Experiment set11IT069 for Klebsiella michiganensis M5al

Compare to:

2-Deoxy-D-ribonic acid lithium salt 10 mM carbon source

200 most important genes:

  gene name fitness t score description  
BWI76_RS00805 -7.3 -4.8 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS24285 -7.2 -5.0 cystathionine beta-lyase compare
BWI76_RS09760 -7.2 -4.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS04685 -7.1 -4.9 putative leucine operon leader peptide compare
BWI76_RS00850 -6.7 -10.6 acetylglutamate kinase compare
BWI76_RS04250 -6.6 -6.4 homoserine kinase compare
BWI76_RS01655 -6.5 -7.6 homoserine O-succinyltransferase compare
BWI76_RS04160 -6.5 -6.3 phosphoserine phosphatase compare
BWI76_RS11855 -6.4 -6.2 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS04645 -6.4 -4.4 3-dehydroquinase compare
BWI76_RS07070 -6.3 -4.4 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS00845 -6.3 -6.1 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS23920 -6.2 -4.2 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS18930 -6.1 -5.3 histidinol-phosphate transaminase compare
BWI76_RS18950 -6.1 -5.4 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS18920 -6.0 -3.9 ATP phosphoribosyltransferase compare
BWI76_RS25115 -6.0 -7.1 argininosuccinate synthase compare
BWI76_RS20350 -5.9 -7.8 amidophosphoribosyltransferase compare
BWI76_RS04470 -5.9 -9.0 carbamoyl phosphate synthase large subunit compare
BWI76_RS04670 -5.8 -8.8 3-isopropylmalate dehydratase large subunit compare
BWI76_RS21070 -5.7 -3.3 outer membrane protein assembly factor BamB compare
BWI76_RS00990 -5.7 -6.8 ketol-acid reductoisomerase compare
BWI76_RS08385 -5.7 -3.1 citrate (Si)-synthase compare
BWI76_RS01210 -5.6 -4.0 tyrosine recombinase XerC compare
BWI76_RS00855 -5.6 -7.7 argininosuccinate lyase compare
BWI76_RS21475 -5.5 -6.1 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS04245 -5.4 -12.0 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS02815 -5.4 -3.2 fructose-bisphosphatase class I compare
BWI76_RS18955 -5.3 -5.0 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS09640 -5.3 -3.6 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS27385 -5.3 -6.2 orotate phosphoribosyltransferase compare
BWI76_RS00980 -5.1 -9.8 PLP-dependent threonine dehydratase compare
BWI76_RS05835 -5.1 -3.4 gamma-glutamyl-phosphate reductase compare
BWI76_RS18940 -5.0 -4.0 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS21465 -4.9 -3.9 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS02995 -4.9 -6.1 aspartate carbamoyltransferase compare
BWI76_RS04665 -4.9 -18.1 3-isopropylmalate dehydratase small subunit compare
BWI76_RS18935 -4.9 -4.9 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS20965 -4.8 -3.6 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS04255 -4.8 -7.5 threonine synthase compare
BWI76_RS09910 -4.8 -16.4 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS09645 -4.8 -1.7 thioredoxin-disulfide reductase compare
BWI76_RS20355 -4.8 -3.6 colicin V production protein compare
BWI76_RS11850 -4.8 -6.5 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS11840 -4.8 -3.4 tryptophan synthase subunit alpha compare
BWI76_RS26085 -4.8 -2.8 3-dehydroquinate synthase compare
BWI76_RS09755 -4.8 -5.4 phosphoserine transaminase compare
