Experiment set11IT075 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Peucenin 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_1544 -4.3 -3.0 SirA-like protein compare
Psyr_4686 -3.4 -5.6 8-amino-7-oxononanoate synthase compare
Psyr_0951 -3.4 -4.4 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4340 -3.4 -9.4 phosphomethylpyrimidine kinase, putative compare
Psyr_4740 -3.3 -5.8 thiazole-phosphate synthase compare
Psyr_0383 -3.2 -3.1 Twin-arginine translocation protein TatB compare
Psyr_1613 -3.2 -4.8 septum site-determining protein MinC compare
Psyr_3008 -2.9 -8.4 Undecaprenyl-diphosphatase compare
Psyr_0475 -2.8 -1.9 Protein of unknown function YGGT compare
Psyr_4684 -2.7 -3.6 biotin synthesis protein BioC compare
Psyr_4687 -2.7 -7.1 biotin synthase compare
Psyr_4203 -2.5 -2.8 SsrA-binding protein compare
Psyr_1556 -2.4 -3.2 hypothetical protein compare
Psyr_0849 -2.4 -9.8 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_2807 -2.3 -2.0 NinB compare
Psyr_4683 -2.3 -4.5 dethiobiotin synthase compare
Psyr_0454 -2.3 -5.5 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_4341 -2.2 -6.5 thiamine-phosphate diphosphorylase compare
Psyr_1663 -2.1 -3.8 phosphoribosylanthranilate isomerase compare
Psyr_0918 -2.0 -12.1 ABC transporter compare
Psyr_4627 -1.9 -2.8 dimethyladenosine transferase compare
Psyr_4580 -1.9 -3.0 anthranilate phosphoribosyltransferase compare
Psyr_0574 -1.9 -5.2 protease FtsH subunit HflK compare
Psyr_0493 -1.8 -4.1 CheW-like protein compare
Psyr_0549 -1.8 -3.0 Metallophosphoesterase compare
Psyr_0575 -1.7 -3.7 protease FtsH subunit HflC compare
Psyr_4091 -1.7 -4.2 8-oxo-dGTPase compare
Psyr_1907 -1.6 -3.2 GTP cyclohydrolase I compare
Psyr_4884 -1.6 -5.8 Rhodanese-like protein compare
Psyr_0917 -1.6 -8.7 ABC-2 compare
Psyr_2641 -1.6 -3.4 hypothetical protein compare
Psyr_0259 -1.4 -3.3 Osmolarity sensor protein envZ compare
Psyr_4089 -1.4 -5.2 PAS compare
Psyr_0565 -1.4 -5.6 Protein of unknown function UPF0126 compare
Psyr_5132 -1.4 -2.8 Glucose-inhibited division protein A subfamily compare
Psyr_RNA61 -1.4 -2.6 tRNA-Gly compare
Psyr_0487 -1.4 -2.5 glutathione synthase compare
Psyr_1748 -1.4 -5.0 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_0826 -1.4 -5.5 glucose-6-phosphate isomerase compare
Psyr_4362 -1.4 -3.1 Rare lipoprotein A compare
Psyr_2346 -1.4 -4.0 conserved hypothetical protein compare
Psyr_4822 -1.3 -3.0 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_1408 -1.3 -3.1 Holliday junction endonuclease RuvC compare
Psyr_2854 -1.3 -4.4 conserved hypothetical protein compare
Psyr_3090 -1.3 -2.5 hypothetical protein compare
Psyr_0282 -1.3 -4.5 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0571 -1.3 -3.0 tRNA isopentenyltransferase compare
Psyr_4622 -1.2 -4.5 Nucleotidyl transferase compare
Psyr_2059 -1.2 -2.6 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer compare
Psyr_3808 -1.2 -1.2 hypothetical protein compare
Psyr_5135 -1.2 -2.0 Protein of unknown function DUF37 compare
