Experiment set11IT066 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

palatinose hydrate carbon source

200 most detrimental genes:

  gene name fitness t score description  
BT3642 +2.4 14.8 Na+-dependent transporter (NCBI ptt file) compare
BT1211 +1.4 3.2 hypothetical protein (NCBI ptt file) compare
BT4028 +1.2 1.8 hypothetical protein (NCBI ptt file) compare
BT0723 +1.0 1.7 hypothetical protein (NCBI ptt file) compare
BT0067 +1.0 1.8 hypothetical protein (NCBI ptt file) compare
BT1117 +1.0 1.3 conserved hypothetical protein, with a cAMP-binding domain (NCBI ptt file) compare
BT0429 +1.0 2.0 indolepyruvate oxidoreductase subunit iorB (NCBI ptt file) compare
BT4453 +1.0 1.3 6-pyruvoyl-tetrahydropterin synthase (NCBI ptt file) compare
BT1484 +1.0 2.5 conserved hypothetical protein with a conserved domain (NCBI ptt file) compare
BT0722 +1.0 3.3 conserved hypothetical protein, putative surface protein, function unknown (NCBI ptt file) compare
BT0878 +1.0 1.6 ABC transporter, ATP-binding protein (NCBI ptt file) compare
BT0173 +1.0 2.6 conserved hypothetical protein (NCBI ptt file) compare
BT1256 +1.0 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT0013 +1.0 3.1 hypothetical protein (NCBI ptt file) compare
BT4424 +0.9 3.3 sorbitol dehydrogenase (NCBI ptt file) compare
BT4046 +0.9 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT1849 +0.9 1.9 hypothetical protein (NCBI ptt file) compare
BT0977 +0.9 1.7 hypothetical protein (NCBI ptt file) compare
BT0417 +0.9 2.2 hypothetical protein (NCBI ptt file) compare
BT4698 +0.9 1.7 conserved hypothetical protein (NCBI ptt file) compare
BT1933 +0.9 2.0 transposase (NCBI ptt file) compare
BT2042 +0.9 1.7 tRNA and rRNA cytosine-C5-methylase (NCBI ptt file) compare
BT1741 +0.9 1.7 hypothetical protein (NCBI ptt file) compare
BT4452 +0.9 1.4 conserved hypothetical protein (NCBI ptt file) compare
BT1431 +0.9 2.8 putative DNA polymerase III epsilon chain (NCBI ptt file) compare
BT3457 +0.9 2.3 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0704 +0.8 1.6 phosphoribosylglycinamide formyltransferase 2 (NCBI ptt file) compare
BT1958 +0.8 2.1 hypothetical protein (NCBI ptt file) compare
BT1400 +0.8 3.4 conserved hypothetical protein (NCBI ptt file) compare
BT1693 +0.8 2.2 periplasmic linker protein, putative multidrug resistance protein (NCBI ptt file) compare
BT1214 +0.8 2.3 putative ABC transporter ATP-binding protein (NCBI ptt file) compare
BT4678 +0.8 4.6 L-serine dehydratase (NCBI ptt file) compare
BT1466 +0.8 2.1 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT1031 +0.8 2.2 conserved hypothetical protein (NCBI ptt file) compare
BT1056 +0.8 2.8 conserved hypothetical protein (NCBI ptt file) compare
BT1423 +0.8 2.7 conserved hypothetical protein (NCBI ptt file) compare
BT3920 +0.8 1.3 conserved hypothetical protein (NCBI ptt file) compare
BT0193 +0.8 1.8 conserved hypothetical protein (NCBI ptt file) compare
BT4747 +0.8 2.2 hypothetical protein (NCBI ptt file) compare
BT0843 +0.8 2.5 hypothetical protein (NCBI ptt file) compare
BT2148 +0.8 2.2 glycosyltransferase (NCBI ptt file) compare
BT3077 +0.7 1.2 ribonuclease R (NCBI ptt file) compare
BT0510 +0.7 3.1 putative heme biosynthesis protein (NCBI ptt file) compare
BT0319 +0.7 1.9 hypothetical protein (NCBI ptt file) compare
BT0540 +0.7 2.6 putative exopolyphosphatase (NCBI ptt file) compare
BT3628 +0.7 1.8 conserved hypothetical protein (NCBI ptt file) compare
BT4466 +0.7 1.3 hypothetical protein (NCBI ptt file) compare
BT1392 +0.7 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT0194 +0.7 3.0 hypothetical protein (NCBI ptt file) compare