BWI76_RS04675 -4.8 -5.0 3-isopropylmalate dehydrogenase compare
BWI76_RS23365 -4.6 -6.4 LysR family transcriptional regulator compare
BWI76_RS18925 -4.6 -3.0 histidinol dehydrogenase compare
BWI76_RS11860 -4.6 -8.7 anthranilate synthase component I compare
BWI76_RS11965 -4.5 -4.7 orotidine-5'-phosphate decarboxylase compare
BWI76_RS23700 -4.5 -8.5 glycerate CoA-transferase (from data) compare
BWI76_RS11845 -4.3 -1.7 tryptophan synthase subunit beta compare
BWI76_RS23730 -4.3 -7.1 glycerate kinase compare
BWI76_RS10990 -4.2 -2.1 dihydroorotase compare
BWI76_RS23220 -4.2 -5.6 amino-acid N-acetyltransferase compare
BWI76_RS00965 -4.2 -1.4 acetolactate synthase 2 small subunit compare
BWI76_RS03010 -4.1 -6.3 ornithine carbamoyltransferase compare
BWI76_RS01350 -4.0 -1.4 NAD(P)H-flavin reductase compare
BWI76_RS21310 -4.0 -1.4 DNA repair protein RecO compare
BWI76_RS09635 -4.0 -2.5 amino acid ABC transporter ATP-binding protein compare
BWI76_RS23735 -3.9 -4.5 sugar diacid utilization regulator compare
BWI76_RS00785 -3.9 -6.7 cystathionine gamma-synthase compare
BWI76_RS21265 -3.9 -11.4 phosphoribosylformylglycinamidine synthase compare
BWI76_RS04530 -3.9 -2.7 peptidylprolyl isomerase SurA compare
BWI76_RS23705 -3.9 -3.7 2-deoxy-D-ribonyl-CoA 3-dehydrogenase (from data) compare
BWI76_RS00985 -3.9 -5.2 transcriptional regulator IlvY compare
BWI76_RS05840 -3.9 -4.5 glutamate 5-kinase compare
BWI76_RS04240 -3.8 -1.6 thr operon leader peptide compare
BWI76_RS00975 -3.8 -6.5 dihydroxy-acid dehydratase compare
BWI76_RS00835 -3.8 -10.9 phosphoenolpyruvate carboxylase compare
BWI76_RS23710 -3.8 -5.6 3-keto-2-deoxy-D-ribonyl-CoA thiolase (from data) compare
BWI76_RS04465 -3.8 -5.7 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04680 -3.8 -8.8 2-isopropylmalate synthase compare
BWI76_RS23360 -3.8 -4.2 diaminopimelate decarboxylase compare
BWI76_RS01610 -3.7 -6.5 phosphoribosylamine--glycine ligase compare
BWI76_RS09660 -3.7 -2.5 DNA translocase FtsK compare
BWI76_RS23695 -3.6 -6.6 deoxyribonyl-CoA synthetase (from data) compare
BWI76_RS22765 -3.6 -9.5 sulfite reductase subunit alpha compare
BWI76_RS09615 -3.5 -2.3 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS20895 -3.5 -6.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS20640 -3.4 -4.3 cysteine synthase A compare
BWI76_RS01615 -3.4 -7.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS22755 -3.3 -5.5 phosphoadenosine phosphosulfate reductase compare
BWI76_RS08425 -3.2 -5.3 succinyl-CoA ligase subunit beta compare
BWI76_RS07065 -3.2 -6.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS22760 -3.2 -7.5 sulfite reductase subunit beta compare
BWI76_RS20435 -3.1 -1.5 chorismate synthase compare
BWI76_RS22690 -3.1 -3.7 adenylyl-sulfate kinase compare
BWI76_RS05200 -3.0 -2.9 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS09970 -3.0 -4.9 porin OmpA compare
BWI76_RS18770 -2.9 -1.3 DNA gyrase inhibitor compare
BWI76_RS11125 -2.8 -1.6 metal-dependent hydrolase compare
BWI76_RS21140 -2.8 -3.5 molecular chaperone HscA compare
BWI76_RS06525 -2.7 -2.6 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS26175 -2.6 -3.7 DeoR/GlpR family transcriptional regulator compare
BWI76_RS01200 -2.6 -2.6 diaminopimelate epimerase compare
