Experiment set11IT065 for Klebsiella michiganensis M5al

Compare to:

2'-Deoxycytidine 5 mM carbon source

200 most important genes:

  gene name fitness t score description  
BWI76_RS20355 -8.0 -5.4 colicin V production protein compare
BWI76_RS18950 -7.2 -5.0 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS09760 -7.2 -5.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS18935 -7.1 -7.0 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS21465 -7.1 -4.9 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS18930 -7.0 -6.3 histidinol-phosphate transaminase compare
BWI76_RS04685 -6.9 -6.7 putative leucine operon leader peptide compare
BWI76_RS01655 -6.7 -8.0 homoserine O-succinyltransferase compare
BWI76_RS04465 -6.5 -4.5 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04160 -6.4 -6.3 phosphoserine phosphatase compare
BWI76_RS00980 -5.9 -8.1 PLP-dependent threonine dehydratase compare
BWI76_RS04470 -5.8 -10.4 carbamoyl phosphate synthase large subunit compare
BWI76_RS08385 -5.7 -3.5 citrate (Si)-synthase compare
BWI76_RS07070 -5.7 -5.1 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS02815 -5.6 -3.8 fructose-bisphosphatase class I compare
BWI76_RS20895 -5.5 -6.5 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS04130 -5.5 -7.2 2-deoxyribose-5-phosphate aldolase compare
BWI76_RS00835 -5.4 -13.0 phosphoenolpyruvate carboxylase compare
BWI76_RS04670 -5.4 -9.6 3-isopropylmalate dehydratase large subunit compare
BWI76_RS20350 -5.4 -5.6 amidophosphoribosyltransferase compare
BWI76_RS05835 -5.2 -3.6 gamma-glutamyl-phosphate reductase compare
BWI76_RS01615 -5.0 -9.6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS00850 -5.0 -7.3 acetylglutamate kinase compare
BWI76_RS04255 -5.0 -9.1 threonine synthase compare
BWI76_RS18920 -5.0 -3.8 ATP phosphoribosyltransferase compare
BWI76_RS00990 -5.0 -8.9 ketol-acid reductoisomerase compare
BWI76_RS00855 -5.0 -7.4 argininosuccinate lyase compare
BWI76_RS04675 -4.9 -7.7 3-isopropylmalate dehydrogenase compare
BWI76_RS09645 -4.8 -1.9 thioredoxin-disulfide reductase compare
BWI76_RS11850 -4.8 -9.6 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS21475 -4.8 -6.5 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS04665 -4.6 -19.4 3-isopropylmalate dehydratase small subunit compare
BWI76_RS21265 -4.6 -13.5 phosphoribosylformylglycinamidine synthase compare
BWI76_RS04245 -4.6 -14.1 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS20965 -4.6 -3.1 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS24285 -4.5 -6.8 cystathionine beta-lyase compare
BWI76_RS04250 -4.5 -7.0 homoserine kinase compare
BWI76_RS09755 -4.5 -8.3 phosphoserine transaminase compare
BWI76_RS00805 -4.5 -4.7 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS18925 -4.4 -8.9 histidinol dehydrogenase compare
BWI76_RS05840 -4.3 -6.5 glutamate 5-kinase compare
BWI76_RS01210 -4.2 -3.6 tyrosine recombinase XerC compare
BWI76_RS11840 -4.2 -5.7 tryptophan synthase subunit alpha compare
BWI76_RS04645 -4.1 -7.7 3-dehydroquinase compare
BWI76_RS04135 -4.1 -4.7 thymidine phosphorylase compare
BWI76_RS23220 -4.1 -6.6 amino-acid N-acetyltransferase compare
BWI76_RS04240 -4.0 -1.8 thr operon leader peptide compare
BWI76_RS04680 -3.9 -10.8 2-isopropylmalate synthase compare
