Experiment set11IT074 for Klebsiella michiganensis M5al

Compare to:

2'-Deoxycytidine 10 mM carbon source

200 most important genes:

  gene name fitness t score description  
BWI76_RS00850 -7.1 -8.5 acetylglutamate kinase compare
BWI76_RS18935 -7.0 -6.9 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS04250 -6.7 -6.5 homoserine kinase compare
BWI76_RS04160 -6.7 -6.3 phosphoserine phosphatase compare
BWI76_RS20350 -6.5 -6.8 amidophosphoribosyltransferase compare
BWI76_RS07070 -6.3 -4.3 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS04675 -6.3 -7.4 3-isopropylmalate dehydrogenase compare
BWI76_RS11850 -6.2 -9.5 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS20965 -6.1 -5.2 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS18920 -6.0 -4.1 ATP phosphoribosyltransferase compare
BWI76_RS18925 -5.8 -6.9 histidinol dehydrogenase compare
BWI76_RS23220 -5.8 -7.9 amino-acid N-acetyltransferase compare
BWI76_RS01615 -5.8 -7.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS00980 -5.7 -8.7 PLP-dependent threonine dehydratase compare
BWI76_RS01210 -5.7 -4.5 tyrosine recombinase XerC compare
BWI76_RS04245 -5.7 -11.5 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS04135 -5.7 -9.9 thymidine phosphorylase compare
BWI76_RS20895 -5.6 -5.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS04255 -5.6 -8.5 threonine synthase compare
BWI76_RS05840 -5.5 -5.4 glutamate 5-kinase compare
BWI76_RS04130 -5.5 -8.3 2-deoxyribose-5-phosphate aldolase compare
BWI76_RS01655 -5.5 -8.3 homoserine O-succinyltransferase compare
BWI76_RS04470 -5.4 -9.1 carbamoyl phosphate synthase large subunit compare
BWI76_RS02815 -5.4 -3.6 fructose-bisphosphatase class I compare
BWI76_RS00805 -5.3 -4.5 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS04670 -5.3 -9.5 3-isopropylmalate dehydratase large subunit compare
BWI76_RS04665 -5.3 -18.6 3-isopropylmalate dehydratase small subunit compare
BWI76_RS18940 -5.3 -5.1 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS04645 -5.2 -7.1 3-dehydroquinase compare
BWI76_RS00835 -5.2 -11.1 phosphoenolpyruvate carboxylase compare
BWI76_RS05835 -5.1 -3.5 gamma-glutamyl-phosphate reductase compare
BWI76_RS11840 -5.1 -2.6 tryptophan synthase subunit alpha compare
BWI76_RS04465 -5.1 -4.3 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04685 -5.1 -11.3 putative leucine operon leader peptide compare
BWI76_RS04680 -5.0 -13.3 2-isopropylmalate synthase compare
BWI76_RS21265 -4.9 -13.0 phosphoribosylformylglycinamidine synthase compare
BWI76_RS09755 -4.9 -7.8 phosphoserine transaminase compare
BWI76_RS09760 -4.9 -4.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS23360 -4.8 -3.3 diaminopimelate decarboxylase compare
BWI76_RS08385 -4.8 -4.6 citrate (Si)-synthase compare
BWI76_RS00855 -4.8 -7.6 argininosuccinate lyase compare
BWI76_RS09645 -4.8 -1.9 thioredoxin-disulfide reductase compare
BWI76_RS21465 -4.8 -4.5 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS24285 -4.8 -9.3 cystathionine beta-lyase compare
BWI76_RS01610 -4.7 -6.1 phosphoribosylamine--glycine ligase compare
BWI76_RS00975 -4.6 -8.4 dihydroxy-acid dehydratase compare
BWI76_RS00845 -4.4 -8.1 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS18930 -4.4 -5.7 histidinol-phosphate transaminase compare
