Experiment set11IT078 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Xanthyletin 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_0951 -4.4 -4.3 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_1544 -4.1 -4.0 SirA-like protein compare
Psyr_4340 -4.0 -8.5 phosphomethylpyrimidine kinase, putative compare
Psyr_4740 -3.4 -6.4 thiazole-phosphate synthase compare
Psyr_3008 -3.3 -9.2 Undecaprenyl-diphosphatase compare
Psyr_4687 -3.2 -8.0 biotin synthase compare
Psyr_1663 -3.1 -3.7 phosphoribosylanthranilate isomerase compare
Psyr_4203 -3.1 -3.0 SsrA-binding protein compare
Psyr_4686 -2.9 -6.7 8-amino-7-oxononanoate synthase compare
Psyr_1613 -2.9 -5.4 septum site-determining protein MinC compare
Psyr_4341 -2.8 -7.1 thiamine-phosphate diphosphorylase compare
Psyr_4683 -2.7 -5.1 dethiobiotin synthase compare
Psyr_1556 -2.5 -3.4 hypothetical protein compare
Psyr_3808 -2.5 -2.7 hypothetical protein compare
Psyr_0454 -2.3 -5.9 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_0849 -2.2 -10.3 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_0574 -2.2 -5.7 protease FtsH subunit HflK compare
Psyr_4684 -2.1 -3.6 biotin synthesis protein BioC compare
Psyr_4822 -2.1 -4.7 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_0475 -2.1 -3.1 Protein of unknown function YGGT compare
Psyr_4091 -2.0 -4.1 8-oxo-dGTPase compare
Psyr_5132 -1.9 -3.5 Glucose-inhibited division protein A subfamily compare
Psyr_4580 -1.9 -3.2 anthranilate phosphoribosyltransferase compare
Psyr_0917 -1.9 -10.1 ABC-2 compare
Psyr_0259 -1.8 -4.1 Osmolarity sensor protein envZ compare
Psyr_0918 -1.7 -10.2 ABC transporter compare
Psyr_4991 -1.6 -2.9 hypothetical protein compare
Psyr_4627 -1.5 -2.4 dimethyladenosine transferase compare
Psyr_1907 -1.4 -3.5 GTP cyclohydrolase I compare
Psyr_0565 -1.4 -5.7 Protein of unknown function UPF0126 compare
Psyr_1751 -1.4 -3.9 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_4884 -1.3 -5.3 Rhodanese-like protein compare
Psyr_4786 -1.3 -2.2 hypothetical protein compare
Psyr_4089 -1.3 -5.2 PAS compare
Psyr_2855 -1.3 -3.3 methionine synthase (B12-independent) compare
Psyr_1373 -1.3 -2.3 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_0281 -1.3 -3.7 ABC transporter compare
Psyr_1419 -1.3 -2.9 preQ(0) biosynthesis protein QueC compare
Psyr_2462 -1.2 -4.2 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_2071 -1.2 -2.2 outer membrane lipoprotein OprI compare
Psyr_0575 -1.2 -3.2 protease FtsH subunit HflC compare
Psyr_4136 -1.2 -2.5 BolA-like protein compare
Psyr_0383 -1.2 -1.7 Twin-arginine translocation protein TatB compare
Psyr_0826 -1.2 -5.6 glucose-6-phosphate isomerase compare
Psyr_3684 -1.2 -2.3 NLP/P60 compare
Psyr_1555 -1.2 -3.5 Cobyrinic acid a,c-diamide synthase compare
Psyr_0487 -1.2 -2.4 glutathione synthase compare
Psyr_1930 -1.2 -2.9 hypothetical protein compare
Psyr_1357 -1.2 -4.0 RNase HII compare
Psyr_0014 -1.2 -3.4 lipid A biosynthesis acyltransferase compare
