Experiment set11IT074 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Cantharidin 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_4340 -3.7 -9.4 phosphomethylpyrimidine kinase, putative compare
Psyr_1544 -3.6 -4.9 SirA-like protein compare
Psyr_4203 -3.5 -2.4 SsrA-binding protein compare
Psyr_1907 -3.3 -4.4 GTP cyclohydrolase I compare
Psyr_3008 -3.3 -9.0 Undecaprenyl-diphosphatase compare
Psyr_4991 -3.2 -3.1 hypothetical protein compare
Psyr_4683 -3.1 -4.7 dethiobiotin synthase compare
Psyr_4740 -2.6 -6.4 thiazole-phosphate synthase compare
Psyr_4634 -2.6 -2.7 Polynucleotide adenylyltransferase:Metal-dependent phosphohydrolase, HD subdomain protein compare
Psyr_4091 -2.5 -6.4 8-oxo-dGTPase compare
Psyr_4687 -2.5 -7.4 biotin synthase compare
Psyr_4580 -2.5 -3.3 anthranilate phosphoribosyltransferase compare
Psyr_0951 -2.5 -3.8 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4341 -2.4 -6.1 thiamine-phosphate diphosphorylase compare
Psyr_1613 -2.4 -5.3 septum site-determining protein MinC compare
Psyr_0849 -2.3 -10.1 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_1663 -2.3 -3.8 phosphoribosylanthranilate isomerase compare
Psyr_0574 -2.2 -6.1 protease FtsH subunit HflK compare
Psyr_0454 -2.2 -6.1 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_5132 -2.1 -3.1 Glucose-inhibited division protein A subfamily compare
Psyr_0917 -1.9 -10.6 ABC-2 compare
Psyr_5135 -1.9 -2.0 Protein of unknown function DUF37 compare
Psyr_4754 -1.9 -3.0 16S rRNA m(2)G-966 methyltransferase compare
Psyr_0918 -1.9 -10.6 ABC transporter compare
Psyr_4686 -1.8 -5.3 8-amino-7-oxononanoate synthase compare
Psyr_4684 -1.7 -3.2 biotin synthesis protein BioC compare
Psyr_4581 -1.7 -3.0 anthranilate synthase, component II compare
Psyr_4627 -1.7 -2.6 dimethyladenosine transferase compare
Psyr_0571 -1.7 -3.8 tRNA isopentenyltransferase compare
Psyr_1408 -1.7 -3.0 Holliday junction endonuclease RuvC compare
Psyr_1748 -1.6 -4.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_0255 -1.6 -2.4 glutamate-cysteine ligase compare
Psyr_1885 -1.6 -2.1 hypothetical protein compare
Psyr_0575 -1.6 -3.5 protease FtsH subunit HflC compare
Psyr_0565 -1.5 -6.4 Protein of unknown function UPF0126 compare
Psyr_0475 -1.5 -2.4 Protein of unknown function YGGT compare
Psyr_4884 -1.5 -5.9 Rhodanese-like protein compare
Psyr_1373 -1.5 -2.6 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_3293 -1.4 -3.2 UspA compare
Psyr_1975 -1.4 -2.5 Integrase, catalytic region compare
Psyr_1930 -1.3 -3.1 hypothetical protein compare
Psyr_3620 -1.3 -1.4 hypothetical protein compare
Psyr_0394 -1.3 -4.2 Heat shock protein HslU compare
Psyr_2769 -1.3 -3.7 conserved hypothetical protein compare
Psyr_3581 -1.3 -5.2 ribosomal large subunit pseudouridine synthase B compare
Psyr_2980 -1.3 -2.9 UDP-glucose pyrophosphorylase compare
Psyr_3867 -1.3 -1.6 hypothetical protein compare
Psyr_1419 -1.2 -2.8 preQ(0) biosynthesis protein QueC compare
Psyr_1556 -1.2 -1.8 hypothetical protein compare