Psyr_1930 -1.2 -2.4 hypothetical protein compare
Psyr_4991 -1.2 -2.4 hypothetical protein compare
Psyr_2227 -1.2 -1.9 conserved hypothetical protein compare
Psyr_2990 -1.2 -2.9 conserved hypothetical protein compare
Psyr_3954 -1.2 -4.7 GTP-binding protein LepA compare
Psyr_1944 -1.2 -2.9 Thioesterase compare
Psyr_3581 -1.1 -4.8 ribosomal large subunit pseudouridine synthase B compare
Psyr_2769 -1.1 -3.6 conserved hypothetical protein compare
Psyr_3620 -1.1 -2.0 hypothetical protein compare
Psyr_1373 -1.1 -2.4 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_2921 -1.1 -2.5 ADP-ribosylglycohydrolase compare
Psyr_1097 -1.1 -2.1 glycine cleavage system H protein compare
Psyr_3107 -1.1 -2.9 conserved hypothetical protein compare
Psyr_1935 -1.1 -2.8 Protein of unknown function DUF796 compare
Psyr_5029 -1.1 -2.1 Rubredoxin-type Fe(Cys)4 protein compare
Psyr_2823 -1.1 -1.3 hypothetical protein compare
Psyr_3287 -1.0 -1.8 DNA topoisomerase I compare
Psyr_1350 -1.0 -2.7 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_2071 -1.0 -1.1 outer membrane lipoprotein OprI compare
Psyr_2664 -1.0 -4.4 hypothetical protein compare
Psyr_2275 -1.0 -2.8 glutamate synthase (NADPH) GltB3 subunit compare
Psyr_0034 -1.0 -1.0 tryptophan synthase, beta chain compare
Psyr_4278 -1.0 -2.1 regulatory protein, LuxR compare
Psyr_0255 -1.0 -1.4 glutamate-cysteine ligase compare
Psyr_3952 -1.0 -2.4 conserved hypothetical protein compare
Psyr_1460 -1.0 -3.0 hypothetical protein compare
Psyr_2251 -1.0 -2.0 Phosphonate metabolism PhnG compare
Psyr_2594 -1.0 -1.2 unknown conserved protein in bacilli compare
Psyr_4634 -1.0 -1.5 Polynucleotide adenylyltransferase:Metal-dependent phosphohydrolase, HD subdomain protein compare
Psyr_0281 -1.0 -2.9 ABC transporter compare
Psyr_0524 -1.0 -2.7 Lipopolysaccharide kinase compare
Psyr_4118 -1.0 -4.4 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal compare
Psyr_4019 -0.9 -2.6 H-NS family protein MvaT compare
Psyr_0579 -0.9 -5.9 RNAse R compare
Psyr_1783 -0.9 -2.0 CDS compare
Psyr_1747 -0.9 -3.0 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_2642 -0.9 -2.2 hypothetical protein compare
Psyr_1751 -0.9 -2.6 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_5133 -0.9 -2.6 tRNA modification GTPase trmE compare
Psyr_4464 -0.9 -1.3 lipoprotein, putative compare
Psyr_5065 -0.9 -5.1 ATP-dependent DNA helicase UvrD compare
Psyr_3665 -0.9 -2.0 conserved hypothetical protein compare
Psyr_2980 -0.9 -2.4 UDP-glucose pyrophosphorylase compare
Psyr_5130 -0.9 -5.1 chromosome segregation ATPase compare
Psyr_4350 -0.9 -2.0 Protein of unknown function DUF218 compare
Psyr_1910 -0.9 -2.7 VacJ-like lipoprotein compare
Psyr_2847 -0.8 -1.4 hypothetical protein compare
Psyr_3054 -0.8 -3.0 Choline/ethanolamine kinase:Aminoglycoside phosphotransferase compare
Psyr_0215 -0.8 -5.6 Exodeoxyribonuclease III xth compare
Psyr_1941 -0.8 -1.5 ATP-binding region, ATPase-like:Histidine kinase compare