BWI76_RS23715 -2.6 -6.0 2-deoxy-D-ribonate transporter 1 (from data) conserved
BWI76_RS20380 -2.5 -1.4 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS11435 -2.4 -1.7 hypothetical protein compare
BWI76_RS01185 -2.4 -1.6 adenylate cyclase compare
BWI76_RS26055 -2.4 -4.6 siroheme synthase compare
BWI76_RS05015 -2.4 -2.0 transcriptional regulator compare
BWI76_RS08720 -2.3 -2.3 imidazolonepropionase compare
BWI76_RS11520 -2.2 -1.5 hypothetical protein compare
BWI76_RS02580 -2.2 -1.6 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS23240 -2.2 -4.0 exonuclease V subunit gamma compare
BWI76_RS26890 -2.2 -1.4 hypothetical protein compare
BWI76_RS21580 -2.2 -1.6 SsrA-binding protein compare
BWI76_RS25645 -2.2 -5.3 shikimate dehydrogenase compare
BWI76_RS20650 -2.2 -1.5 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS01630 -2.0 -1.2 16S ribosomal RNA compare
BWI76_RS15435 -2.0 -1.6 hypothetical protein compare
BWI76_RS08430 -2.0 -3.2 succinate--CoA ligase subunit alpha compare
BWI76_RS20440 -2.0 -1.5 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS23230 -2.0 -4.1 exodeoxyribonuclease V subunit beta compare
BWI76_RS02735 -2.0 -3.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS06530 -2.0 -4.6 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS14075 -1.9 -1.6 TetR family transcriptional regulator compare
BWI76_RS01385 -1.9 -2.0 potassium transporter compare
BWI76_RS14870 -1.9 -2.0 hypothetical protein compare
BWI76_RS26620 -1.9 -1.1 Fe-S biogenesis protein NfuA compare
BWI76_RS04305 -1.9 -1.2 molecular chaperone DnaJ compare
BWI76_RS19330 -1.9 -1.4 HAD family hydrolase compare
BWI76_RS19010 -1.9 -2.3 polysaccharide pyruvyl transferase yvff compare
BWI76_RS11430 -1.8 -1.0 lipoprotein compare
BWI76_RS00140 -1.8 -1.0 phosphate transport system regulator PhoU compare
BWI76_RS08650 -1.8 -2.2 molybdate ABC transporter permease compare
BWI76_RS02410 -1.8 -1.2 EF-P beta-lysylation protein EpmB compare
BWI76_RS00755 -1.8 -2.3 ATP-dependent protease subunit HslV compare
BWI76_RS23480 -1.8 -8.6 EAL domain-containing protein compare
BWI76_RS11235 -1.8 -1.3 hypothetical protein compare
BWI76_RS21345 -1.8 -2.6 sigma-E factor regulatory protein RseB compare
BWI76_RS04705 -1.7 -3.5 DNA-binding transcriptional regulator FruR compare
BWI76_RS27390 -1.7 -1.9 ribonuclease PH compare
BWI76_RS17195 -1.7 -2.4 hypothetical protein compare
BWI76_RS08405 -1.7 -2.6 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS00960 -1.7 -4.6 acetolactate synthase 2 catalytic subunit compare
BWI76_RS03080 -1.6 -3.9 (Fe-S)-cluster assembly protein compare
BWI76_RS24080 -1.6 -1.8 DUF179 domain-containing protein compare
BWI76_RS02725 -1.6 -1.0 HxlR family transcriptional regulator compare
BWI76_RS26570 -1.6 -2.0 anion permease compare
BWI76_RS13560 -1.5 -1.1 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS24850 -1.5 -5.0 DeoR family transcriptional regulator compare
BWI76_RS02530 -1.5 -2.2 tRNA dimethylallyltransferase compare
BWI76_RS08535 -1.5 -1.5 translocation protein TolB compare
BWI76_RS17110 -1.5 -1.4 vitamin B12 ABC transporter permease BtuC compare
BWI76_RS18675 -1.5 -2.0 fimbrial protein compare