BWI76_RS25115 -3.8 -4.7 argininosuccinate synthase compare
BWI76_RS23365 -3.8 -8.4 LysR family transcriptional regulator compare
BWI76_RS06185 -3.8 -8.4 shikimate kinase II compare
BWI76_RS03010 -3.7 -7.3 ornithine carbamoyltransferase compare
BWI76_RS11855 -3.7 -5.2 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS09660 -3.7 -2.5 DNA translocase FtsK compare
BWI76_RS23920 -3.7 -5.9 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS00785 -3.7 -5.7 cystathionine gamma-synthase compare
BWI76_RS11860 -3.6 -7.5 anthranilate synthase component I compare
BWI76_RS01610 -3.5 -5.0 phosphoribosylamine--glycine ligase compare
BWI76_RS19610 -3.5 -6.0 Cytidine deaminase (EC 3.5.4.5) (from data) compare
BWI76_RS00845 -3.5 -8.0 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS18940 -3.4 -4.5 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS07065 -3.3 -6.6 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS00975 -3.3 -5.4 dihydroxy-acid dehydratase compare
BWI76_RS18955 -3.2 -4.8 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS20160 -3.1 -4.8 NADH-quinone oxidoreductase subunit H compare
BWI76_RS22765 -3.0 -12.6 sulfite reductase subunit alpha compare
BWI76_RS05015 -3.0 -3.5 transcriptional regulator compare
BWI76_RS11845 -3.0 -3.6 tryptophan synthase subunit beta compare
BWI76_RS03595 -3.0 -1.6 ethanolamine utilization protein EutM compare
BWI76_RS14075 -3.0 -2.1 TetR family transcriptional regulator compare
BWI76_RS14935 -2.9 -1.9 NIPSNAP family containing protein compare
BWI76_RS22755 -2.9 -6.4 phosphoadenosine phosphosulfate reductase compare
BWI76_RS23480 -2.9 -12.5 EAL domain-containing protein compare
BWI76_RS01200 -2.8 -3.2 diaminopimelate epimerase compare
BWI76_RS01185 -2.6 -1.8 adenylate cyclase compare
BWI76_RS20145 -2.5 -2.4 NADH-quinone oxidoreductase subunit K compare
BWI76_RS00965 -2.5 -1.7 acetolactate synthase 2 small subunit compare
BWI76_RS04510 -2.5 -2.8 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS26175 -2.4 -3.7 DeoR/GlpR family transcriptional regulator compare
BWI76_RS22760 -2.4 -6.7 sulfite reductase subunit beta compare
BWI76_RS09640 -2.3 -2.4 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS15850 -2.3 -2.7 DUF1317 domain-containing protein compare
BWI76_RS23240 -2.3 -4.5 exonuclease V subunit gamma compare
BWI76_RS23360 -2.3 -2.3 diaminopimelate decarboxylase compare
BWI76_RS05570 -2.3 -1.7 hypothetical protein compare
BWI76_RS20435 -2.3 -1.5 chorismate synthase compare
BWI76_RS20170 -2.2 -5.6 NADH-quinone oxidoreductase subunit F compare
BWI76_RS00985 -2.2 -4.4 transcriptional regulator IlvY compare
BWI76_RS04305 -2.1 -1.6 molecular chaperone DnaJ compare
BWI76_RS03080 -2.1 -3.0 (Fe-S)-cluster assembly protein compare
BWI76_RS20150 -2.1 -2.2 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS22690 -2.1 -4.1 adenylyl-sulfate kinase compare
BWI76_RS09970 -2.0 -4.7 porin OmpA compare
BWI76_RS20155 -2.0 -2.3 NADH-quinone oxidoreductase subunit I compare
BWI76_RS25280 -1.9 -2.4 RNase adaptor protein RapZ compare
BWI76_RS01350 -1.9 -1.4 NAD(P)H-flavin reductase compare
BWI76_RS11335 -1.9 -2.1 tautomerase compare
BWI76_RS04705 -1.9 -4.7 DNA-binding transcriptional regulator FruR compare
