Experiment set11IT086 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL

200 most important genes:

  gene name fitness t score description  
BWI76_RS26875 -4.7 -3.0 dipeptide ABC transporter permease DppC compare
BWI76_RS05835 -4.7 -2.6 gamma-glutamyl-phosphate reductase compare
BWI76_RS09645 -4.6 -1.3 thioredoxin-disulfide reductase compare
BWI76_RS26085 -4.4 -2.2 3-dehydroquinate synthase compare
BWI76_RS13560 -4.2 -1.2 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS04305 -4.1 -1.2 molecular chaperone DnaJ compare
BWI76_RS20750 -4.0 -1.1 carboxysome structural protein EutK compare
BWI76_RS07730 -4.0 -1.1 iron-enterobactin transporter membrane protein compare
BWI76_RS23895 -3.8 -1.9 Xaa-Pro aminopeptidase compare
BWI76_RS26620 -3.7 -1.1 Fe-S biogenesis protein NfuA compare
BWI76_RS15660 -3.5 -1.0 hypothetical protein compare
BWI76_RS05200 -3.3 -2.3 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS17720 -3.3 -1.3 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS01200 -3.3 -2.1 diaminopimelate epimerase compare
BWI76_RS09660 -3.2 -2.0 DNA translocase FtsK compare
BWI76_RS08385 -3.2 -3.2 citrate (Si)-synthase compare
BWI76_RS16235 -3.1 -3.6 membrane protein compare
BWI76_RS11235 -3.0 -1.2 hypothetical protein compare
BWI76_RS15290 -3.0 -1.4 transcriptional regulator compare
BWI76_RS05015 -2.9 -2.1 transcriptional regulator compare
BWI76_RS11610 -2.9 -2.5 glutamate dehydrogenase compare
BWI76_RS09970 -2.8 -3.8 porin OmpA compare
BWI76_RS00805 -2.7 -4.6 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS21810 -2.7 -1.8 universal stress protein compare
BWI76_RS25160 -2.7 -1.5 transcription elongation factor GreA compare
BWI76_RS12090 -2.7 -3.0 HNH endonuclease compare
BWI76_RS23265 -2.6 -2.2 hypothetical protein compare
BWI76_RS08330 -2.5 -1.4 hypothetical protein compare
BWI76_RS25000 -2.5 -1.0 malonate decarboxylase acyl carrier protein compare
BWI76_RS18930 -2.4 -3.9 histidinol-phosphate transaminase compare
BWI76_RS25480 -2.4 -3.0 ribonuclease E/G compare
BWI76_RS14755 -2.4 -1.8 SIS domain-containing protein compare
BWI76_RS26075 -2.4 -3.0 DNA adenine methylase compare
BWI76_RS10835 -2.4 -1.6 hypothetical protein compare
BWI76_RS14170 -2.3 -2.9 hypothetical protein compare
BWI76_RS07070 -2.3 -3.0 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS06530 -2.3 -5.2 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS04715 -2.3 -1.5 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS20380 -2.3 -1.1 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS08535 -2.3 -1.9 translocation protein TolB compare
BWI76_RS08525 -2.3 -3.5 colicin transporter compare
BWI76_RS13070 -2.3 -2.8 hypothetical protein compare
BWI76_RS17310 -2.2 -3.1 AsnC family transcriptional regulator compare
BWI76_RS14415 -2.2 -2.7 transcriptional regulator, TetR family protein compare
BWI76_RS20360 -2.2 -0.9 cell division protein DedD compare
BWI76_RS17570 -2.2 -2.3 iron-sulfur-binding protein compare
BWI76_RS04515 -2.2 -1.4 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS26405 -2.2 -0.9 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS23050 -2.2 -2.1 cobalt-precorrin-3B C(17)-methyltransferase compare
