Experiment set11IT069 for Klebsiella michiganensis M5al

Compare to:

2-Deoxy-D-ribonic acid lithium salt 10 mM carbon source

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS17975 +2.0 8.2 tail-specific protease compare
BWI76_RS17980 +1.9 5.5 RNA chaperone ProQ compare
BWI76_RS20695 +1.8 4.5 sulfate/thiosulfate transporter permease subunit compare
BWI76_RS01540 +1.7 3.2 thiamine biosynthesis protein ThiS compare
BWI76_RS25225 +1.7 3.0 ABC transporter permease compare
BWI76_RS09440 +1.6 3.8 hypothetical protein compare
BWI76_RS06540 +1.6 2.7 DNA-binding protein HU-beta compare
BWI76_RS25065 +1.5 3.8 polyribonucleotide nucleotidyltransferase compare
BWI76_RS16900 +1.5 2.4 4-hydroxy-2-oxovalerate aldolase compare
BWI76_RS25060 +1.4 4.3 lipoprotein NlpI compare
BWI76_RS16260 +1.4 2.5 two-component sensor histidine kinase compare
BWI76_RS07640 +1.3 2.4 short chain dehydrogenase compare
BWI76_RS25070 +1.3 2.1 hypothetical protein compare
BWI76_RS08765 +1.3 2.7 8-amino-7-oxononanoate synthase compare
BWI76_RS14835 +1.3 1.7 hypothetical protein compare
BWI76_RS24260 +1.2 2.7 hypothetical protein compare
BWI76_RS16090 +1.2 2.8 two-component system response regulator DcuR compare
BWI76_RS02745 +1.2 1.7 hypothetical protein compare
BWI76_RS01935 +1.2 2.4 thiamin phosphate synthase compare
BWI76_RS13955 +1.2 2.7 hypothetical protein compare
BWI76_RS22090 +1.2 2.4 transcriptional regulator compare
BWI76_RS16000 +1.1 1.6 multidrug transporter subunit MdtI compare
BWI76_RS20690 +1.1 4.7 sulfate ABC transporter ATP-binding protein compare
BWI76_RS11110 +1.1 1.8 cell division protein YceG compare
BWI76_RS11515 +1.1 1.3 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS21090 +1.1 2.2 cytoskeletal protein RodZ compare
BWI76_RS23020 +1.1 1.5 cobalamin biosynthesis protein CbiQ compare
BWI76_RS06110 +1.1 3.7 hypothetical protein compare
BWI76_RS26395 +1.1 2.3 cell division protein FtsE compare
BWI76_RS09240 +1.1 3.5 phosphoadenosine phosphosulfate reductase compare
BWI76_RS15940 +1.1 1.8 DMSO reductase maturation protein DsmD compare
BWI76_RS09625 +1.1 1.7 hypothetical protein compare
BWI76_RS07595 +1.1 2.3 putative oxidoreductase compare
BWI76_RS21375 +1.1 1.1 autonomous glycyl radical cofactor GrcA compare
BWI76_RS17720 +1.1 1.6 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS19375 +1.1 2.0 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS23125 +1.0 2.2 propanediol dehydratase small subunit compare
BWI76_RS13160 +1.0 2.1 azoreductase compare
BWI76_RS15620 +1.0 1.9 hypothetical protein compare
BWI76_RS15990 +1.0 2.3 serine protease compare
BWI76_RS26470 +1.0 3.5 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS21235 +1.0 1.2 hypothetical protein compare
BWI76_RS18550 +1.0 1.5 tRNA-Asn compare
BWI76_RS19870 +1.0 2.4 malate:quinone oxidoreductase compare
BWI76_RS19840 +1.0 1.1 hypothetical protein compare
BWI76_RS07780 +1.0 1.2 hypothetical protein compare
BWI76_RS03610 +1.0 1.5 hypothetical protein compare
BWI76_RS03800 +1.0 2.8 hypothetical protein compare
BWI76_RS16205 +0.9 4.8 NAD(P) transhydrogenase subunit alpha compare
BWI76_RS19470 +0.9 1.8 DNA-binding response regulator compare