Psyr_2397 -0.8 -1.8 transcriptional regulator, LysR family compare
Psyr_1667 -0.8 -2.9 Colicin V production protein compare
Psyr_2348 -0.8 -1.5 hypothetical protein compare
Psyr_1404 -0.8 -4.6 Ferritin and Dps compare
Psyr_2095 -0.8 -3.2 Conserved TM helix compare
Psyr_3005 -0.8 -1.0 3-oxoadipate enol-lactonase compare
Psyr_2870 -0.8 -1.9 CDS compare
Psyr_2345 -0.8 -2.6 ea59 protein compare
Psyr_4361 -0.8 -2.5 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 compare
Psyr_2601 -0.8 -4.5 regulatory protein, LuxR compare
Psyr_1885 -0.8 -1.7 hypothetical protein compare
Psyr_4136 -0.8 -1.7 BolA-like protein compare
Psyr_2855 -0.8 -2.2 methionine synthase (B12-independent) compare
Psyr_1615 -0.8 -2.8 Patatin compare
Psyr_2842 -0.8 -3.8 hypothetical protein compare
Psyr_3807 -0.8 -3.8 hypothetical protein compare
Psyr_5073 -0.8 -3.4 conserved hypothetical protein compare
Psyr_3346 -0.8 -2.4 conserved hypothetical protein compare
Psyr_3806 -0.8 -2.8 hypothetical protein compare
Psyr_3854 -0.8 -1.2 OmpA/MotB compare
Psyr_1989 -0.8 -3.2 galactonate dehydratase compare
Psyr_2820 -0.8 -1.6 RecT protein compare
Psyr_3199 -0.8 -1.9 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_4087 -0.8 -1.0 Protein of unknown function DUF520 compare
Psyr_3213 -0.8 -1.8 Propeptide, PepSY amd peptidase M4 compare
Psyr_2210 -0.7 -1.9 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein compare
Psyr_2947 -0.7 -2.8 hypothetical protein compare
Psyr_1791 -0.7 -1.8 HAD-superfamily hydrolase, subfamily IA, variant 2 compare
Psyr_0347 -0.7 -2.2 hypothetical protein compare
Psyr_2899 -0.7 -2.2 conserved hypothetical protein compare
Psyr_1688 -0.7 -1.4 Protein of unknown function DUF1315 compare
Psyr_3084 -0.7 -2.5 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_3088 -0.7 -3.0 Glycosyl transferase, group 1 compare
Psyr_4512 -0.7 -3.8 putative phage-related protein compare
Psyr_2190 -0.7 -1.6 NADH:flavin oxidoreductase/NADH oxidase compare
Psyr_2221 -0.7 -1.7 sarcosine oxidase, gamma subunit compare
Psyr_3293 -0.7 -1.4 UspA compare
Psyr_1419 -0.7 -1.8 preQ(0) biosynthesis protein QueC compare
Psyr_1931 -0.7 -2.6 hypothetical protein compare
Psyr_2690 -0.7 -2.4 Glycosyl transferase, family 2 compare
Psyr_4476 -0.7 -3.2 dTDP-4-dehydrorhamnose reductase compare
Psyr_2848 -0.7 -1.9 hypothetical protein compare
Psyr_3305 -0.7 -3.0 Glycosyl transferase, group 1 compare
Psyr_2321 -0.7 -3.5 YD repeat protein compare
Psyr_2617 -0.7 -1.3 Secretion protein HlyD compare
Psyr_4609 -0.7 -5.0 anthranilate synthase, component I compare
Psyr_2561 -0.7 -2.2 hypothetical protein compare
Psyr_3946 -0.7 -2.0 Proteobacterial methyltransferase compare
Psyr_2520 -0.7 -1.4 SOS-response transcriptional repressor, LexA compare
Psyr_2312 -0.7 -1.1 Protein of unknown function DUF24 compare
Psyr_1371 -0.7 -3.5 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_2799 -0.7 -2.9 hypothetical protein compare
Psyr_2973 -0.7 -1.6 Glyoxalase I compare
Psyr_2552 -0.7 -1.7 cyclase/dehydrase compare