BT4421 +0.7 1.1 conserved hypothetical protein (NCBI ptt file) compare
BT4531 +0.7 3.1 conserved hypothetical protein (NCBI ptt file) compare
BT0238 +0.7 1.7 transcriptional regulator (NCBI ptt file) compare
BT2945 +0.7 4.0 UDP-N-acetyl-D-mannosamine dehydrogenase (NCBI ptt file) compare
BT0803 +0.7 2.3 integral membrane efflux pump, putative multidrug-efflux transporter (NCBI ptt file) compare
BT0860 +0.7 1.1 putative ABC transporter ATP-binding protein (NCBI ptt file) compare
BT3397 +0.7 2.1 hypothetical protein (NCBI ptt file) compare
BT0799 +0.7 1.2 hypothetical protein (NCBI ptt file) compare
BT1193 +0.7 2.9 conserved hypothetical protein (NCBI ptt file) compare
BT1310 +0.7 3.3 conserved hypothetical protein (NCBI ptt file) compare
BT3839 +0.7 1.0 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT2929 +0.7 1.1 putative non-specific DNA-binding protein (NCBI ptt file) compare
BT1398 +0.7 3.8 putative aminotransferase B (NCBI ptt file) compare
BT0479 +0.7 1.4 putative glycosyltransferase (NCBI ptt file) compare
BT0339 +0.7 2.4 alpha-glucosidase (NCBI ptt file) compare
BT1656 +0.7 1.2 putative transcriptional regulator (NCBI ptt file) compare
BT1478 +0.6 2.9 putative histidinol-phosphatase (NCBI ptt file) compare
BT3772 +0.6 1.6 ribosomal large subunit pseudouridine synthase D (NCBI ptt file) compare
BT0885 +0.6 1.4 putative cation efflux pump (NCBI ptt file) compare
BT2139 +0.6 4.0 conserved hypothetical protein (NCBI ptt file) compare
BT0095 +0.6 2.3 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT3326 +0.6 2.0 putative nifR3 family TIM-barrel enzyme with dihydrouridine synthase domain (NCBI ptt file) compare
BT1176 +0.6 2.0 putative glycosyltransferase (NCBI ptt file) compare
BT3751 +0.6 2.6 outer membrane protein (NCBI ptt file) compare
BT2314 +0.6 1.3 hypothetical protein (NCBI ptt file) compare
BT0253 +0.6 2.7 hypothetical protein (NCBI ptt file) compare
BT2194 +0.6 2.8 sialidase precursor, exo-alpha-sialidase (NCBI ptt file) compare
BT1227 +0.6 2.7 conserved hypothetical protein (NCBI ptt file) compare
BT3441 +0.6 2.1 hypothetical protein (NCBI ptt file) compare
BT0601 +0.6 2.4 UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT3232 +0.6 1.1 gluconate 5-dehydrogenase (NCBI ptt file) compare
BT2520 +0.6 2.3 conserved hypothetical protein (NCBI ptt file) compare
BT4423 +0.6 2.1 xylulose kinase (NCBI ptt file) compare
BT1633 +0.6 2.1 mannose-1-phosphate guanyltransferase (NCBI ptt file) compare
BT1805 +0.6 1.5 electron transfer flavoprotein alpha-subunit (NCBI ptt file) compare
BT1189 +0.6 1.5 conserved hypothetical protein (NCBI ptt file) compare
BT0928 +0.6 1.8 two-component system response regulator (NCBI ptt file) compare
BT1929 +0.6 2.4 transposase (NCBI ptt file) compare
BT0281 +0.6 2.3 putative DNA-binding protein (NCBI ptt file) compare
BT0768 +0.6 2.7 putative para-aminobenzoate synthase component I (NCBI ptt file) compare
BT4305 +0.6 4.1 putative alpha-amylase (NCBI ptt file) compare
BT4198 +0.6 1.7 conserved hypothetical protein (NCBI ptt file) compare
BT4429 +0.6 2.8 putative pteridine-dependent dioxygenase (NCBI ptt file) compare
BT4738 +0.6 3.8 formate acetyltransferase (NCBI ptt file) compare
BT3904 +0.6 2.6 conserved hypothetical protein (NCBI ptt file) compare
BT0514 +0.6 2.3 conserved hypothetical protein (NCBI ptt file) compare
BT4768 +0.6 2.0 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT4428 +0.6 0.9 hypothetical protein (NCBI ptt file) compare
BT0542 +0.6 1.3 conserved hypothetical protein (NCBI ptt file) compare
BT2979 +0.6 2.6 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