BWI76_RS00590 +0.9 2.2 hypothetical protein compare
BWI76_RS03045 +0.9 1.2 hypothetical protein compare
BWI76_RS09255 +0.9 1.5 hypothetical protein compare
BWI76_RS14460 +0.9 1.7 MurR/RpiR family transcriptional regulator compare
BWI76_RS20705 +0.9 2.6 thiosulfate transporter subunit compare
BWI76_RS06910 +0.9 1.2 transcriptional regulator compare
BWI76_RS09520 +0.9 1.6 arginine ABC transporter ATP-binding protein ArtP compare
BWI76_RS18745 +0.9 2.3 adenosylhomocysteinase compare
BWI76_RS18915 +0.9 1.6 NAD(P)-dependent oxidoreductase compare
BWI76_RS09500 +0.9 3.4 arginine ABC transporter substrate-binding protein compare
BWI76_RS07760 +0.9 2.0 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase compare
BWI76_RS05970 +0.9 2.5 hypothetical protein compare
BWI76_RS10380 +0.9 2.7 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS27605 +0.9 1.2 hypothetical protein compare
BWI76_RS10950 +0.8 2.0 MFS transporter compare
BWI76_RS22420 +0.8 1.9 LacI family transcriptional regulator compare
BWI76_RS07725 +0.8 0.9 iron-enterobactin transporter permease compare
BWI76_RS22935 +0.8 1.4 L-fucose mutarotase compare
BWI76_RS22185 +0.8 2.3 hypothetical protein compare
BWI76_RS24105 +0.8 2.4 resistance protein compare
BWI76_RS27915 +0.8 1.6 YceK/YidQ family lipoprotein compare
BWI76_RS25000 +0.8 1.0 malonate decarboxylase acyl carrier protein compare
BWI76_RS23255 +0.8 1.3 prepilin-type cleavage/methylation domain-containing protein compare
BWI76_RS01585 +0.8 2.7 transcriptional regulator compare
BWI76_RS26440 +0.8 1.0 hypothetical protein compare
BWI76_RS17660 +0.8 1.5 AraC/XylS familytranscription regulator compare
BWI76_RS12985 +0.8 1.2 transcriptional regulator compare
BWI76_RS00885 +0.8 2.3 tRNA (uridine(54)-C5)-methyltransferase TrmA compare
BWI76_RS13155 +0.8 2.2 hypothetical protein compare
BWI76_RS24065 +0.8 1.4 deoxyribonuclease I compare
BWI76_RS20390 +0.8 2.0 erythronate-4-phosphate dehydrogenase compare
BWI76_RS12045 +0.8 1.5 hypothetical protein compare
BWI76_RS08375 +0.8 1.5 pyroglutamyl-peptidase I compare
BWI76_RS22815 +0.8 4.1 hybrid sensor histidine kinase/response regulator compare
BWI76_RS03190 +0.8 1.7 hypothetical protein compare
BWI76_RS22215 +0.8 2.0 PTS sorbitol transporter subunit IIC compare
BWI76_RS10755 +0.8 0.8 pyrimidine utilization flavin reductase protein F compare
BWI76_RS14755 +0.8 1.2 SIS domain-containing protein compare
BWI76_RS05645 +0.8 1.9 fructuronate reductase compare
BWI76_RS03700 +0.8 3.8 hypothetical protein compare
BWI76_RS09860 +0.8 1.9 hypothetical protein compare
BWI76_RS01900 +0.8 2.1 tRNA-dihydrouridine synthase A compare
BWI76_RS12495 +0.8 1.2 2-Cys peroxiredoxin compare
BWI76_RS26460 +0.7 2.4 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS11500 +0.7 4.4 D-hexose-6-phosphate mutarotase compare
BWI76_RS26280 +0.7 1.6 hypothetical protein compare
BWI76_RS17615 +0.7 2.1 RNA pseudouridine synthase compare
BWI76_RS14670 +0.7 1.6 hypothetical protein compare
BWI76_RS19115 +0.7 2.7 outer membrane assembly protein AsmA compare
BWI76_RS15260 +0.7 1.1 hypothetical protein compare
BWI76_RS17155 +0.7 1.5 hypothetical protein compare