BWI76_RS22240 -1.9 -6.5 transcriptional regulator compare
BWI76_RS02095 -1.8 -8.7 acetyl-coenzyme A synthetase compare
BWI76_RS27820 -1.8 -2.3 ilvB operon leader peptide IvbL compare
BWI76_RS20140 -1.8 -5.6 NADH-quinone oxidoreductase subunit L compare
BWI76_RS15825 -1.8 -1.5 hypothetical protein compare
BWI76_RS20135 -1.8 -2.8 NADH-quinone oxidoreductase subunit M compare
BWI76_RS04140 -1.8 -2.3 phosphopentomutase compare
BWI76_RS05120 -1.8 -6.0 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS21070 -1.8 -2.9 outer membrane protein assembly factor BamB compare
BWI76_RS20270 -1.8 -4.5 hypothetical protein compare
BWI76_RS01885 -1.7 -1.4 CsbD family protein compare
BWI76_RS20165 -1.7 -4.1 NADH-quinone oxidoreductase subunit G compare
BWI76_RS01070 -1.7 -7.9 thiol reductase thioredoxin compare
BWI76_RS09635 -1.7 -2.5 amino acid ABC transporter ATP-binding protein compare
BWI76_RS21140 -1.7 -3.4 molecular chaperone HscA compare
BWI76_RS11520 -1.7 -1.5 hypothetical protein compare
BWI76_RS05260 -1.6 -2.2 chaperone compare
BWI76_RS17525 -1.6 -2.6 XshC-Cox1-family protein compare
BWI76_RS02610 -1.6 -6.0 transcriptional regulator compare
BWI76_RS21985 -1.5 -6.3 acetaldehyde dehydrogenase (EC 1.2.1.3) (from data) compare
BWI76_RS26075 -1.5 -3.2 DNA adenine methylase compare
BWI76_RS24900 -1.5 -1.4 DeoR family transcriptional regulator compare
BWI76_RS23230 -1.5 -3.3 exodeoxyribonuclease V subunit beta compare
BWI76_RS26055 -1.5 -6.0 siroheme synthase compare
BWI76_RS12090 -1.5 -1.7 HNH endonuclease compare
BWI76_RS20190 -1.5 -5.5 NADH-quinone oxidoreductase subunit A compare
BWI76_RS06525 -1.5 -3.2 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS12330 -1.4 -2.6 hypothetical protein compare
BWI76_RS25000 -1.4 -1.3 malonate decarboxylase acyl carrier protein compare
BWI76_RS13250 -1.4 -1.4 cytochrome b561 compare
BWI76_RS20180 -1.4 -3.7 NADH-quinone oxidoreductase subunit C/D compare
BWI76_RS05450 -1.4 -1.7 ribonuclease HI compare
BWI76_RS03415 -1.4 -3.5 LacI family transcriptional regulator compare
BWI76_RS21990 -1.4 -5.3 ATPase AAA compare
BWI76_RS19330 -1.3 -1.3 HAD family hydrolase compare
BWI76_RS27475 -1.3 -7.4 regulatory protein GntR family protein compare
BWI76_RS20995 -1.3 -2.9 RNA degradosome polyphosphate kinase compare
BWI76_RS02735 -1.3 -2.5 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS20910 -1.3 -6.2 glycine cleavage system transcriptional repressor compare
BWI76_RS06015 -1.3 -1.5 hypothetical protein compare
BWI76_RS20130 -1.2 -4.1 NADH-quinone oxidoreductase subunit N compare
BWI76_RS21810 -1.2 -2.0 universal stress protein compare
BWI76_RS00400 -1.2 -0.7 glutamine synthetase compare
BWI76_RS01205 -1.2 -1.9 DUF484 family protein compare
BWI76_RS15835 -1.2 -0.9 hypothetical protein compare
BWI76_RS06465 -1.2 -1.6 IclR family transcriptional regulator compare
BWI76_RS02410 -1.2 -1.3 EF-P beta-lysylation protein EpmB compare
BWI76_RS05200 -1.2 -2.2 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS27815 -1.2 -6.2 acetolactate synthase catalytic subunit compare
BWI76_RS07465 -1.2 -2.6 TetR family transcriptional regulator compare
BWI76_RS24850 -1.2 -5.3 DeoR family transcriptional regulator compare
BWI76_RS08520 -1.2 -2.2 colicin transporter TolQ compare