Psyr_0259 -1.2 -2.3 Osmolarity sensor protein envZ compare
Psyr_2141 -1.2 -2.4 hypothetical protein compare
Psyr_2875 -1.1 -2.2 monosaccharide ABC transporter membrane protein, CUT2 family compare
Psyr_2471 -1.1 -1.9 hydroxymethylglutaryl-CoA lyase compare
Psyr_3806 -1.1 -4.5 hypothetical protein compare
Psyr_3886 -1.1 -1.7 methionyl-tRNA synthetase compare
Psyr_1751 -1.1 -3.5 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_2848 -1.1 -3.5 hypothetical protein compare
Psyr_0549 -1.1 -1.2 Metallophosphoesterase compare
Psyr_2462 -1.1 -3.2 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_0487 -1.1 -2.0 glutathione synthase compare
Psyr_2151 -1.0 -1.7 monosaccharide ABC transporter substrate-binding protein, CUT2 family compare
Psyr_0215 -1.0 -6.6 Exodeoxyribonuclease III xth compare
Psyr_2143 -1.0 -2.0 delta1-piperideine 2-carboxylate reductase compare
Psyr_5133 -1.0 -3.0 tRNA modification GTPase trmE compare
Psyr_4822 -1.0 -2.4 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_4362 -1.0 -2.7 Rare lipoprotein A compare
Psyr_4460 -1.0 -1.9 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_4087 -1.0 -1.1 Protein of unknown function DUF520 compare
Psyr_1980 -1.0 -2.9 Heat shock protein Hsp20 compare
Psyr_1667 -1.0 -4.0 Colicin V production protein compare
Psyr_0231 -1.0 -2.0 conserved hypothetical protein compare
Psyr_0493 -1.0 -1.9 CheW-like protein compare
Psyr_4089 -1.0 -3.9 PAS compare
Psyr_3954 -1.0 -3.3 GTP-binding protein LepA compare
Psyr_2915 -1.0 -3.2 transcriptional regulator, AraC family with amidase-like domain protein compare
Psyr_1779 -0.9 -1.8 hypothetical protein compare
Psyr_2899 -0.9 -4.0 conserved hypothetical protein compare
Psyr_0826 -0.9 -4.1 glucose-6-phosphate isomerase compare
Psyr_2562 -0.9 -1.1 hypothetical protein compare
Psyr_3952 -0.9 -2.9 conserved hypothetical protein compare
Psyr_1832 -0.9 -2.1 Exonuclease compare
Psyr_1555 -0.9 -2.6 Cobyrinic acid a,c-diamide synthase compare
Psyr_RNA61 -0.9 -2.6 tRNA-Gly compare
Psyr_2990 -0.9 -2.4 conserved hypothetical protein compare
Psyr_3429 -0.9 -2.3 CheW-like protein compare
Psyr_1931 -0.9 -3.1 hypothetical protein compare
Psyr_0580 -0.9 -3.0 23S rRNA Gm-2251 2'-O-methyltransferase compare
Psyr_3290 -0.9 -2.5 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_1935 -0.9 -3.5 Protein of unknown function DUF796 compare
Psyr_0034 -0.9 -1.2 tryptophan synthase, beta chain compare
Psyr_4335 -0.9 -1.6 transcriptional regulator, AsnC family compare
Psyr_2607 -0.9 -4.0 regulatory protein, LuxR compare
Psyr_1460 -0.9 -2.7 hypothetical protein compare
Psyr_3199 -0.9 -2.1 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_3427 -0.9 -1.6 conserved hypothetical protein compare
Psyr_0579 -0.9 -6.1 RNAse R compare
Psyr_2520 -0.9 -1.7 SOS-response transcriptional repressor, LexA compare
Psyr_2346 -0.9 -2.7 conserved hypothetical protein compare
Psyr_2200 -0.9 -1.8 UreE urease accessory, N-terminal compare
Psyr_3585 -0.9 -2.7 Sua5/YciO/YrdC/YwlC compare