BWI76_RS21505 -2.2 -1.2 hypothetical protein compare
BWI76_RS06595 -2.2 -1.9 hypothetical protein compare
BWI76_RS18360 -2.2 -1.9 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS03010 -2.1 -6.3 ornithine carbamoyltransferase compare
BWI76_RS23530 -2.1 -2.8 MarR family transcriptional regulator compare
BWI76_RS18575 -2.1 -1.4 transcriptional regulator compare
BWI76_RS25070 -2.1 -1.1 hypothetical protein compare
BWI76_RS18165 -2.0 -1.1 NUDIX pyrophosphatase compare
BWI76_RS15215 -2.0 -1.0 N-acetyltransferase compare
BWI76_RS23230 -2.0 -3.2 exodeoxyribonuclease V subunit beta compare
BWI76_RS27440 -2.0 -3.1 DNA helicase RecG compare
BWI76_RS22805 -2.0 -6.1 GTP diphosphokinase compare
BWI76_RS05260 -2.0 -1.5 chaperone compare
BWI76_RS04470 -2.0 -6.2 carbamoyl phosphate synthase large subunit compare
BWI76_RS01655 -2.0 -4.2 homoserine O-succinyltransferase compare
BWI76_RS26570 -2.0 -2.3 anion permease compare
BWI76_RS27820 -1.9 -1.5 ilvB operon leader peptide IvbL compare
BWI76_RS07380 -1.9 -1.8 hypothetical protein compare
BWI76_RS09130 -1.9 -2.6 biofilm formation regulatory protein BssR compare
BWI76_RS15825 -1.8 -2.0 hypothetical protein compare
BWI76_RS25320 -1.8 -5.1 glutamate synthase compare
BWI76_RS16035 -1.8 -2.2 biotin-independent malonate decarboxylase subunit beta compare
BWI76_RS27430 -1.8 -0.7 (p)ppGpp synthetase compare
BWI76_RS16000 -1.8 -1.0 multidrug transporter subunit MdtI compare
BWI76_RS17200 -1.8 -1.2 hypothetical protein compare
BWI76_RS05840 -1.8 -2.5 glutamate 5-kinase compare
BWI76_RS08605 -1.7 -2.3 phosphoglyceromutase compare
BWI76_RS04250 -1.7 -3.6 homoserine kinase compare
BWI76_RS05235 -1.7 -0.9 hypothetical protein compare
BWI76_RS11965 -1.7 -2.0 orotidine-5'-phosphate decarboxylase compare
BWI76_RS11855 -1.7 -5.0 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS01185 -1.7 -1.6 adenylate cyclase compare
BWI76_RS01110 -1.7 -2.2 TDP-fucosamine acetyltransferase compare
BWI76_RS06485 -1.6 -1.7 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS11850 -1.6 -6.7 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS21350 -1.6 -2.8 anti-RNA polymerase sigma factor SigE compare
BWI76_RS11860 -1.6 -4.2 anthranilate synthase component I compare
BWI76_RS01385 -1.6 -2.4 potassium transporter compare
BWI76_RS25280 -1.6 -1.4 RNase adaptor protein RapZ compare
BWI76_RS23920 -1.6 -4.0 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS19775 -1.6 -1.7 phage resistance protein compare
BWI76_RS26270 -1.6 -2.7 N-acetyltransferase compare
BWI76_RS12040 -1.6 -1.0 hypothetical protein compare
BWI76_RS00140 -1.6 -0.8 phosphate transport system regulator PhoU compare
BWI76_RS01610 -1.6 -4.5 phosphoribosylamine--glycine ligase compare
BWI76_RS21580 -1.6 -1.3 SsrA-binding protein compare
BWI76_RS11845 -1.6 -2.3 tryptophan synthase subunit beta compare
BWI76_RS04160 -1.6 -3.7 phosphoserine phosphatase compare
BWI76_RS20880 -1.6 -1.3 esterase compare
BWI76_RS00850 -1.6 -5.6 acetylglutamate kinase compare
BWI76_RS06605 -1.6 -3.9 ammonium transporter compare
