Experiment set11IT073 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Huperzine A 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_1544 -3.9 -3.8 SirA-like protein compare
Psyr_4340 -3.7 -8.3 phosphomethylpyrimidine kinase, putative compare
Psyr_0951 -3.7 -4.3 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_3008 -3.4 -7.4 Undecaprenyl-diphosphatase compare
Psyr_4203 -3.3 -2.3 SsrA-binding protein compare
Psyr_4740 -3.1 -5.9 thiazole-phosphate synthase compare
Psyr_1613 -3.0 -5.0 septum site-determining protein MinC compare
Psyr_4683 -3.0 -4.5 dethiobiotin synthase compare
Psyr_1663 -3.0 -2.9 phosphoribosylanthranilate isomerase compare
Psyr_4991 -2.8 -3.3 hypothetical protein compare
Psyr_0475 -2.7 -1.9 Protein of unknown function YGGT compare
Psyr_1556 -2.7 -3.3 hypothetical protein compare
Psyr_4581 -2.7 -3.3 anthranilate synthase, component II compare
Psyr_4686 -2.6 -6.0 8-amino-7-oxononanoate synthase compare
Psyr_4341 -2.6 -7.9 thiamine-phosphate diphosphorylase compare
Psyr_4580 -2.6 -3.0 anthranilate phosphoribosyltransferase compare
Psyr_0849 -2.4 -9.3 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_4687 -2.4 -6.8 biotin synthase compare
Psyr_0454 -2.0 -5.1 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_4684 -1.9 -3.3 biotin synthesis protein BioC compare
Psyr_0917 -1.8 -9.2 ABC-2 compare
Psyr_0918 -1.8 -10.2 ABC transporter compare
Psyr_0574 -1.6 -4.8 protease FtsH subunit HflK compare
Psyr_3262 -1.6 -2.2 dnaK suppressor protein, putative compare
Psyr_2347 -1.6 -1.6 hypothetical protein compare
Psyr_4627 -1.6 -2.5 dimethyladenosine transferase compare
Psyr_3808 -1.5 -2.0 hypothetical protein compare
Psyr_1378 -1.4 -2.4 RecA protein compare
Psyr_1907 -1.4 -2.6 GTP cyclohydrolase I compare
Psyr_2769 -1.4 -4.1 conserved hypothetical protein compare
Psyr_5135 -1.4 -2.0 Protein of unknown function DUF37 compare
Psyr_0826 -1.4 -5.8 glucose-6-phosphate isomerase compare
Psyr_2227 -1.4 -2.2 conserved hypothetical protein compare
Psyr_3581 -1.3 -4.5 ribosomal large subunit pseudouridine synthase B compare
Psyr_4091 -1.3 -3.0 8-oxo-dGTPase compare
Psyr_2346 -1.3 -4.6 conserved hypothetical protein compare
Psyr_1419 -1.3 -2.5 preQ(0) biosynthesis protein QueC compare
Psyr_3199 -1.3 -2.7 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_4884 -1.2 -4.5 Rhodanese-like protein compare
Psyr_1748 -1.2 -4.3 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_3954 -1.2 -3.8 GTP-binding protein LepA compare
Psyr_2990 -1.2 -2.5 conserved hypothetical protein compare
Psyr_1935 -1.2 -4.0 Protein of unknown function DUF796 compare
Psyr_4460 -1.2 -2.2 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_1373 -1.2 -2.4 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_0565 -1.2 -4.2 Protein of unknown function UPF0126 compare
Psyr_0487 -1.2 -2.2 glutathione synthase compare
Psyr_1946 -1.2 -1.8 diaminobutyrate aminotransferase apoenzyme compare
Psyr_1250 -1.2 -3.4 conserved hypothetical protein compare