BWI76_RS25115 -4.3 -5.9 argininosuccinate synthase compare
BWI76_RS22690 -4.2 -2.9 adenylyl-sulfate kinase compare
BWI76_RS18950 -4.2 -4.5 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS21475 -4.1 -4.7 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS23920 -4.1 -3.2 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS00990 -4.1 -8.3 ketol-acid reductoisomerase compare
BWI76_RS20355 -4.0 -3.7 colicin V production protein compare
BWI76_RS23365 -4.0 -8.1 LysR family transcriptional regulator compare
BWI76_RS04140 -4.0 -5.2 phosphopentomutase compare
BWI76_RS06185 -4.0 -8.8 shikimate kinase II compare
BWI76_RS11845 -3.9 -2.4 tryptophan synthase subunit beta compare
BWI76_RS09660 -3.7 -2.5 DNA translocase FtsK compare
BWI76_RS07065 -3.5 -7.9 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS19610 -3.5 -4.7 Cytidine deaminase (EC 3.5.4.5) (from data) compare
BWI76_RS11860 -3.4 -6.0 anthranilate synthase component I compare
BWI76_RS26085 -3.4 -2.8 3-dehydroquinate synthase compare
BWI76_RS00785 -3.2 -6.8 cystathionine gamma-synthase compare
BWI76_RS22765 -3.2 -10.3 sulfite reductase subunit alpha compare
BWI76_RS03010 -3.1 -6.9 ornithine carbamoyltransferase compare
BWI76_RS18955 -3.1 -7.3 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS03045 -3.1 -1.7 hypothetical protein compare
BWI76_RS22760 -3.0 -8.6 sulfite reductase subunit beta compare
BWI76_RS11855 -3.0 -6.1 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS00965 -2.9 -1.6 acetolactate synthase 2 small subunit compare
BWI76_RS24900 -2.9 -2.8 DeoR family transcriptional regulator compare
BWI76_RS02530 -2.9 -2.8 tRNA dimethylallyltransferase compare
BWI76_RS20130 -2.8 -7.1 NADH-quinone oxidoreductase subunit N compare
BWI76_RS04240 -2.7 -3.1 thr operon leader peptide compare
BWI76_RS04705 -2.6 -6.5 DNA-binding transcriptional regulator FruR compare
BWI76_RS04510 -2.5 -2.7 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS22755 -2.4 -6.0 phosphoadenosine phosphosulfate reductase compare
BWI76_RS03080 -2.4 -4.7 (Fe-S)-cluster assembly protein compare
BWI76_RS05120 -2.3 -7.1 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS09640 -2.3 -4.6 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS20145 -2.2 -2.2 NADH-quinone oxidoreductase subunit K compare
BWI76_RS00985 -2.2 -5.0 transcriptional regulator IlvY compare
BWI76_RS08395 -2.2 -2.2 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS23230 -2.2 -4.2 exodeoxyribonuclease V subunit beta compare
BWI76_RS20155 -2.1 -2.5 NADH-quinone oxidoreductase subunit I compare
BWI76_RS01350 -2.1 -1.4 NAD(P)H-flavin reductase compare
BWI76_RS25420 -2.1 -7.2 malate dehydrogenase compare
BWI76_RS08405 -2.1 -2.9 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS23480 -2.1 -10.0 EAL domain-containing protein compare
BWI76_RS01185 -2.0 -2.3 adenylate cyclase compare
BWI76_RS20170 -2.0 -5.3 NADH-quinone oxidoreductase subunit F compare
BWI76_RS05200 -2.0 -3.2 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS23915 -2.0 -2.6 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS01115 -2.0 -3.2 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS20230 -2.0 -1.6 hypothetical protein compare
BWI76_RS27475 -2.0 -9.1 regulatory protein GntR family protein compare