BT3650 +0.6 2.8 conserved hypothetical protein (NCBI ptt file) compare
BT1477 +0.6 2.8 conserved hypothetical protein (NCBI ptt file) compare
BT0372 +0.6 1.6 aldose 1-epimerase precursor (NCBI ptt file) compare
BT1667 +0.6 0.9 hypothetical protein (NCBI ptt file) compare
BT4161 +0.6 1.2 hypothetical protein (NCBI ptt file) compare
BT1920 +0.6 2.8 hypothetical protein (NCBI ptt file) compare
BT1928 +0.6 2.2 transposase (NCBI ptt file) compare
BT2936 +0.6 2.7 putative glycosyltransferase (NCBI ptt file) compare
BT3315 +0.6 2.5 hypothetical protein (NCBI ptt file) compare
BT0764 +0.6 2.6 hypothetical protein (NCBI ptt file) compare
BT2944 +0.6 2.5 putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT4587 +0.6 1.4 conserved hypothetical protein (NCBI ptt file) compare
BT0630 +0.6 2.4 exodeoxyribonuclease (NCBI ptt file) compare
BT2083 +0.6 1.0 hypothetical protein (NCBI ptt file) compare
BT4234 +0.6 1.9 hypothetical protein (NCBI ptt file) compare
BT0535 +0.6 2.6 iron-containing alcohol dehydrogenase (NCBI ptt file) compare
BT1899 +0.6 2.6 conserved hypothetical protein (NCBI ptt file) compare
BT1257 +0.6 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT0900 +0.6 1.7 putative tetratricopeptide repeat family protein (NCBI ptt file) compare
BT0757 +0.5 3.1 beta-galactosidase (NCBI ptt file) compare
BT1868 +0.5 0.8 conserved hypothetical protein (NCBI ptt file) compare
BT1641 +0.5 1.0 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT3798 +0.5 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT0023 +0.5 2.0 transposase (NCBI ptt file) compare
BT1144 +0.5 2.9 conserved hypothetical protein (NCBI ptt file) compare
BT1146 +0.5 1.5 putative metallo-beta-lactamase (NCBI ptt file) compare
BT0149 +0.5 1.8 peptidase (NCBI ptt file) compare
BT1803 +0.5 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT3903 +0.5 2.4 conserved hypothetical protein (NCBI ptt file) compare
BT2115 +0.5 1.5 hypothetical protein (NCBI ptt file) compare
BT0271 +0.5 2.3 hypothetical protein (NCBI ptt file) compare
BT0941 +0.5 1.7 hypothetical protein (NCBI ptt file) compare
BT3802 +0.5 2.0 peptidyl-prolyl cis-trans isomerase, cyclophilin-type (NCBI ptt file) compare
BT3330 +0.5 2.6 hypothetical protein (NCBI ptt file) compare
BT3806 +0.5 0.6 conserved hypothetical protein (NCBI ptt file) compare
BT4326 +0.5 1.4 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT3572 +0.5 2.9 hypothetical protein (NCBI ptt file) compare
BT1199 +0.5 2.3 putative protease (NCBI ptt file) compare
BT0762 +0.5 1.6 hypothetical protein (NCBI ptt file) compare
BT1819 +0.5 2.4 hypothetical protein (NCBI ptt file) compare
BT2046 +0.5 0.6 putative cardiolipin synthetase (NCBI ptt file) compare
BT1463 +0.5 1.7 putative acetyltransferase (NCBI ptt file) compare
BT0673 +0.5 1.7 NADP(H) oxidoreductase (NCBI ptt file) compare
BT1306 +0.5 1.7 putative ABC transporter ATP-binding protein (NCBI ptt file) compare
BT2581 +0.5 2.8 hypothetical protein (NCBI ptt file) compare
BT3356 +0.5 2.9 6-phosphofructokinase (NCBI ptt file) compare
BT1217 +0.5 1.6 two-component system response regulator (NCBI ptt file) compare
BT4202 +0.5 2.5 hypothetical protein (NCBI ptt file) compare
BT0642 +0.5 2.0 RNA pseudouridylate synthase (NCBI ptt file) compare
BT1314 +0.5 2.3 dipeptidyl-peptidase VI (NCBI ptt file) compare
BT4703 +0.5 2.0 chloromuconate cycloisomerase (NCBI ptt file) compare
BT0978 +0.5 2.1 ECF-type sigma factor (NCBI ptt file) compare
BT1394 +0.5 1.2 conserved hypothetical protein (NCBI ptt file) compare
BT4315 +0.5 3.2 HPr(Ser) phosphatase (NCBI ptt file) compare
BT1988 +0.5 1.1 hypothetical protein (NCBI ptt file) compare