Psyr_2824 -1.2 -3.5 conserved hypothetical protein compare
Psyr_1718 -1.2 -2.6 von Willebrand factor, type A compare
Psyr_4822 -1.1 -2.3 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_0535 -1.1 -2.8 toluene tolerance protein, putative compare
Psyr_4089 -1.1 -4.0 PAS compare
Psyr_3952 -1.1 -2.5 conserved hypothetical protein compare
Psyr_3290 -1.1 -2.9 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_1408 -1.1 -1.9 Holliday junction endonuclease RuvC compare
Psyr_1751 -1.1 -3.2 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_0550 -1.1 -2.5 Protein of unknown function UPF0227 compare
Psyr_2855 -1.1 -3.4 methionine synthase (B12-independent) compare
Psyr_1410 -1.1 -3.0 Holliday junction DNA helicase RuvB compare
Psyr_0034 -1.1 -0.7 tryptophan synthase, beta chain compare
Psyr_3193 -1.1 -2.0 Transcription factor jumonji, jmjC compare
Psyr_1930 -1.1 -2.5 hypothetical protein compare
Psyr_0281 -1.0 -2.4 ABC transporter compare
Psyr_2275 -1.0 -2.7 glutamate synthase (NADPH) GltB3 subunit compare
Psyr_1227 -1.0 -2.4 Queuosine biosynthesis protein compare
Psyr_4055 -1.0 -2.6 conserved domain protein compare
Psyr_1667 -1.0 -4.0 Colicin V production protein compare
Psyr_1832 -1.0 -1.9 Exonuclease compare
Psyr_3152 -1.0 -1.4 hypothetical protein compare
Psyr_1094 -1.0 -2.2 cold-shock DNA-binding protein family compare
Psyr_3104 -1.0 -2.0 phosphate ABC transporter membrane protein 2, PhoT family compare
Psyr_4361 -1.0 -2.2 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 compare
Psyr_2641 -1.0 -1.7 hypothetical protein compare
Psyr_3555 -1.0 -1.6 aspartate kinase compare
Psyr_4115 -1.0 -1.6 phosphoheptose isomerase compare
Psyr_2160 -0.9 -1.8 cold-shock DNA-binding protein family compare
Psyr_2980 -0.9 -2.4 UDP-glucose pyrophosphorylase compare
Psyr_4278 -0.9 -2.1 regulatory protein, LuxR compare
Psyr_0724 -0.9 -1.6 conserved hypothetical protein compare
Psyr_2985 -0.9 -2.6 DNA-N1-methyladenine dioxygenase compare
Psyr_0579 -0.9 -6.3 RNAse R compare
Psyr_0575 -0.9 -2.3 protease FtsH subunit HflC compare
Psyr_1460 -0.9 -2.8 hypothetical protein compare
Psyr_0282 -0.9 -2.7 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1811 -0.9 -1.5 transcriptional regulator, GntR family compare
Psyr_4362 -0.9 -2.4 Rare lipoprotein A compare
Psyr_0170 -0.9 -2.6 heat shock protein Hsp15 compare
Psyr_0259 -0.9 -2.4 Osmolarity sensor protein envZ compare
Psyr_0215 -0.9 -5.3 Exodeoxyribonuclease III xth compare
Psyr_1540 -0.9 -1.8 hypothetical protein compare
Psyr_4386 -0.9 -2.7 conserved hypothetical protein compare
Psyr_2765 -0.8 -1.8 conserved domain protein compare
Psyr_2664 -0.8 -3.7 hypothetical protein compare
Psyr_3806 -0.8 -3.3 hypothetical protein compare
Psyr_1212 -0.8 -1.5 type III secretion protein HrpO compare
Psyr_0255 -0.8 -1.6 glutamate-cysteine ligase compare
Psyr_0184 -0.8 -2.5 Protein of unknown function DUF484 compare
Psyr_2422 -0.8 -2.4 transcriptional regulator, LysR family compare
Psyr_0528 -0.8 -1.7 Carbamoyltransferase compare