BWI76_RS22240 -1.9 -8.3 transcriptional regulator compare
BWI76_RS00140 -1.9 -1.2 phosphate transport system regulator PhoU compare
BWI76_RS20995 -1.9 -4.5 RNA degradosome polyphosphate kinase compare
BWI76_RS20650 -1.9 -1.8 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS03415 -1.9 -5.0 LacI family transcriptional regulator compare
BWI76_RS20270 -1.9 -2.9 hypothetical protein compare
BWI76_RS25960 -1.8 -3.6 NUDIX hydrolase compare
BWI76_RS24850 -1.8 -6.6 DeoR family transcriptional regulator compare
BWI76_RS20435 -1.8 -1.6 chorismate synthase compare
BWI76_RS21985 -1.8 -8.9 acetaldehyde dehydrogenase (EC 1.2.1.3) (from data) compare
BWI76_RS09335 -1.8 -1.5 baseplate assembly protein W compare
BWI76_RS25280 -1.8 -2.2 RNase adaptor protein RapZ compare
BWI76_RS20190 -1.8 -4.9 NADH-quinone oxidoreductase subunit A compare
BWI76_RS26570 -1.8 -3.2 anion permease compare
BWI76_RS05680 -1.8 -5.0 LacI family transcriptional regulator compare
BWI76_RS02610 -1.7 -5.8 transcriptional regulator compare
BWI76_RS15950 -1.7 -2.3 dethiobiotin synthase compare
BWI76_RS02735 -1.7 -3.8 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS14935 -1.7 -1.6 NIPSNAP family containing protein compare
BWI76_RS21990 -1.7 -8.4 ATPase AAA compare
BWI76_RS09635 -1.6 -2.7 amino acid ABC transporter ATP-binding protein compare
BWI76_RS01070 -1.6 -4.9 thiol reductase thioredoxin compare
BWI76_RS15825 -1.6 -1.9 hypothetical protein compare
BWI76_RS21310 -1.6 -1.2 DNA repair protein RecO compare
BWI76_RS21070 -1.6 -2.2 outer membrane protein assembly factor BamB compare
BWI76_RS02095 -1.6 -7.2 acetyl-coenzyme A synthetase compare
BWI76_RS20160 -1.6 -3.1 NADH-quinone oxidoreductase subunit H compare
BWI76_RS20140 -1.6 -5.3 NADH-quinone oxidoreductase subunit L compare
BWI76_RS19865 -1.6 -2.1 ecotin compare
BWI76_RS04715 -1.5 -1.7 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS20180 -1.5 -5.7 NADH-quinone oxidoreductase subunit C/D compare
BWI76_RS27075 -1.5 -4.0 IclR family transcriptional regulator compare
BWI76_RS09655 -1.5 -4.0 leucine-responsive regulatory protein compare
BWI76_RS20910 -1.5 -3.9 glycine cleavage system transcriptional repressor compare
BWI76_RS26620 -1.5 -1.1 Fe-S biogenesis protein NfuA compare
BWI76_RS20135 -1.5 -2.0 NADH-quinone oxidoreductase subunit M compare
BWI76_RS06730 -1.5 -2.7 lac repressor compare
BWI76_RS23830 -1.5 -5.3 hypothetical protein compare
BWI76_RS17195 -1.4 -2.5 hypothetical protein compare
BWI76_RS06680 -1.4 -1.2 hypothetical protein compare
BWI76_RS16235 -1.4 -2.4 membrane protein compare
BWI76_RS21345 -1.4 -2.4 sigma-E factor regulatory protein RseB compare
BWI76_RS07675 -1.4 -3.0 DeoR family transcriptional regulator compare
BWI76_RS13330 -1.4 -1.4 tellurite resistance methyltransferase TehB compare
BWI76_RS13545 -1.4 -1.2 N-acetyltransferase compare
BWI76_RS14835 -1.4 -1.1 hypothetical protein compare
BWI76_RS23240 -1.3 -2.4 exonuclease V subunit gamma compare
BWI76_RS01220 -1.3 -5.3 DNA-dependent helicase II compare
BWI76_RS15835 -1.3 -0.9 hypothetical protein compare
BWI76_RS21370 -1.3 -1.9 ATP-dependent RNA helicase SrmB compare
BWI76_RS21580 -1.3 -1.3 SsrA-binding protein compare
BWI76_RS08425 -1.2 -3.9 succinyl-CoA ligase subunit beta compare