Psyr_2769 -1.1 -3.5 conserved hypothetical protein compare
Psyr_2854 -1.1 -3.6 conserved hypothetical protein compare
Psyr_4940 -1.1 -2.2 3'(2'),5'-bisphosphate nucleotidase compare
Psyr_3954 -1.1 -4.6 GTP-binding protein LepA compare
Psyr_3213 -1.1 -2.8 Propeptide, PepSY amd peptidase M4 compare
Psyr_3581 -1.1 -4.1 ribosomal large subunit pseudouridine synthase B compare
Psyr_1408 -1.1 -2.4 Holliday junction endonuclease RuvC compare
Psyr_0927 -1.1 -4.1 hypothetical protein compare
Psyr_2980 -1.1 -2.8 UDP-glucose pyrophosphorylase compare
Psyr_2848 -1.1 -2.6 hypothetical protein compare
Psyr_4362 -1.1 -1.9 Rare lipoprotein A compare
Psyr_1748 -1.1 -3.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_4464 -1.1 -1.5 lipoprotein, putative compare
Psyr_1667 -1.0 -3.3 Colicin V production protein compare
Psyr_4581 -1.0 -1.5 anthranilate synthase, component II compare
Psyr_3287 -1.0 -1.9 DNA topoisomerase I compare
Psyr_1588 -1.0 -2.8 Putative exonuclease, RdgC compare
Psyr_0184 -1.0 -3.3 Protein of unknown function DUF484 compare
Psyr_3806 -1.0 -4.2 hypothetical protein compare
Psyr_1198 -1.0 -2.2 type III secretion protein HrpF compare
Psyr_1410 -1.0 -2.5 Holliday junction DNA helicase RuvB compare
Psyr_0034 -1.0 -1.1 tryptophan synthase, beta chain compare
Psyr_3090 -1.0 -2.3 hypothetical protein compare
Psyr_5133 -1.0 -3.1 tRNA modification GTPase trmE compare
Psyr_2406 -1.0 -2.2 Flavin reductase-like protein compare
Psyr_2680 -1.0 -2.0 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3854 -1.0 -1.4 OmpA/MotB compare
Psyr_0215 -0.9 -6.3 Exodeoxyribonuclease III xth compare
Psyr_3120 -0.9 -2.4 D-glucarate dehydratase compare
Psyr_2488 -0.9 -2.3 hypothetical protein compare
Psyr_1688 -0.9 -2.4 Protein of unknown function DUF1315 compare
Psyr_0571 -0.9 -2.6 tRNA isopentenyltransferase compare
Psyr_2642 -0.9 -2.9 hypothetical protein compare
Psyr_2847 -0.9 -1.8 hypothetical protein compare
Psyr_1097 -0.9 -2.2 glycine cleavage system H protein compare
Psyr_1350 -0.9 -2.3 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_2887 -0.9 -1.1 Endoribonuclease L-PSP compare
Psyr_4609 -0.9 -6.7 anthranilate synthase, component I compare
Psyr_3179 -0.9 -1.9 DNA translocase FtsK compare
Psyr_1885 -0.9 -2.1 hypothetical protein compare
Psyr_2668 -0.9 -3.0 Helix-turn-helix, Fis-type compare
Psyr_0524 -0.9 -2.6 Lipopolysaccharide kinase compare
Psyr_1212 -0.9 -2.4 type III secretion protein HrpO compare
Psyr_2285 -0.9 -1.8 Twin-arginine translocation pathway signal compare
Psyr_3947 -0.9 -2.2 Methyltransferase, putative compare
Psyr_4093 -0.9 -3.5 glutamate N-acetyltransferase compare
Psyr_4622 -0.8 -3.5 Nucleotidyl transferase compare
Psyr_0493 -0.8 -1.7 CheW-like protein compare
Psyr_5065 -0.8 -5.1 ATP-dependent DNA helicase UvrD compare
Psyr_1404 -0.8 -5.3 Ferritin and Dps compare
Psyr_3208 -0.8 -1.8 NADH dehydrogenase subunit M compare
Psyr_1371 -0.8 -4.1 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_2347 -0.8 -1.8 hypothetical protein compare