BWI76_RS09755 -1.6 -3.9 phosphoserine transaminase compare
BWI76_RS16425 -1.5 -1.8 hypothetical protein compare
BWI76_RS26395 -1.5 -3.3 cell division protein FtsE compare
BWI76_RS16260 -1.5 -1.2 two-component sensor histidine kinase compare
BWI76_RS18780 -1.5 -1.5 D-alanyl-D-alanine carboxypeptidase compare
BWI76_RS15350 -1.5 -0.9 hypothetical protein compare
BWI76_RS18925 -1.5 -2.8 histidinol dehydrogenase compare
BWI76_RS25315 -1.5 -6.4 glutamate synthase large subunit compare
BWI76_RS18935 -1.5 -2.8 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS15115 -1.5 -4.7 MFS transporter compare
BWI76_RS02530 -1.5 -1.3 tRNA dimethylallyltransferase compare
BWI76_RS24285 -1.5 -4.1 cystathionine beta-lyase compare
BWI76_RS23220 -1.5 -3.8 amino-acid N-acetyltransferase compare
BWI76_RS17530 -1.5 -2.0 hypothetical protein compare
BWI76_RS21465 -1.5 -3.0 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS08750 -1.5 -1.0 kinase inhibitor compare
BWI76_RS26455 -1.5 -1.6 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS00855 -1.5 -4.1 argininosuccinate lyase compare
BWI76_RS14625 -1.4 -1.1 protein TolA compare
BWI76_RS09450 -1.4 -1.4 30S ribosomal protein S6--L-glutamate ligase compare
BWI76_RS14410 -1.4 -2.4 hypothetical protein compare
BWI76_RS01615 -1.4 -4.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS18955 -1.4 -3.1 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS26045 -1.4 -1.6 nitrite reductase small subunit compare
BWI76_RS18550 -1.4 -0.9 tRNA-Asn compare
BWI76_RS27940 -1.4 -1.8 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
BWI76_RS09910 -1.4 -8.7 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS21345 -1.4 -1.5 sigma-E factor regulatory protein RseB compare
BWI76_RS15845 -1.4 -0.8 hypothetical protein compare
BWI76_RS20350 -1.4 -3.5 amidophosphoribosyltransferase compare
BWI76_RS04245 -1.4 -5.0 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS23880 -1.4 -4.3 Aminomethyltransferase (EC 2.1.2.10) (from data) compare
BWI76_RS10280 -1.4 -3.5 polar amino acid ABC transporter permease compare
BWI76_RS26520 -1.4 -2.5 nickel import ATP-binding protein NikE compare
BWI76_RS03655 -1.4 -3.7 hypothetical protein compare
BWI76_RS01210 -1.4 -1.1 tyrosine recombinase XerC compare
BWI76_RS18950 -1.4 -2.5 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS08180 -1.4 -5.5 asparagine synthase B compare
BWI76_RS15975 -1.4 -0.8 hypothetical protein compare
BWI76_RS23250 -1.4 -1.4 hypothetical protein compare
BWI76_RS00385 -1.3 -4.2 nitrogen assimilation regulatory protein compare
BWI76_RS02580 -1.3 -0.9 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS07255 -1.3 -2.0 hypothetical protein compare
BWI76_RS10945 -1.3 -1.7 SecY/SecA suppressor protein compare
BWI76_RS07065 -1.3 -3.4 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS04255 -1.3 -5.1 threonine synthase compare
BWI76_RS02995 -1.3 -3.6 aspartate carbamoyltransferase compare
BWI76_RS27460 -1.3 -2.0 hypothetical protein compare
BWI76_RS17765 -1.3 -1.9 hypothetical protein compare
BWI76_RS06475 -1.3 -1.0 protoheme IX farnesyltransferase compare
BWI76_RS03920 -1.3 -1.8 N-acetyltransferase compare
