Experiment set11IT079 for Paraburkholderia graminis OAS925

Compare to:

biofilm; planktonic cells from 96 well plate assay in R2A with C30 compound

Group: biofilm
Media: + Time0_Wash=None; Attachment_time=48hrs; Attachment_surface=Wells_of_96well_deepwell_plate; Biofilm_growth_time=48hrs; Biofilm_growth_media=R2A_with_C30; Sample_type=planktonic; Outgrowth=None
Culturing: Burkholderia_OAS925_ML2, Aerobic, at 30 (C)
By: Marta Torres on 26-Aug-21

Specific Phenotypes

For 7 genes in this experiment

For biofilm Time0_Wash=None; Attachment_time=48hrs; Attachment_surface=Wells_of_96well_deepwell_plate; Biofilm_growth_time=48hrs; Biofilm_growth_media=R2A_with_C30; Sample_type=planktonic; Outgrowth=None in Paraburkholderia graminis OAS925

For biofilm Time0_Wash=None; Attachment_time=48hrs; Attachment_surface=Wells_of_96well_deepwell_plate; Biofilm_growth_time=48hrs; Biofilm_growth_media=R2A_with_C30; Sample_type=planktonic; Outgrowth=None across organisms

SEED Subsystems

Subsystem #Specific
Multidrug Resistance Efflux Pumps 3
Multidrug efflux pump in Campylobacter jejuni (CmeABC operon) 2
D-ribose utilization 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
cellulose degradation II (fungi) 3 2 1