Psyr_4804 -0.8 -2.7 conserved hypothetical protein compare
Psyr_2664 -0.8 -4.4 hypothetical protein compare
Psyr_2065 -0.8 -3.0 transcription elongation factor GreB compare
Psyr_RNA61 -0.8 -2.1 tRNA-Gly compare
Psyr_0919 -0.8 -5.6 Chromosome segregation ATPase-like protein compare
Psyr_2641 -0.8 -1.7 hypothetical protein compare
Psyr_0255 -0.8 -1.6 glutamate-cysteine ligase compare
Psyr_4194 -0.8 -2.4 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_1989 -0.8 -3.6 galactonate dehydratase compare
Psyr_2807 -0.8 -1.2 NinB compare
Psyr_2907 -0.8 -2.0 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_4140 -0.8 -1.8 Protein of unknown function DUF140 compare
Psyr_1460 -0.8 -2.9 hypothetical protein compare
Psyr_0528 -0.8 -1.9 Carbamoyltransferase compare
Psyr_0179 -0.8 -2.2 Protein of unknown function DUF1289 compare
Psyr_3952 -0.8 -2.0 conserved hypothetical protein compare
Psyr_1275 -0.8 -2.7 Protein of unknown function DUF1289 compare
Psyr_3807 -0.8 -3.6 hypothetical protein compare
Psyr_1935 -0.8 -3.0 Protein of unknown function DUF796 compare
Psyr_2733 -0.8 -1.5 Short-chain dehydrogenase/reductase SDR compare
Psyr_4112 -0.8 -5.0 Protein of unknown function UPF0011 compare
Psyr_0529 -0.8 -3.4 Glycosyl transferase, group 1 compare
Psyr_1686 -0.7 -2.9 Metallophosphoesterase compare
Psyr_0724 -0.7 -1.1 conserved hypothetical protein compare
Psyr_0941 -0.7 -3.9 Conserved hypothetical protein 92 compare
Psyr_1747 -0.7 -2.5 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_4254 -0.7 -1.6 conserved hypothetical protein compare
Psyr_2327 -0.7 -2.1 GTP cyclohydrolase subunit MoaA compare
Psyr_0535 -0.7 -1.7 toluene tolerance protein, putative compare
Psyr_4566 -0.7 -4.5 Peptidase M23B compare
Psyr_1749 -0.7 -3.9 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_0303 -0.7 -1.9 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_3137 -0.7 -4.4 ATPase compare
Psyr_3419 -0.7 -2.5 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_1975 -0.7 -1.5 Integrase, catalytic region compare
Psyr_2348 -0.7 -1.8 hypothetical protein compare
Psyr_4788 -0.7 -1.8 lipoprotein, putative compare
Psyr_3906 -0.7 -1.5 regulatory protein, DeoR compare
Psyr_4404 -0.7 -1.9 tRNA-U20-dihydrouridine synthase compare
Psyr_4519 -0.7 -4.0 General substrate transporter:Major facilitator superfamily compare
Psyr_4512 -0.7 -3.5 putative phage-related protein compare
Psyr_1953 -0.7 -0.7 conserved hypothetical protein compare
Psyr_1806 -0.7 -2.1 Ureidoglycolate hydrolase compare
Psyr_1193 -0.7 -1.1 type III helper protein HrpZ1 compare
Psyr_5130 -0.7 -3.6 chromosome segregation ATPase compare
Psyr_0579 -0.7 -4.9 RNAse R compare
Psyr_3723 -0.7 -2.2 CDS compare
Psyr_3475 -0.7 -2.6 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_3680 -0.7 -1.8 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase compare
Psyr_4978 -0.7 -2.0 hypothetical protein compare
Psyr_1245 -0.7 -3.5 23S rRNA m(2)A-2503 methyltransferase compare