BWI76_RS23365 -1.3 -4.2 LysR family transcriptional regulator compare
BWI76_RS00835 -1.3 -5.9 phosphoenolpyruvate carboxylase compare
BWI76_RS04510 -1.3 -1.0 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS21570 -1.3 -1.5 RnfH family protein compare
BWI76_RS19845 -1.3 -3.0 phosphatase compare
BWI76_RS22690 -1.3 -1.8 adenylyl-sulfate kinase compare
BWI76_RS17920 -1.3 -1.7 23S rRNA (guanine(745)-N(1))-methyltransferase compare
BWI76_RS20995 -1.3 -2.6 RNA degradosome polyphosphate kinase compare
BWI76_RS20895 -1.3 -2.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS15295 -1.2 -3.3 MDR efflux pump AcrAB transcriptional activator MarA compare
BWI76_RS09480 -1.2 -2.6 hypothetical protein compare
BWI76_RS08615 -1.2 -3.0 galactokinase compare
BWI76_RS18125 -1.2 -1.5 murein DD-endopeptidase MepM compare
BWI76_RS25425 -1.2 -0.9 arginine repressor compare
BWI76_RS20390 -1.2 -0.9 erythronate-4-phosphate dehydrogenase compare
BWI76_RS00845 -1.2 -4.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS19325 -1.2 -0.9 mandelate racemase compare
BWI76_RS16490 -1.2 -1.4 glutaredoxin compare
BWI76_RS22765 -1.2 -4.5 sulfite reductase subunit alpha compare
BWI76_RS00980 -1.2 -5.6 PLP-dependent threonine dehydratase compare
BWI76_RS19035 -1.2 -4.0 dTDP-rhamnosyl transferase compare
BWI76_RS27305 -1.2 -2.9 glycosyl transferase compare
BWI76_RS25285 -1.2 -0.7 HPr family phosphocarrier protein compare
BWI76_RS20435 -1.2 -0.8 chorismate synthase compare
BWI76_RS17195 -1.2 -1.5 hypothetical protein compare
BWI76_RS06800 -1.2 -0.7 DUF2496 domain-containing protein compare
BWI76_RS15940 -1.2 -0.9 DMSO reductase maturation protein DsmD compare
BWI76_RS11335 -1.2 -1.1 tautomerase compare
BWI76_RS19985 -1.2 -2.1 MFS transporter compare
BWI76_RS21265 -1.2 -5.8 phosphoribosylformylglycinamidine synthase compare
BWI76_RS22760 -1.1 -3.4 sulfite reductase subunit beta compare
BWI76_RS14305 -1.1 -2.8 metallophosphoesterase compare
BWI76_RS01205 -1.1 -1.1 DUF484 family protein compare
BWI76_RS24600 -1.1 -2.9 dihydroxyacetone kinase compare
BWI76_RS00390 -1.1 -2.1 two-component system sensor histidine kinase NtrB compare
BWI76_RS00965 -1.1 -0.7 acetolactate synthase 2 small subunit compare
BWI76_RS10655 -1.1 -1.4 [formate-C-acetyltransferase]-activating enzyme compare
BWI76_RS09140 -1.1 -1.9 glutathione S-transferase compare
BWI76_RS23885 -1.1 -0.8 2-octaprenylphenol hydroxylase compare
BWI76_RS21140 -1.1 -1.2 molecular chaperone HscA compare
BWI76_RS14240 -1.1 -2.3 thiol reductase thioredoxin compare
BWI76_RS09505 -1.1 -1.8 arginine transporter permease subunit ArtM compare
BWI76_RS21565 -1.1 -0.7 outer membrane protein assembly factor BamE compare
BWI76_RS11490 -1.1 -2.1 MltA-interacting protein MipA compare
BWI76_RS27385 -1.1 -2.9 orotate phosphoribosyltransferase compare
BWI76_RS09725 -1.1 -1.6 MurR/RpiR family transcriptional regulator compare
BWI76_RS22755 -1.1 -3.2 phosphoadenosine phosphosulfate reductase compare
BWI76_RS23240 -1.1 -1.9 exonuclease V subunit gamma compare
BWI76_RS27550 -1.1 -1.9 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in ecofab experiments