BWI76_RS12485 +0.7 1.7 TyrR family transcriptional regulator compare
BWI76_RS04165 +0.7 1.5 DNA repair protein RadA compare
BWI76_RS11010 +0.7 2.6 30S ribosomal protein S5 alanine N-acetyltransferase compare
BWI76_RS00865 +0.7 3.1 DNA-binding transcriptional regulator OxyR compare
BWI76_RS26390 +0.7 1.8 cell division protein FtsX compare
BWI76_RS04770 +0.7 3.1 D-alanine--D-alanine ligase compare
BWI76_RS24830 +0.7 2.6 5-keto-4-deoxy-D-glucarate aldolase compare
BWI76_RS19215 +0.7 1.1 proline-specific peptidase compare
BWI76_RS27395 +0.7 1.7 hypothetical protein compare
BWI76_RS12535 +0.7 2.3 hypothetical protein compare
BWI76_RS13040 +0.7 2.8 transcriptional regulator compare
BWI76_RS11950 +0.7 1.7 phosphatidylglycerophosphatase B compare
BWI76_RS05185 +0.7 3.6 CdaR family transcriptional regulator compare
BWI76_RS24940 +0.7 2.4 hypothetical protein compare
BWI76_RS23875 +0.7 2.7 glycine cleavage system protein H compare
BWI76_RS23400 +0.7 2.4 oligogalacturonide lyase compare
BWI76_RS20360 +0.7 0.7 cell division protein DedD compare
BWI76_RS12825 +0.7 1.5 hypothetical protein compare
BWI76_RS12755 +0.7 2.7 hypothetical protein compare
BWI76_RS13545 +0.7 0.9 N-acetyltransferase compare
BWI76_RS20700 +0.7 3.1 sulfate/thiosulfate transporter subunit compare
BWI76_RS25220 +0.7 1.3 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS02695 +0.7 2.2 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS06735 +0.7 1.2 50S ribosomal protein L31 compare
BWI76_RS22040 +0.7 2.5 carboxymuconolactone decarboxylase family protein compare
BWI76_RS12575 +0.7 1.2 FAD-dependent oxidoreductase compare
BWI76_RS17315 +0.7 1.5 EamA family transporter compare
BWI76_RS12470 +0.7 1.1 thiosulfate sulfurtransferase PspE compare
BWI76_RS16485 +0.7 0.9 ribonuclease T compare
BWI76_RS22475 +0.7 1.2 heme ABC transporter ATP-binding protein compare
BWI76_RS08620 +0.7 1.9 galactose-1-phosphate uridylyltransferase compare
BWI76_RS11060 +0.7 1.3 septum formation inhibitor Maf compare
BWI76_RS15900 +0.7 1.5 hypothetical protein compare
BWI76_RS16990 +0.7 2.1 ABC transporter ATP-binding protein compare
BWI76_RS14615 +0.7 0.8 hypothetical protein compare
BWI76_RS19480 +0.7 1.5 transcriptional regulator compare
BWI76_RS18455 +0.7 1.0 tRNA-Ser compare
BWI76_RS18575 +0.7 1.0 transcriptional regulator compare
BWI76_RS13630 +0.7 1.4 ABC transporter compare
BWI76_RS16805 +0.7 1.0 basic amino acid ABC transporter substrate-binding protein compare
BWI76_RS23120 +0.7 1.0 propanediol dehydratase medium subunit compare
BWI76_RS20785 +0.7 0.8 ethanolamine utilization protein EutJ compare
BWI76_RS15285 +0.7 1.8 stress protection protein MarC compare
BWI76_RS21485 +0.7 3.6 DUF4154 domain-containing protein compare
BWI76_RS12465 +0.7 0.7 phage shock protein D compare
BWI76_RS13945 +0.6 1.2 lysine exporter protein LysE/YggA compare
BWI76_RS20150 +0.6 1.0 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS04115 +0.6 2.4 patatin family protein compare
BWI76_RS07925 +0.6 2.3 hypothetical protein compare
BWI76_RS18800 +0.6 1.9 transcriptional regulator compare
BWI76_RS08755 +0.6 2.8 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
BWI76_RS20310 +0.6 1.9 hypothetical protein compare