Psyr_1505 -0.7 -2.0 Protein of unknown function DUF156 compare
Psyr_2346 -0.7 -2.6 conserved hypothetical protein compare
Psyr_3850 -0.7 -2.6 lipoprotein, putative compare
Psyr_0033 -0.7 -0.6 tryptophan synthase, alpha chain compare
Psyr_1250 -0.7 -2.3 conserved hypothetical protein compare
Psyr_3121 -0.7 -1.7 Protein of unknown function DUF1345 compare
Psyr_4118 -0.7 -3.5 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal compare
Psyr_1924 -0.7 -2.3 hypothetical protein compare
Psyr_1553 -0.7 -3.0 hypothetical protein compare
Psyr_4754 -0.7 -1.2 16S rRNA m(2)G-966 methyltransferase compare
Psyr_0648 -0.7 -3.8 transporter, putative compare
Psyr_1832 -0.7 -1.5 Exonuclease compare
Psyr_2264 -0.7 -1.4 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_1277 -0.7 -1.4 formate-dependent phosphoribosylglycinamide formyltransferase compare
Psyr_1268 -0.7 -3.5 extracellular solute-binding protein, family 3:SLT compare
Psyr_0170 -0.6 -1.3 heat shock protein Hsp15 compare
Psyr_0920 -0.6 -5.5 Glycosyl transferase, group 1 compare
Psyr_0857 -0.6 -1.7 [SSU ribosomal protein S18P]-alanine acetyltransferase compare
Psyr_1802 -0.6 -0.9 transcriptional regulator, AsnC family compare
Psyr_3341 -0.6 -2.4 hypothetical protein compare
Psyr_1638 -0.6 -1.8 RNAse E compare
Psyr_3640 -0.6 -1.6 conserved hypothetical protein compare
Psyr_1733 -0.6 -1.1 Peptidyl-prolyl cis-trans isomerase, cyclophilin type compare
Psyr_0680 -0.6 -2.4 DNA helicase/exodeoxyribonuclease V, gamma subunit compare
Psyr_2918 -0.6 -2.5 3-hydroxyacyl-CoA dehydrogenase, C-terminal:3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein compare
Psyr_4351 -0.6 -2.4 conserved domain protein compare
Psyr_2251 -0.6 -1.4 Phosphonate metabolism PhnG compare
Psyr_0406 -0.6 -2.5 Pilus assembly protein, PilQ compare
Psyr_2456 -0.6 -1.6 Short-chain dehydrogenase/reductase SDR compare
Psyr_2520 -0.6 -1.4 SOS-response transcriptional repressor, LexA compare
Psyr_4019 -0.6 -2.2 H-NS family protein MvaT compare
Psyr_2405 -0.6 -3.0 transcriptional regulator, GntR family compare
Psyr_0377 -0.6 -3.5 Periplasmic glucan biosynthesis protein, MdoG compare
Psyr_2092 -0.6 -1.9 Protein of unknown function 1935 compare
Psyr_4309 -0.6 -2.7 hypothetical protein compare
Psyr_3809 -0.6 -2.5 hypothetical protein compare
Psyr_1910 -0.6 -2.0 VacJ-like lipoprotein compare
Psyr_3665 -0.6 -2.0 conserved hypothetical protein compare
Psyr_0638 -0.6 -1.5 Peptidase S16, lon N-terminal compare
Psyr_2184 -0.6 -1.5 Short-chain dehydrogenase/reductase SDR compare
Psyr_3728 -0.6 -2.4 hypothetical protein compare
Psyr_2770 -0.6 -3.3 tail fiber domain protein compare
Psyr_0319 -0.6 -2.8 conserved hypothetical protein compare
Psyr_2345 -0.6 -2.8 ea59 protein compare
Psyr_3104 -0.6 -1.4 phosphate ABC transporter membrane protein 2, PhoT family compare
Psyr_2114 -0.6 -2.4 two component transcriptional regulator, LuxR family compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Xanthyletin across organisms