BWI76_RS12420 -1.5 -1.1 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS17190 -1.5 -2.0 TonB system transport protein TonB compare
BWI76_RS23895 -1.5 -1.3 Xaa-Pro aminopeptidase compare
BWI76_RS19900 -1.5 -2.6 FAD:protein FMN transferase compare
BWI76_RS20375 -1.5 -1.9 membrane protein compare
BWI76_RS22085 -1.4 -3.0 L-valine transporter subunit YgaH compare
BWI76_RS19730 -1.4 -3.7 1-phosphofructokinase compare
BWI76_RS24900 -1.4 -1.7 DeoR family transcriptional regulator compare
BWI76_RS25320 -1.4 -4.8 glutamate synthase compare
BWI76_RS15835 -1.3 -0.8 hypothetical protein compare
BWI76_RS15825 -1.3 -0.9 hypothetical protein compare
BWI76_RS25935 -1.3 -1.9 glutathione-regulated potassium-efflux system ancillary protein KefG compare
BWI76_RS24385 -1.3 -4.3 phosphodiesterase compare
BWI76_RS07675 -1.3 -3.8 DeoR family transcriptional regulator compare
BWI76_RS11440 -1.3 -1.2 hypothetical protein compare
BWI76_RS23720 -1.3 -1.9 calcium-binding protein compare
BWI76_RS05070 -1.3 -1.5 type II secretion system protein GspH compare
BWI76_RS06185 -1.2 -4.4 shikimate kinase II compare
BWI76_RS17400 -1.2 -1.2 transporter compare
BWI76_RS09610 -1.2 -2.5 ATP-dependent Clp protease adaptor ClpS compare
BWI76_RS18605 -1.2 -0.9 oxidoreductase molybdopterin-binding protein compare
BWI76_RS15685 -1.2 -2.1 hypothetical protein compare
BWI76_RS08330 -1.2 -1.3 hypothetical protein compare
BWI76_RS24635 -1.2 -2.5 autoinducer-2 (AI-2) modifying protein LsrG compare
BWI76_RS05520 -1.2 -2.9 hypothetical protein compare
BWI76_RS13250 -1.2 -1.1 cytochrome b561 compare
BWI76_RS06535 -1.2 -2.3 endopeptidase La compare
BWI76_RS07185 -1.2 -1.3 hypothetical protein compare
BWI76_RS13595 -1.2 -3.1 transcriptional regulator compare
BWI76_RS12860 -1.2 -2.0 hypothetical protein compare
BWI76_RS09470 -1.2 -2.1 putrescine ABC transporter permease compare
BWI76_RS09030 -1.2 -3.7 transpeptidase compare
BWI76_RS27455 -1.2 -1.8 DUF805 domain-containing protein compare
BWI76_RS17370 -1.2 -1.8 nitrate transporter NasD compare
BWI76_RS23725 -1.2 -2.2 2-deoxy-D-ribonate transporter 2 (from data) compare
BWI76_RS02610 -1.2 -2.5 transcriptional regulator compare
BWI76_RS00710 -1.2 -1.6 6-N-hydroxylaminopurine resistance protein compare
BWI76_RS06800 -1.2 -0.9 DUF2496 domain-containing protein compare
BWI76_RS27940 -1.2 -1.3 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
BWI76_RS24100 -1.1 -1.4 YggS family pyridoxal phosphate enzyme compare
BWI76_RS15850 -1.1 -1.5 DUF1317 domain-containing protein compare
BWI76_RS00400 -1.1 -0.6 glutamine synthetase compare
BWI76_RS15830 -1.1 -2.2 hypothetical protein compare
BWI76_RS21480 -1.1 -2.5 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS08580 -1.1 -2.6 quinolinate synthetase compare
BWI76_RS25915 -1.1 -1.8 protein SlyX compare
BWI76_RS07805 -1.1 -2.1 sugar ABC transporter permease compare
BWI76_RS20760 -1.1 -2.2 ethanolamine ammonia-lyase small subunit compare
BWI76_RS10835 -1.1 -1.4 hypothetical protein compare
BWI76_RS20145 -1.1 -1.3 NADH-quinone oxidoreductase subunit K compare
BWI76_RS09530 -1.1 -0.9 hypothetical protein compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source 2-Deoxy-D-ribonic acid lithium salt in Klebsiella michiganensis M5al

For carbon source 2-Deoxy-D-ribonic acid lithium salt across organisms