Psyr_2982 -0.8 -1.9 conserved hypothetical protein compare
Psyr_2462 -0.8 -2.5 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_3613 -0.8 -4.0 Glutathione peroxidase compare
Psyr_2854 -0.8 -2.7 conserved hypothetical protein compare
Psyr_2392 -0.8 -3.1 conserved hypothetical protein compare
Psyr_2620 -0.8 -1.5 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_1934 -0.8 -3.8 conserved hypothetical protein compare
Psyr_2899 -0.8 -2.4 conserved hypothetical protein compare
Psyr_4254 -0.8 -1.6 conserved hypothetical protein compare
Psyr_1975 -0.8 -2.3 Integrase, catalytic region compare
Psyr_4019 -0.8 -1.8 H-NS family protein MvaT compare
Psyr_0919 -0.8 -5.2 Chromosome segregation ATPase-like protein compare
Psyr_3240 -0.8 -2.1 CTP synthase compare
Psyr_4057 -0.8 -2.6 regulatory protein, LysR:LysR, substrate-binding protein compare
Psyr_4051 -0.8 -1.9 transcriptional regulator, ArsR family compare
Psyr_0493 -0.8 -1.4 CheW-like protein compare
Psyr_3854 -0.8 -1.1 OmpA/MotB compare
Psyr_1198 -0.8 -1.5 type III secretion protein HrpF compare
Psyr_2628 -0.8 -2.3 ABC transporter compare
Psyr_4490 -0.7 -1.3 transcriptional regulator, DeoR family compare
Psyr_0524 -0.7 -2.1 Lipopolysaccharide kinase compare
Psyr_4562 -0.7 -3.4 conserved domain protein compare
Psyr_1509 -0.7 -3.3 PilM protein, putative compare
Psyr_1783 -0.7 -1.9 CDS compare
Psyr_0680 -0.7 -2.5 DNA helicase/exodeoxyribonuclease V, gamma subunit compare
Psyr_3208 -0.7 -1.2 NADH dehydrogenase subunit M compare
Psyr_4416 -0.7 -2.4 precorrin-8X methylmutase compare
Psyr_3281 -0.7 -1.8 Glycoside hydrolase, family 3, N-terminal compare
Psyr_4519 -0.7 -4.3 General substrate transporter:Major facilitator superfamily compare
Psyr_2420 -0.7 -1.6 conserved hypothetical protein compare
Psyr_3282 -0.7 -3.0 transcriptional regulator, TetR family compare
Psyr_3751 -0.7 -2.0 Carbon storage regulator compare
Psyr_1968 -0.7 -1.8 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_2738 -0.7 -2.6 regulatory protein, LysR compare
Psyr_1645 -0.7 -2.1 phosphate:acyl-[acyl carrier protein] acyltransferase compare
Psyr_2405 -0.7 -3.2 transcriptional regulator, GntR family compare
Psyr_2520 -0.7 -1.1 SOS-response transcriptional repressor, LexA compare
Psyr_0394 -0.7 -2.8 Heat shock protein HslU compare
Psyr_0638 -0.7 -2.1 Peptidase S16, lon N-terminal compare
Psyr_2345 -0.7 -3.0 ea59 protein compare
Psyr_2838 -0.7 -1.4 conserved hypothetical protein compare
Psyr_2880 -0.7 -3.2 conserved hypothetical protein compare
Psyr_2203 -0.7 -2.3 amino acid/amide ABC transporter membrane protein 2, HAAT family compare
Psyr_0916 -0.7 -4.7 GDP-mannose 4,6-dehydratase compare
Psyr_2356 -0.7 -2.5 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer compare
Psyr_4622 -0.7 -2.2 Nucleotidyl transferase compare
Psyr_1972 -0.7 -2.2 conserved hypothetical protein compare
Psyr_2977 -0.7 -2.3 cointegrate resolution protein T compare
Psyr_5130 -0.7 -3.5 chromosome segregation ATPase compare