Psyr_4351 -0.9 -3.0 conserved domain protein compare
Psyr_3728 -0.9 -3.5 hypothetical protein compare
Psyr_1791 -0.9 -2.3 HAD-superfamily hydrolase, subfamily IA, variant 2 compare
Psyr_2320 -0.9 -4.1 YD repeat protein compare
Psyr_4361 -0.8 -2.5 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 compare
Psyr_2642 -0.8 -2.3 hypothetical protein compare
Psyr_2347 -0.8 -0.8 hypothetical protein compare
Psyr_3026 -0.8 -2.7 transcriptional regulator, TetR family compare
Psyr_1350 -0.8 -2.8 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_0383 -0.8 -1.1 Twin-arginine translocation protein TatB compare
Psyr_3090 -0.8 -2.0 hypothetical protein compare
Psyr_1953 -0.8 -1.1 conserved hypothetical protein compare
Psyr_3208 -0.8 -1.7 NADH dehydrogenase subunit M compare
Psyr_0281 -0.8 -2.2 ABC transporter compare
Psyr_2180 -0.8 -2.6 transcriptional regulator, LysR family compare
Psyr_3805 -0.8 -1.9 hypothetical protein compare
Psyr_2345 -0.8 -3.2 ea59 protein compare
Psyr_1875 -0.8 -1.6 Enoyl-CoA hydratase/isomerase compare
Psyr_3240 -0.8 -1.9 CTP synthase compare
Psyr_2842 -0.8 -3.9 hypothetical protein compare
Psyr_3889 -0.8 -1.7 conserved hypothetical protein compare
Psyr_1118 -0.8 -2.6 Aldose 1-epimerase compare
Psyr_0491 -0.8 -2.7 chemotaxis sensory transducer compare
Psyr_2921 -0.8 -2.0 ADP-ribosylglycohydrolase compare
Psyr_4609 -0.8 -5.7 anthranilate synthase, component I compare
Psyr_1227 -0.7 -2.0 Queuosine biosynthesis protein compare
Psyr_4194 -0.7 -2.5 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_4136 -0.7 -1.7 BolA-like protein compare
Psyr_3665 -0.7 -2.4 conserved hypothetical protein compare
Psyr_2183 -0.7 -2.4 transcriptional regulator, GntR family compare
Psyr_0025 -0.7 -1.9 shikimate dehydrogenase compare
Psyr_2563 -0.7 -1.9 HAD-superfamily hydrolase, subfamily IIA compare
Psyr_2738 -0.7 -2.8 regulatory protein, LysR compare
Psyr_1749 -0.7 -3.6 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_0282 -0.7 -2.8 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3723 -0.7 -1.9 CDS compare
Psyr_0638 -0.7 -1.1 Peptidase S16, lon N-terminal compare
Psyr_1934 -0.7 -3.1 conserved hypothetical protein compare
Psyr_3795 -0.7 -1.6 hypothetical protein compare
Psyr_3020 -0.7 -1.5 precorrin-4 C11-methyltransferase compare
Psyr_3287 -0.7 -1.4 DNA topoisomerase I compare
Psyr_3466 -0.7 -1.7 Flagellin, C-terminal:Flagellin, N-terminal compare
Psyr_4480 -0.7 -1.5 outer membrane transport energization protein TonB compare
Psyr_1236 -0.7 -2.2 transcriptional regulator, BadM/Rrf2 family compare
Psyr_4051 -0.7 -1.3 transcriptional regulator, ArsR family compare
Psyr_2820 -0.7 -1.7 RecT protein compare
Psyr_4593 -0.7 -1.4 sigma factor domain protein compare
Psyr_2854 -0.7 -1.9 conserved hypothetical protein compare
Psyr_2095 -0.7 -2.6 Conserved TM helix compare
Psyr_1824 -0.7 -1.9 amino acid ABC transporter substrate-binding protein, PAAT family compare
Psyr_2770 -0.7 -3.2 tail fiber domain protein compare
Psyr_4566 -0.7 -4.0 Peptidase M23B compare
