Experiment set11IT065 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Mexicanolide 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_4740 -4.0 -5.5 thiazole-phosphate synthase compare
Psyr_3008 -3.5 -8.7 Undecaprenyl-diphosphatase compare
Psyr_4340 -3.4 -9.4 phosphomethylpyrimidine kinase, putative compare
Psyr_1544 -3.2 -4.8 SirA-like protein compare
Psyr_4991 -3.1 -3.7 hypothetical protein compare
Psyr_1613 -3.1 -4.6 septum site-determining protein MinC compare
Psyr_0951 -2.7 -4.4 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4683 -2.7 -5.0 dethiobiotin synthase compare
Psyr_4686 -2.5 -6.5 8-amino-7-oxononanoate synthase compare
Psyr_0849 -2.5 -10.0 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_0475 -2.4 -2.8 Protein of unknown function YGGT compare
Psyr_4341 -2.4 -6.4 thiamine-phosphate diphosphorylase compare
Psyr_0454 -2.2 -5.4 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_0918 -2.2 -11.5 ABC transporter compare
Psyr_4091 -2.1 -4.7 8-oxo-dGTPase compare
Psyr_4203 -2.1 -2.8 SsrA-binding protein compare
Psyr_4687 -2.1 -7.2 biotin synthase compare
Psyr_5132 -2.1 -4.1 Glucose-inhibited division protein A subfamily compare
Psyr_0917 -2.1 -9.8 ABC-2 compare
Psyr_3287 -2.0 -2.6 DNA topoisomerase I compare
Psyr_3193 -1.9 -2.7 Transcription factor jumonji, jmjC compare
Psyr_0255 -1.9 -2.9 glutamate-cysteine ligase compare
Psyr_4684 -1.8 -3.3 biotin synthesis protein BioC compare
Psyr_3954 -1.8 -6.2 GTP-binding protein LepA compare
Psyr_1663 -1.8 -3.2 phosphoribosylanthranilate isomerase compare
Psyr_0383 -1.8 -2.5 Twin-arginine translocation protein TatB compare
Psyr_2980 -1.7 -3.5 UDP-glucose pyrophosphorylase compare
Psyr_2347 -1.7 -2.0 hypothetical protein compare
Psyr_4581 -1.7 -3.2 anthranilate synthase, component II compare
Psyr_4627 -1.6 -2.8 dimethyladenosine transferase compare
Psyr_2847 -1.5 -2.1 hypothetical protein compare
Psyr_0574 -1.5 -4.9 protease FtsH subunit HflK compare
Psyr_4580 -1.5 -2.5 anthranilate phosphoribosyltransferase compare
Psyr_0044 -1.4 -2.2 transferase hexapeptide repeat protein compare
Psyr_1556 -1.4 -2.6 hypothetical protein compare
Psyr_1408 -1.4 -3.3 Holliday junction endonuclease RuvC compare
Psyr_0826 -1.4 -6.1 glucose-6-phosphate isomerase compare
Psyr_4136 -1.3 -2.6 BolA-like protein compare
Psyr_2664 -1.3 -6.0 hypothetical protein compare
Psyr_3947 -1.3 -2.4 Methyltransferase, putative compare
Psyr_1667 -1.3 -4.8 Colicin V production protein compare
Psyr_3806 -1.3 -4.3 hypothetical protein compare
Psyr_1748 -1.3 -4.2 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_0575 -1.2 -3.1 protease FtsH subunit HflC compare
Psyr_2641 -1.2 -2.2 hypothetical protein compare
Psyr_4884 -1.2 -3.9 Rhodanese-like protein compare
Psyr_2462 -1.2 -4.1 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_0565 -1.2 -5.5 Protein of unknown function UPF0126 compare
Psyr_0487 -1.2 -2.3 glutathione synthase compare
Psyr_3179 -1.2 -2.2 DNA translocase FtsK compare
Psyr_1930 -1.2 -3.2 hypothetical protein compare
Psyr_3581 -1.2 -4.9 ribosomal large subunit pseudouridine synthase B compare
Psyr_1250 -1.2 -3.2 conserved hypothetical protein compare
Psyr_4822 -1.1 -3.2 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_3419 -1.1 -3.7 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_0927 -1.1 -3.2 hypothetical protein compare
Psyr_2823 -1.1 -1.3 hypothetical protein compare
Psyr_4566 -1.1 -6.7 Peptidase M23B compare
Psyr_1751 -1.1 -3.4 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_3120 -1.1 -2.0 D-glucarate dehydratase compare
Psyr_4089 -1.1 -4.3 PAS compare
Psyr_1907 -1.1 -2.1 GTP cyclohydrolase I compare
Psyr_0282 -1.1 -3.8 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0215 -1.1 -7.3 Exodeoxyribonuclease III xth compare
Psyr_2848 -1.1 -3.5 hypothetical protein compare
Psyr_4634 -1.1 -1.6 Polynucleotide adenylyltransferase:Metal-dependent phosphohydrolase, HD subdomain protein compare
Psyr_3554 -1.0 -1.7 Carbon storage regulator compare