BT2494 +0.5 3.1 ABC transporter, ATP-binding protein (NCBI ptt file) compare
BT0404 +0.5 2.1 hypothetical protein (NCBI ptt file) compare
BT0991 +0.5 1.4 conserved hypothetical protein (NCBI ptt file) compare
BT1274 +0.5 1.9 L-fuculose-1-phosphate aldolase FucA (4.1.2.17); D-ribulose-1-phosphate aldolase (from data) compare
BT3860 +0.5 1.7 conserved hypothetical protein (NCBI ptt file) compare
BT1701 +0.5 1.1 hypothetical protein (NCBI ptt file) compare
BT4147 +0.5 1.6 hypothetical protein (NCBI ptt file) compare
BT1515 +0.5 0.7 conserved hypothetical protein (NCBI ptt file) compare
BT0507 +0.5 1.9 transcriptional regulator (TetR/AcrR family) (NCBI ptt file) compare
BT1201 +0.5 0.7 conserved hypothetical protein (NCBI ptt file) compare
BT4468 +0.5 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT2938 +0.5 1.2 putative glycosyltransferase (NCBI ptt file) compare
BT1230 +0.5 1.2 hypothetical protein (NCBI ptt file) compare
BT0984 +0.5 2.4 hypothetical protein (NCBI ptt file) compare
BT1427 +0.5 1.7 tetracycline resistance element mobilization regulatory protein rteC (NCBI ptt file) compare
BT1750 +0.5 2.8 glycine betaine/L-proline transport system permease (NCBI ptt file) compare
BT4490 +0.5 1.7 hypothetical protein (NCBI ptt file) compare
BT1577 +0.5 1.6 pyridoxamine 5'-phosphate oxidase (NCBI ptt file) compare
BT1198 +0.5 1.4 LemA protein (NCBI ptt file) compare
BT0139 +0.5 1.3 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT4009 +0.5 2.6 integrase (NCBI ptt file) compare
BT0125 +0.5 1.9 NADH:ubiquinone oxidoreductase subunit (NCBI ptt file) compare
BT0400 +0.5 1.1 putative tyrosine-protein kinase in capsular polysaccharide biosynthesis region (NCBI ptt file) compare
BT0681 +0.5 1.3 two-component system sensor histidine kinase (NCBI ptt file) compare
BT0241 +0.5 1.0 hypothetical protein (NCBI ptt file) compare
BT1113 +0.5 1.9 flavodoxin (NCBI ptt file) compare
BT0814 +0.5 1.1 conserved hypothetical protein, putative outer membrane protein (NCBI ptt file) compare
BT1034 +0.5 1.8 putative signal transducer (NCBI ptt file) compare
BT2960 +0.5 1.7 hypothetical protein (NCBI ptt file) compare
BT0009 +0.5 2.1 phosphate-binding periplasmic protein precursor, putative ABC transporter (NCBI ptt file) compare
BT0773 +0.5 2.3 alpha-amylase 3 (NCBI ptt file) compare
BT0692 +0.5 1.1 putative calcineurin superfamily phosphohydrolase (NCBI ptt file) compare
BT0641 +0.5 1.4 hypothetical protein (NCBI ptt file) compare
BT0879 +0.5 1.6 ABC transporter, permease protein (NCBI ptt file) compare
BT0783 +0.5 0.7 hypothetical protein (NCBI ptt file) compare
BT0552 +0.5 1.7 glutamate synthase, small subunit (NCBI ptt file) compare
BT4346 +0.5 1.4 conserved hypothetical protein, with a Metallo-beta-lactamase superfamily domain (NCBI ptt file) compare
BT3925 +0.5 1.7 nucleoside diphosphate kinase (NCBI ptt file) compare
BT0965 +0.5 1.4 putative anti-sigma factor (NCBI ptt file) compare
BT2028 +0.5 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT1426 +0.5 1.4 conserved hypothetical protein (NCBI ptt file) compare
BT3398 +0.5 2.3 conserved hypothetical protein (NCBI ptt file) compare
BT4574 +0.5 1.3 conserved hypothetical protein (NCBI ptt file) compare
BT0563 +0.4 1.4 putative ABC transporter ATP-binding protein or permease protein (NCBI ptt file) compare
BT3641 +0.4 2.3 conserved hypothetical protein (NCBI ptt file) compare
BT4513 +0.4 1.7 putative rRNA methylase (NCBI ptt file) compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source palatinose hydrate in Bacteroides thetaiotaomicron VPI-5482

For carbon source palatinose hydrate across organisms