Psyr_2180 -0.6 -1.6 transcriptional regulator, LysR family compare
Psyr_3644 -0.6 -1.6 prephenate dehydrogenase compare
Psyr_4512 -0.6 -2.8 putative phage-related protein compare
Psyr_1017 -0.6 -0.8 type III effector HopJ1 compare
Psyr_1596 -0.6 -1.6 Helix-turn-helix motif protein compare
Psyr_3084 -0.6 -2.1 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_4112 -0.6 -4.1 Protein of unknown function UPF0011 compare
Psyr_5132 -0.6 -1.1 Glucose-inhibited division protein A subfamily compare
Psyr_2135 -0.6 -1.6 molybdenum cofactor guanylyltransferase compare
Psyr_2251 -0.6 -0.8 Phosphonate metabolism PhnG compare
Psyr_3620 -0.6 -0.9 hypothetical protein compare
Psyr_1458 -0.6 -1.2 hypothetical protein compare
Psyr_1404 -0.6 -3.4 Ferritin and Dps compare
Psyr_2797 -0.6 -2.6 hypothetical protein compare
Psyr_1791 -0.6 -1.7 HAD-superfamily hydrolase, subfamily IA, variant 2 compare
Psyr_5067 -0.6 -2.8 conserved hypothetical protein compare
Psyr_0250 -0.6 -2.2 conserved hypothetical protein compare
Psyr_0383 -0.6 -0.6 Twin-arginine translocation protein TatB compare
Psyr_4995 -0.6 -1.8 RHS protein compare
Psyr_0491 -0.6 -2.0 chemotaxis sensory transducer compare
Psyr_3616 -0.6 -3.4 Heat shock protein, Metallo peptidase, MEROPS family M48B compare
Psyr_5133 -0.6 -1.9 tRNA modification GTPase trmE compare
Psyr_0940 -0.6 -3.0 CDS compare
Psyr_4860 -0.6 -0.9 Integrase, catalytic region compare
Psyr_1864 -0.6 -1.7 spermidine synthase compare
Psyr_0569 -0.6 -2.8 N-acetylmuramoyl-L-alanine amidase compare
Psyr_1747 -0.6 -2.0 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_0941 -0.6 -3.1 Conserved hypothetical protein 92 compare
Psyr_2809 -0.6 -1.5 hypothetical protein compare
Psyr_0983 -0.6 -3.1 Protein of unknown function DUF159 compare
Psyr_2840 -0.6 -1.5 hypothetical protein compare
Psyr_2535 -0.6 -2.3 GGDEF domain protein compare
Psyr_1989 -0.6 -2.3 galactonate dehydratase compare
Psyr_2320 -0.6 -2.8 YD repeat protein compare
Psyr_3552 -0.6 -1.4 Divalent cation transporter compare
Psyr_1692 -0.6 -2.2 conserved hypothetical protein compare
Psyr_2126 -0.6 -2.0 4-carboxymuconolactone decarboxylase compare
Psyr_1121 -0.6 -1.2 6-phosphogluconolactonase compare
Psyr_2770 -0.6 -3.1 tail fiber domain protein compare
Psyr_4893 -0.6 -1.3 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_3840 -0.6 -1.8 conserved hypothetical protein compare
Psyr_3164 -0.6 -3.3 Protein of unknown function UPF0005 compare
Psyr_3696 -0.6 -2.2 23S rRNA m(5)U-1939 methyltransferase compare
Psyr_3701 -0.6 -1.1 thioredoxin, putative compare
Psyr_2947 -0.6 -1.7 hypothetical protein compare
Psyr_0580 -0.6 -2.0 23S rRNA Gm-2251 2'-O-methyltransferase compare
Psyr_3833 -0.6 -1.8 Plasmid stabilization system compare
Psyr_3720 -0.6 -2.7 Filamentation induced by cAMP protein Fic compare
Psyr_1269 -0.6 -1.5 phosphoribosylformylglycinamidine synthase compare
Psyr_2601 -0.6 -3.1 regulatory protein, LuxR compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Huperzine A across organisms