Psyr_2899 -1.0 -3.3 conserved hypothetical protein compare
Psyr_0493 -1.0 -2.4 CheW-like protein compare
Psyr_2346 -1.0 -3.8 conserved hypothetical protein compare
Psyr_1688 -1.0 -2.3 Protein of unknown function DUF1315 compare
Psyr_2143 -1.0 -1.8 delta1-piperideine 2-carboxylate reductase compare
Psyr_4362 -1.0 -2.8 Rare lipoprotein A compare
Psyr_3418 -1.0 -3.5 PilT protein, N-terminal compare
Psyr_3127 -1.0 -2.8 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_4015 -1.0 -1.7 conserved domain protein compare
Psyr_1227 -1.0 -2.1 Queuosine biosynthesis protein compare
Psyr_1350 -1.0 -2.7 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_1198 -1.0 -2.3 type III secretion protein HrpF compare
Psyr_3199 -1.0 -2.2 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_1212 -0.9 -2.5 type III secretion protein HrpO compare
Psyr_1975 -0.9 -2.4 Integrase, catalytic region compare
Psyr_0259 -0.9 -2.0 Osmolarity sensor protein envZ compare
Psyr_2488 -0.9 -1.9 hypothetical protein compare
Psyr_RNA61 -0.9 -2.8 tRNA-Gly compare
Psyr_3620 -0.9 -1.8 hypothetical protein compare
Psyr_0784 -0.9 -1.7 CheW-like protein compare
Psyr_0394 -0.9 -3.7 Heat shock protein HslU compare
Psyr_0184 -0.9 -2.2 Protein of unknown function DUF484 compare
Psyr_1935 -0.9 -3.3 Protein of unknown function DUF796 compare
Psyr_1404 -0.9 -5.8 Ferritin and Dps compare
Psyr_0724 -0.9 -1.8 conserved hypothetical protein compare
Psyr_1555 -0.9 -2.7 Cobyrinic acid a,c-diamide synthase compare
Psyr_1779 -0.9 -2.5 hypothetical protein compare
Psyr_3152 -0.9 -1.4 hypothetical protein compare
Psyr_2787 -0.9 -2.1 hypothetical protein compare
Psyr_0034 -0.9 -1.0 tryptophan synthase, beta chain compare
Psyr_2854 -0.9 -3.1 conserved hypothetical protein compare
Psyr_1931 -0.9 -4.0 hypothetical protein compare
Psyr_0281 -0.9 -2.7 ABC transporter compare
Psyr_1885 -0.9 -2.0 hypothetical protein compare
Psyr_2251 -0.9 -1.4 Phosphonate metabolism PhnG compare
Psyr_4480 -0.9 -2.1 outer membrane transport energization protein TonB compare
Psyr_0444 -0.9 -1.2 Malonate decarboxylase delta subunit compare
Psyr_4093 -0.9 -3.6 glutamate N-acetyltransferase compare
Psyr_0014 -0.9 -2.7 lipid A biosynthesis acyltransferase compare
Psyr_2030 -0.9 -1.4 Calcium-binding EF-hand compare
Psyr_0822 -0.8 -1.2 1-phosphofructokinase compare
Psyr_1373 -0.8 -1.7 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_2285 -0.8 -1.6 Twin-arginine translocation pathway signal compare
Psyr_4254 -0.8 -1.3 conserved hypothetical protein compare
Psyr_2305 -0.8 -3.1 Natural resistance-associated macrophage protein compare
Psyr_2990 -0.8 -2.5 conserved hypothetical protein compare
Psyr_4057 -0.8 -3.0 regulatory protein, LysR:LysR, substrate-binding protein compare
Psyr_3728 -0.8 -3.1 hypothetical protein compare
Psyr_0528 -0.8 -1.6 Carbamoyltransferase compare
Psyr_3198 -0.8 -1.6 NADH dehydrogenase subunit B compare
Psyr_4622 -0.8 -3.4 Nucleotidyl transferase compare
Psyr_2769 -0.8 -2.5 conserved hypothetical protein compare
Psyr_0535 -0.8 -2.1 toluene tolerance protein, putative compare
Psyr_0436 -0.8 -2.0 Phosphopantetheine-binding protein compare
Psyr_3644 -0.8 -2.3 prephenate dehydrogenase compare
Psyr_5135 -0.8 -1.1 Protein of unknown function DUF37 compare
Psyr_3425 -0.8 -1.5 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp compare
Psyr_3290 -0.8 -2.5 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_2621 -0.8 -2.8 Secretion protein HlyD compare
Psyr_0919 -0.8 -5.1 Chromosome segregation ATPase-like protein compare
Psyr_0319 -0.8 -4.2 conserved hypothetical protein compare
Psyr_2520 -0.8 -1.5 SOS-response transcriptional repressor, LexA compare
Psyr_1371 -0.8 -3.9 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_4194 -0.7 -2.6 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_3807 -0.7 -3.6 hypothetical protein compare
Psyr_0529 -0.7 -1.6 Glycosyl transferase, group 1 compare
Psyr_2433 -0.7 -1.6 conserved hypothetical protein compare