BWI76_RS01385 -1.2 -2.1 potassium transporter compare
BWI76_RS05015 -1.2 -1.9 transcriptional regulator compare
BWI76_RS06530 -1.2 -2.7 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS15015 -1.2 -1.3 DUF2132 domain-containing protein compare
BWI76_RS26055 -1.2 -4.7 siroheme synthase compare
BWI76_RS20165 -1.2 -3.6 NADH-quinone oxidoreductase subunit G compare
BWI76_RS15225 -1.2 -4.0 DeoR family transcriptional regulator compare
BWI76_RS01200 -1.1 -1.9 diaminopimelate epimerase compare
BWI76_RS19730 -1.1 -3.0 1-phosphofructokinase compare
BWI76_RS26045 -1.1 -2.2 nitrite reductase small subunit compare
BWI76_RS10060 -1.1 -1.2 acylphosphatase compare
BWI76_RS11255 -1.1 -1.5 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS05005 -1.1 -2.0 polynucleotide adenylyltransferase compare
BWI76_RS06475 -1.1 -1.1 protoheme IX farnesyltransferase compare
BWI76_RS27815 -1.1 -6.8 acetolactate synthase catalytic subunit compare
BWI76_RS25480 -1.1 -2.1 ribonuclease E/G compare
BWI76_RS00400 -1.1 -0.6 glutamine synthetase compare
BWI76_RS06015 -1.1 -1.1 hypothetical protein compare
BWI76_RS01205 -1.1 -1.6 DUF484 family protein compare
BWI76_RS11430 -1.1 -0.8 lipoprotein compare
BWI76_RS07120 -1.1 -5.6 LacI family transcriptional regulator compare
BWI76_RS08430 -1.1 -2.7 succinate--CoA ligase subunit alpha compare
BWI76_RS00755 -1.1 -2.1 ATP-dependent protease subunit HslV compare
BWI76_RS15955 -1.0 -2.9 transcriptional regulator compare
BWI76_RS00440 -1.0 -1.5 CopG family transcriptional regulator compare
BWI76_RS02985 -1.0 -2.6 reactive intermediate/imine deaminase compare
BWI76_RS20150 -1.0 -1.4 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS27170 -1.0 -3.9 MltR family transcriptional regulator compare
BWI76_RS15290 -1.0 -1.3 transcriptional regulator compare
BWI76_RS06525 -1.0 -2.2 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS12420 -1.0 -0.9 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS16275 -1.0 -1.9 fumarate hydratase FumA compare
BWI76_RS21810 -1.0 -1.8 universal stress protein compare
BWI76_RS20970 -1.0 -1.0 phosphoribosylglycinamide formyltransferase compare
BWI76_RS06800 -1.0 -0.9 DUF2496 domain-containing protein compare
BWI76_RS24955 -1.0 -1.1 hypothetical protein compare
BWI76_RS11980 -1.0 -1.0 DeoR family transcriptional regulator compare
BWI76_RS08230 -1.0 -2.1 hypothetical protein compare
BWI76_RS14970 -1.0 -1.5 pyrroline-5-carboxylate reductase compare
BWI76_RS12345 -0.9 -2.7 nitrite transporter compare
BWI76_RS19715 -0.9 -6.6 pseudouridine-5'-phosphate glycosidase compare
BWI76_RS18715 -0.9 -4.3 hypothetical protein compare
BWI76_RS21130 -0.9 -1.6 Fe-S assembly protein IscX compare
BWI76_RS08720 -0.9 -1.3 imidazolonepropionase compare
BWI76_RS13595 -0.9 -3.4 transcriptional regulator compare
BWI76_RS09050 -0.9 -2.7 MFS transporter compare
BWI76_RS15830 -0.9 -1.6 hypothetical protein compare
BWI76_RS08700 -0.9 -3.9 helix-turn-helix-type transcriptional regulator compare
BWI76_RS21570 -0.9 -2.0 RnfH family protein compare
BWI76_RS27430 -0.9 -0.8 (p)ppGpp synthetase compare


Specific Phenotypes

For 23 genes in this experiment

For carbon source 2'-Deoxycytidine in Klebsiella michiganensis M5al

For carbon source 2'-Deoxycytidine across organisms