Psyr_0941 -0.7 -3.0 Conserved hypothetical protein 92 compare
Psyr_4989 -0.7 -2.3 hypothetical protein compare
Psyr_0923 -0.7 -2.7 hypothetical protein compare
Psyr_2321 -0.7 -3.9 YD repeat protein compare
Psyr_2639 -0.7 -3.5 hypothetical protein compare
Psyr_3933 -0.7 -1.8 conserved hypothetical protein compare
Psyr_2778 -0.7 -1.3 Phage minor tail protein L compare
Psyr_4057 -0.6 -2.3 regulatory protein, LysR:LysR, substrate-binding protein compare
Psyr_4093 -0.6 -2.6 glutamate N-acetyltransferase compare
Psyr_0919 -0.6 -4.2 Chromosome segregation ATPase-like protein compare
Psyr_3202 -0.6 -1.1 NADH dehydrogenase subunit G compare
Psyr_0202 -0.6 -3.6 transcriptional regulator, LysR family compare
Psyr_5129 -0.6 -2.5 chromosome segregation DNA-binding protein compare
Psyr_1371 -0.6 -3.5 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_3439 -0.6 -2.4 GTP-binding signal recognition particle SRP54, G-domain protein compare
Psyr_3164 -0.6 -3.7 Protein of unknown function UPF0005 compare
Psyr_4519 -0.6 -3.5 General substrate transporter:Major facilitator superfamily compare
Psyr_2601 -0.6 -3.4 regulatory protein, LuxR compare
Psyr_1418 -0.6 -1.6 Radical SAM compare
Psyr_1037 -0.6 -1.9 ribosomal subunit interface protein, putative compare
Psyr_1268 -0.6 -3.1 extracellular solute-binding protein, family 3:SLT compare
Psyr_4112 -0.6 -4.1 Protein of unknown function UPF0011 compare
Psyr_1474 -0.6 -3.6 hypothetical protein compare
Psyr_2397 -0.6 -1.7 transcriptional regulator, LysR family compare
Psyr_5050 -0.6 -1.8 transcriptional regulator, LysR family compare
Psyr_1509 -0.6 -3.0 PilM protein, putative compare
Psyr_2558 -0.6 -3.0 hypothetical protein compare
Psyr_2312 -0.6 -1.0 Protein of unknown function DUF24 compare
Psyr_3807 -0.6 -3.0 hypothetical protein compare
Psyr_1686 -0.6 -1.5 Metallophosphoesterase compare
Psyr_1447 -0.6 -1.1 conserved hypothetical protein compare
Psyr_1021 -0.6 -2.8 Short-chain dehydrogenase/reductase SDR compare
Psyr_0920 -0.6 -5.2 Glycosyl transferase, group 1 compare
Psyr_2190 -0.6 -1.4 NADH:flavin oxidoreductase/NADH oxidase compare
Psyr_4920 -0.6 -0.9 conserved hypothetical bacteriophage protein compare
Psyr_2552 -0.6 -1.7 cyclase/dehydrase compare
Psyr_2694 -0.6 -1.7 conserved hypothetical protein compare
Psyr_2160 -0.6 -1.8 cold-shock DNA-binding protein family compare
Psyr_2617 -0.6 -1.4 Secretion protein HlyD compare
Psyr_2117 -0.6 -1.0 conserved hypothetical protein compare
Psyr_3729 -0.6 -2.4 hypothetical protein compare
Psyr_0535 -0.6 -1.6 toluene tolerance protein, putative compare
Psyr_3947 -0.6 -1.6 Methyltransferase, putative compare
Psyr_1069 -0.6 -2.3 molybdopterin synthase subunit MoaE compare
Psyr_2348 -0.6 -1.0 hypothetical protein compare
Psyr_1530 -0.6 -1.1 hypothetical protein compare
Psyr_0529 -0.6 -1.9 Glycosyl transferase, group 1 compare
Psyr_1017 -0.6 -1.0 type III effector HopJ1 compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Cantharidin across organisms