BWI76_RS23495 +0.6 3.8 hypothetical protein compare
BWI76_RS04715 +0.6 1.3 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS06050 +0.6 2.3 MFS transporter family glucose-6-phosphate receptor UhpC compare
BWI76_RS14050 +0.6 0.6 AP endonuclease, family 2 compare
BWI76_RS16535 +0.6 2.8 MATE family efflux transporter compare
BWI76_RS09310 +0.6 2.0 hypothetical protein compare
BWI76_RS02180 +0.6 0.5 hypothetical protein compare
BWI76_RS14895 +0.6 2.7 3-oxoacyl-ACP reductase compare
BWI76_RS16675 +0.6 0.7 ABC transporter compare
BWI76_RS05465 +0.6 0.7 amidohydrolase compare
BWI76_RS26015 +0.6 1.3 DUF2559 domain-containing protein compare
BWI76_RS14415 +0.6 1.2 transcriptional regulator, TetR family protein compare
BWI76_RS15775 +0.6 1.4 replication protein compare
BWI76_RS13135 +0.6 2.1 3-oxoadipyl-CoA thiolase compare
BWI76_RS23015 +0.6 0.9 cobalt transporter ATP-binding subunit compare
BWI76_RS08880 +0.6 2.5 secretion protein HlyD compare
BWI76_RS14510 +0.6 2.5 MFS transporter compare
BWI76_RS02625 +0.6 1.8 PTS ascorbate transporter subunit IIB compare
BWI76_RS07325 +0.6 1.6 aminoimidazole riboside kinase compare
BWI76_RS09190 +0.6 1.6 hypothetical protein compare
BWI76_RS17225 +0.6 2.4 oligopeptide ABC transporter ATP-binding protein OppD compare
BWI76_RS05315 +0.6 1.0 Rho-binding antiterminator compare
BWI76_RS02220 +0.6 1.1 carbon-phosphorus lyase subunit PhnH compare
BWI76_RS00745 +0.6 2.0 1,4-dihydroxy-2-naphthoate polyprenyltransferase compare
BWI76_RS14750 +0.6 2.4 transcriptional regulator compare
BWI76_RS08275 +0.6 0.9 LexA regulated protein compare
BWI76_RS21940 +0.6 2.0 SDR family oxidoreductase compare
BWI76_RS10245 +0.6 1.6 aspartate aminotransferase compare
BWI76_RS02690 +0.6 1.3 hypothetical protein compare
BWI76_RS19535 +0.6 2.1 putative integral membrane protein compare
BWI76_RS00075 +0.6 1.3 N-acetylmannosamine-6-phosphate 2-epimerase compare
BWI76_RS06290 +0.6 1.0 ACP phosphodiesterase compare
BWI76_RS24745 +0.6 1.1 membrane protein compare
BWI76_RS25445 +0.6 2.3 p-hydroxybenzoic acid efflux pump subunit AaeB compare
BWI76_RS22715 +0.6 1.7 type I-E CRISPR-associated endoribonuclease Cas2 compare
BWI76_RS26835 +0.6 2.0 hypothetical protein compare
BWI76_RS07265 +0.6 1.4 ABC transporter ATP-binding protein compare
BWI76_RS09830 +0.6 1.2 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM compare
BWI76_RS19885 +0.6 1.8 multidrug ABC transporter permease/ATP-binding protein compare
BWI76_RS10365 +0.6 1.6 class IV aminotransferase compare
BWI76_RS27235 +0.6 3.7 murein hydrolase activator EnvC compare
BWI76_RS10650 +0.6 1.4 PTS fructose-like transporter subunit EIIB compare
BWI76_RS09035 +0.6 2.1 protein tyrosine/serine phosphatase compare
BWI76_RS15670 +0.6 1.7 hypothetical protein compare
BWI76_RS18755 +0.6 0.8 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS21120 +0.6 2.3 enhanced serine sensitivity protein SseB compare
BWI76_RS13445 +0.6 1.4 alpha/beta hydrolase compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source 2-Deoxy-D-ribonic acid lithium salt in Klebsiella michiganensis M5al

For carbon source 2-Deoxy-D-ribonic acid lithium salt across organisms