Psyr_2398 -0.7 -1.8 ABC transporter compare
Psyr_4699 -0.7 -3.0 Amino acid-binding ACT compare
Psyr_4788 -0.7 -1.2 lipoprotein, putative compare
Psyr_3862 -0.7 -2.2 conserved hypothetical protein compare
Psyr_3616 -0.6 -4.3 Heat shock protein, Metallo peptidase, MEROPS family M48B compare
Psyr_2629 -0.6 -3.4 von Willebrand factor, type A compare
Psyr_2112 -0.6 -1.1 Protein with unknown function DUF469 compare
Psyr_3658 -0.6 -3.9 Rhodanese-like protein compare
Psyr_3137 -0.6 -3.9 ATPase compare
Psyr_0774 -0.6 -2.2 monosaccharide ABC transporter membrane protein, CUT2 family compare
Psyr_3833 -0.6 -2.0 Plasmid stabilization system compare
Psyr_2602 -0.6 -2.6 transcriptional regulator, LuxR family compare
Psyr_3419 -0.6 -2.2 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_2305 -0.6 -2.3 Natural resistance-associated macrophage protein compare
Psyr_2351 -0.6 -2.3 tRNA synthetase, class-II (G, H, P and S) compare
Psyr_3809 -0.6 -2.3 hypothetical protein compare
Psyr_4262 -0.6 -1.2 lipoprotein, putative compare
Psyr_0033 -0.6 -0.7 tryptophan synthase, alpha chain compare
Psyr_1196 -0.6 -1.8 type III secretion protein HrpD compare
Psyr_0394 -0.6 -1.7 Heat shock protein HslU compare
Psyr_2182 -0.6 -2.5 hypothetical protein compare
Psyr_3089 -0.6 -4.8 Hemolysin-type calcium-binding region:hemolysin-type calcium binding related protein compare
Psyr_2874 -0.6 -1.9 monosaccharide ABC transporter membrane protein, CUT2 family compare
Psyr_2140 -0.6 -2.1 conserved hypothetical protein compare
Psyr_3164 -0.6 -3.0 Protein of unknown function UPF0005 compare
Psyr_2180 -0.6 -1.5 transcriptional regulator, LysR family compare
Psyr_1555 -0.6 -1.8 Cobyrinic acid a,c-diamide synthase compare
Psyr_0920 -0.6 -5.1 Glycosyl transferase, group 1 compare
Psyr_2154 -0.6 -2.6 transcriptional regulator, LacI family compare
Psyr_1455 -0.6 -2.0 conserved hypothetical protein compare
Psyr_3208 -0.6 -1.3 NADH dehydrogenase subunit M compare
Psyr_0680 -0.6 -2.2 DNA helicase/exodeoxyribonuclease V, gamma subunit compare
Psyr_2209 -0.6 -1.6 ABC transporter, substrate-binding protein, aliphatic sulfonate compare
Psyr_4051 -0.6 -1.4 transcriptional regulator, ArsR family compare
Psyr_0580 -0.6 -2.1 23S rRNA Gm-2251 2'-O-methyltransferase compare
Psyr_0373 -0.6 -1.6 CDS compare
Psyr_4893 -0.6 -1.4 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_2092 -0.6 -1.8 Protein of unknown function 1935 compare
Psyr_3284 -0.6 -1.8 SOS cell division inhibitor SulA compare
Psyr_4417 -0.6 -1.3 Ferredoxin--nitrite reductase compare
Psyr_0916 -0.6 -3.9 GDP-mannose 4,6-dehydratase compare
Psyr_3958 -0.6 -3.8 RNA polymerase, sigma-24 subunit, RpoE compare
Psyr_0395 -0.6 -1.7 HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B compare
Psyr_0268 -0.6 -0.8 DSBA oxidoreductase compare
Psyr_4519 -0.6 -3.3 General substrate transporter:Major facilitator superfamily compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Peucenin across organisms