Psyr_5129 -0.7 -2.1 chromosome segregation DNA-binding protein compare
Psyr_0579 -0.7 -4.9 RNAse R compare
Psyr_1121 -0.7 -1.3 6-phosphogluconolactonase compare
Psyr_5133 -0.7 -2.4 tRNA modification GTPase trmE compare
Psyr_2778 -0.7 -1.7 Phage minor tail protein L compare
Psyr_5065 -0.7 -4.4 ATP-dependent DNA helicase UvrD compare
Psyr_2564 -0.7 -2.3 transcriptional regulator, GntR family compare
Psyr_0638 -0.7 -2.1 Peptidase S16, lon N-terminal compare
Psyr_3358 -0.7 -1.7 transmembrane pair compare
Psyr_1317 -0.7 -1.5 conserved hypothetical protein compare
Psyr_2855 -0.7 -2.1 methionine synthase (B12-independent) compare
Psyr_2642 -0.7 -2.1 hypothetical protein compare
Psyr_3658 -0.7 -4.4 Rhodanese-like protein compare
Psyr_2398 -0.7 -2.1 ABC transporter compare
Psyr_4118 -0.7 -3.6 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal compare
Psyr_4278 -0.7 -1.4 regulatory protein, LuxR compare
Psyr_5130 -0.7 -4.2 chromosome segregation ATPase compare
Psyr_3626 -0.7 -2.3 transcriptional regulator, MarR family compare
Psyr_4804 -0.7 -2.0 conserved hypothetical protein compare
Psyr_2827 -0.7 -2.6 phage-related protein compare
Psyr_4112 -0.7 -4.1 Protein of unknown function UPF0011 compare
Psyr_0268 -0.7 -1.3 DSBA oxidoreductase compare
Psyr_2651 -0.7 -3.4 conserved hypothetical protein compare
Psyr_2184 -0.7 -1.8 Short-chain dehydrogenase/reductase SDR compare
Psyr_2456 -0.7 -1.7 Short-chain dehydrogenase/reductase SDR compare
Psyr_2897 -0.7 -3.1 regulatory protein, LuxR:Response regulator receiver compare
Psyr_2211 -0.7 -1.7 monooxygenase, NtaA/SnaA/SoxA family compare
Psyr_1749 -0.7 -3.5 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_4350 -0.7 -1.8 Protein of unknown function DUF218 compare
Psyr_2808 -0.6 -1.1 hypothetical protein compare
Psyr_3164 -0.6 -3.6 Protein of unknown function UPF0005 compare
Psyr_3680 -0.6 -2.2 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase compare
Psyr_1747 -0.6 -2.1 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_2203 -0.6 -2.4 amino acid/amide ABC transporter membrane protein 2, HAAT family compare
Psyr_0857 -0.6 -1.5 [SSU ribosomal protein S18P]-alanine acetyltransferase compare
Psyr_0033 -0.6 -0.7 tryptophan synthase, alpha chain compare
Psyr_4609 -0.6 -4.5 anthranilate synthase, component I compare
Psyr_1934 -0.6 -2.7 conserved hypothetical protein compare
Psyr_2807 -0.6 -0.9 NinB compare
Psyr_4996 -0.6 -3.5 hypothetical protein compare
Psyr_0736 -0.6 -2.0 umuC protein compare
Psyr_2620 -0.6 -1.1 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_3841 -0.6 -1.3 conserved hypothetical protein compare
Psyr_2259 -0.6 -1.4 Beta-lactamase-like protein compare
Psyr_4979 -0.6 -2.9 hypothetical protein compare
Psyr_2056 -0.6 -1.9 CHAD compare
Psyr_4519 -0.6 -3.0 General substrate transporter:Major facilitator superfamily compare
Psyr_2095 -0.6 -2.6 Conserved TM helix compare
Psyr_4682 -0.6 -1.3 conserved hypothetical protein compare
Psyr_2639 -0.6 -3.3 hypothetical protein compare
Psyr_3156 -0.6 -2.7 transcriptional regulator, LysR family compare
Psyr_2880 -0.6 -2.9 conserved hypothetical protein compare
Psyr_2332 -0.6 -1.4 conserved hypothetical protein compare
Psyr_0817 -0.6 -1.8 N-acetylmuramoyl-L-alanine amidase, family 2 compare
Psyr_2518 -0.6 -2.6 conserved hypothetical protein compare
Psyr_0875 -0.6 -2.1 outer membrane transport energization protein TonB compare
Psyr_0920 -0.6 -4.8 Glycosyl transferase, group 1 compare
Psyr_3522 -0.6 -2.8 L-serine ammonia-lyase compare
Psyr_4055 -0.6 -1.3 conserved domain protein compare
Psyr_1329 -0.6 -1.5 conserved hypothetical protein compare
Psyr_3677 -0.6 -1.5 Aminotransferase, class I and II compare
Psyr_1989 -0.6 -2.7 galactonate dehydratase compare
Psyr_1903 -0.6 -1.2 conserved hypothetical protein compare
Psyr_4601 -0.6 -1.2 hypothetical protein compare
Psyr_3346 -0.6 -2.3 conserved hypothetical protein compare
Psyr_2650 -0.6 -2.5 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Mexicanolide across organisms