosphotransferase compare
Psyr_2387 +0.3 1.0 Malate:quinone-oxidoreductase compare
Psyr_2913 +0.3 1.8 transcriptional regulator, LysR family compare
Psyr_1868 +0.3 1.4 hypothetical protein compare
Psyr_2247 +0.3 1.4 ABC transporter compare
Psyr_1937 +0.3 1.1 UspA compare
Psyr_2998 +0.3 1.4 conserved hypothetical protein compare
Psyr_2053 +0.3 1.7 moxR protein, putative compare
Psyr_3844 +0.3 1.3 conserved hypothetical protein compare
Psyr_2537 +0.3 1.1 conserved hypothetical protein compare
Psyr_3824 +0.3 1.7 conserved hypothetical protein compare
Psyr_3224 +0.3 1.5 Low molecular weight phosphotyrosine protein phosphatase compare
Psyr_1040 +0.3 1.4 RNA polymerase sigma factor, ECF subfamily compare
Psyr_4429 +0.3 2.0 ABC transporter compare
Psyr_4001 +0.3 1.0 conserved domain protein compare
Psyr_2528 +0.3 1.1 Polysaccharide deacetylase compare
Psyr_3116 +0.3 1.1 transcriptional regulator, CdaR family compare
Psyr_0746 +0.3 1.2 IS66 Orf2 like protein compare
Psyr_2827 +0.3 1.3 phage-related protein compare
Psyr_4169 +0.3 1.1 4-carboxymuconolactone decarboxylase compare
Psyr_3869 +0.3 1.1 phage repressor protein, Serine peptidase, MEROPS family S24 compare
Psyr_2922 +0.3 1.8 Permease for cytosine/purines, uracil, thiamine, allantoin compare
Psyr_3995 +0.3 1.2 Helix-turn-helix, Fis-type compare
Psyr_3343 +0.3 1.6 GCN5-related N-acetyltransferase compare
Psyr_2118 +0.3 1.2 protein of unknown function DUF883 compare
Psyr_0432 +0.3 1.0 conserved hypothetical protein compare
Psyr_3308 +0.3 2.2 Glycosyl transferase, group 1 compare
Psyr_1297 +0.3 1.9 YaeQ compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Methyl 6-Hydroxyangolensate across organisms