BWI76_RS08380 -1.2 -1.9 endonuclease VIII compare
BWI76_RS26085 -1.2 -1.3 3-dehydroquinate synthase compare
BWI76_RS05680 -1.2 -2.1 LacI family transcriptional regulator compare
BWI76_RS21450 -1.2 -2.2 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS07120 -1.1 -5.8 LacI family transcriptional regulator compare
BWI76_RS27075 -1.1 -4.7 IclR family transcriptional regulator compare
BWI76_RS12240 -1.1 -3.2 terminase small subunit compare
BWI76_RS12345 -1.1 -3.2 nitrite transporter compare
BWI76_RS06730 -1.1 -2.0 lac repressor compare
BWI76_RS21480 -1.1 -3.5 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS26570 -1.1 -2.3 anion permease compare
BWI76_RS21345 -1.1 -2.6 sigma-E factor regulatory protein RseB compare
BWI76_RS12465 -1.1 -1.0 phage shock protein D compare
BWI76_RS09190 -1.1 -3.0 hypothetical protein compare
BWI76_RS08530 -1.1 -2.3 protein TolA compare
BWI76_RS26805 -1.1 -1.8 cellulose biosynthesis protein BcsF compare
BWI76_RS15840 -1.1 -2.4 prophage protein compare
BWI76_RS06490 -1.1 -3.7 cytochrome ubiquinol oxidase subunit I compare
BWI76_RS06495 -1.1 -4.5 cytochrome ubiquinol oxidase subunit II compare
BWI76_RS15830 -1.1 -1.9 hypothetical protein compare
BWI76_RS12195 -1.1 -2.7 hypothetical protein compare
BWI76_RS01125 -1.1 -3.6 4-alpha-L-fucosyltransferase compare
BWI76_RS13595 -1.0 -4.0 transcriptional regulator compare
BWI76_RS08535 -1.0 -1.4 translocation protein TolB compare
BWI76_RS20440 -1.0 -1.7 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS25920 -1.0 -1.0 peptidylprolyl isomerase compare
BWI76_RS13435 -1.0 -1.4 hypothetical protein compare
BWI76_RS09610 -1.0 -3.3 ATP-dependent Clp protease adaptor ClpS compare
BWI76_RS23055 -1.0 -3.0 cobalamin biosynthesis protein CbiG compare
BWI76_RS23970 -1.0 -1.7 mechanosensitive ion channel protein MscS compare
BWI76_RS04625 -1.0 -1.5 glucose uptake inhibitor SgrT compare
BWI76_RS16895 -1.0 -1.4 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS09390 -1.0 -1.8 phage tail protein compare
BWI76_RS20970 -1.0 -1.1 phosphoribosylglycinamide formyltransferase compare
BWI76_RS14825 -1.0 -2.0 dienelactone hydrolase family protein compare
BWI76_RS01995 -1.0 -1.1 AraC family transcriptional regulator compare
BWI76_RS24080 -1.0 -1.7 DUF179 domain-containing protein compare
BWI76_RS05005 -1.0 -1.9 polynucleotide adenylyltransferase compare
BWI76_RS03105 -1.0 -1.0 myo-inosose-2 dehydratase compare
BWI76_RS27735 -0.9 -1.3 hypothetical protein compare
BWI76_RS11900 -0.9 -1.0 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
BWI76_RS15225 -0.9 -3.2 DeoR family transcriptional regulator compare
BWI76_RS25630 -0.9 -1.8 hypothetical protein compare
BWI76_RS27170 -0.9 -2.8 MltR family transcriptional regulator compare
BWI76_RS20640 -0.9 -2.6 cysteine synthase A compare
BWI76_RS13050 -0.9 -1.4 transcriptional regulator compare
BWI76_RS19730 -0.9 -1.8 1-phosphofructokinase compare
BWI76_RS05790 -0.9 -1.2 phage DNA-binding protein compare
BWI76_RS09690 -0.9 -1.4 dimethyl sulfoxide reductase compare
BWI76_RS08430 -0.9 -3.7 succinate--CoA ligase subunit alpha compare


Specific Phenotypes

For 7 genes in this experiment

For carbon source 2'-Deoxycytidine in Klebsiella michiganensis M5al

For carbon source 2'-Deoxycytidine across organisms