Experiment set11IT065 for Klebsiella michiganensis M5al

Compare to:

2'-Deoxycytidine 5 mM carbon source

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS00765 +7.8 41.7 DNA-binding transcriptional regulator CytR compare
BWI76_RS25060 +2.6 12.1 lipoprotein NlpI compare
BWI76_RS17975 +2.1 6.9 tail-specific protease compare
BWI76_RS25065 +2.1 6.8 polyribonucleotide nucleotidyltransferase compare
BWI76_RS12170 +1.9 1.9 hypothetical protein compare
BWI76_RS01800 +1.6 5.0 glucose-6-phosphate isomerase compare
BWI76_RS15990 +1.5 4.6 serine protease compare
BWI76_RS05075 +1.4 1.7 type II secretion system protein GspG compare
BWI76_RS21245 +1.4 4.1 nitrogen regulatory protein P-II compare
BWI76_RS13240 +1.4 2.1 hypothetical protein compare
BWI76_RS11820 +1.4 1.8 short-chain dehydrogenase/reductase SDR compare
BWI76_RS21375 +1.3 2.7 autonomous glycyl radical cofactor GrcA compare
BWI76_RS01775 +1.3 1.9 hypothetical protein compare
BWI76_RS06405 +1.3 2.8 2-dehydropantoate 2-reductase compare
BWI76_RS19325 +1.3 2.6 mandelate racemase compare
BWI76_RS15700 +1.2 4.5 hypothetical protein compare
BWI76_RS24170 +1.2 7.0 nucleoside permease compare
BWI76_RS25225 +1.2 3.1 ABC transporter permease compare
BWI76_RS19605 +1.2 2.4 CidB/LrgB family autolysis modulator compare
BWI76_RS00240 +1.2 2.4 FMN-binding protein MioC compare
BWI76_RS01330 +1.2 3.6 twin-arginine translocase subunit TatC compare
BWI76_RS15600 +1.2 3.2 hypothetical protein compare
BWI76_RS15725 +1.2 2.7 hypothetical protein compare
BWI76_RS19700 +1.2 2.5 deoxyribonuclease IV compare
BWI76_RS15720 +1.2 3.8 prophage protein NinE compare
BWI76_RS00305 +1.1 6.3 GntR family transcriptional regulator compare
BWI76_RS02745 +1.1 1.9 hypothetical protein compare
BWI76_RS15735 +1.1 3.1 hypothetical protein compare
BWI76_RS15740 +1.1 1.7 HNH endonuclease compare
BWI76_RS10575 +1.1 1.5 polar amino acid ABC transporter permease compare
BWI76_RS12680 +1.1 3.4 oxidoreductase compare
BWI76_RS01935 +1.0 2.3 thiamin phosphate synthase compare
BWI76_RS19705 +1.0 2.9 kinase compare
BWI76_RS06375 +1.0 2.8 oxidoreductase compare
BWI76_RS15770 +1.0 3.7 hypothetical protein compare
BWI76_RS08970 +1.0 2.4 glutamine ABC transporter permease GlnP compare
BWI76_RS13545 +1.0 1.5 N-acetyltransferase compare
BWI76_RS15570 +1.0 3.5 phage antirepressor Ant compare
BWI76_RS21235 +1.0 1.4 hypothetical protein compare
BWI76_RS20230 +1.0 1.1 hypothetical protein compare
BWI76_RS16315 +1.0 1.9 SirA-like protein compare
BWI76_RS01565 +0.9 1.5 NADH pyrophosphatase compare
BWI76_RS27425 +0.9 2.0 DNA-directed RNA polymerase subunit omega compare
BWI76_RS15665 +0.9 5.2 hypothetical protein compare
BWI76_RS18800 +0.9 3.2 transcriptional regulator compare
BWI76_RS15745 +0.9 4.2 hypothetical protein compare
BWI76_RS21340 +0.9 1.8 SoxR reducing system protein RseC compare
BWI76_RS15575 +0.9 5.3 hypothetical protein compare
BWI76_RS20795 +0.9 1.2 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS18550 +0.9 1.5 tRNA-Asn compare
BWI76_RS19480 +0.9 1.8 transcriptional regulator compare
BWI76_RS19515 +0.9 2.5 D-lactate dehydrogenase (cytochrome c-553) (EC 1.1.2.5) (from data) compare
BWI76_RS05950 +0.9 1.5 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS09730 +0.9 1.2 pyruvate formate lyase 1-activating protein compare
BWI76_RS27395 +0.9 2.6 hypothetical protein compare
BWI76_RS19920 +0.9 3.9 hybrid sensor histidine kinase/response regulator compare
BWI76_RS09860 +0.8 2.3 hypothetical protein compare
BWI76_RS09500 +0.8 3.6 arginine ABC transporter substrate-binding protein compare
BWI76_RS09255 +0.8 1.6 hypothetical protein compare
BWI76_RS15765 +0.8 4.2 hypothetical protein compare
BWI76_RS06290 +0.8 1.7 ACP phosphodiesterase compare
BWI76_RS11835 +0.8 1.7 putative regulatory protein MarR compare
BWI76_RS16900 +0.8 1.5 4-hydroxy-2-oxovalerate aldolase compare
BWI76_RS25655 +0.8 1.6 DNA topoisomerase type IA zn finger domain-containing protein compare
BWI76_RS07740 +0.8 1.4 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS16910 +0.8 1.8 2-keto-4-pentenoate hydratase compare
BWI76_RS16690 +0.8 2.2 peptide ABC transporter permease compare
BWI76_RS22940 +0.8 3.7 DNA-binding transcriptional activator FucR compare
BWI76_RS22815 +0.8 5.1 hybrid sensor histidine kinase/response regulator compare
BWI76_RS16515 +0.8 1.7 LysR family transcriptional regulator compare
BWI76_RS05050 +0.8 1.7 general secretion pathway protein GspL compare
BWI76_RS14735 +0.8 1.8 type 11 methyltransferase compare
BWI76_RS18410 +0.8 1.7 drug/metabolite exporter YedA compare
BWI76_RS13770 +0.8 1.7 alkylhydroperoxidase domain protein compare
BWI76_RS23760 +0.8 1.4 tRNA-Gly compare
BWI76_RS06175 +0.8 2.0 DUF188 domain-containing protein compare
BWI76_RS14415 +0.8 2.1 transcriptional regulator, TetR family protein compare
BWI76_RS08765 +0.8 1.4 8-amino-7-oxononanoate synthase compare
BWI76_RS20035 +0.8 2.3 hypothetical protein compare
BWI76_RS13755 +0.8 1.8 hypothetical protein compare
BWI76_RS15535 +0.8 2.3 hypothetical protein compare
BWI76_RS16805 +0.8 1.3 basic amino acid ABC transporter substrate-binding protein compare
BWI76_RS05700 +0.8 3.2 coenzyme F420-dependent NADP oxidoreductase compare
BWI76_RS09305 +0.8 2.7 hypothetical protein compare
BWI76_RS10040 +0.7 1.6 heat-shock protein HspQ compare
BWI76_RS15555 +0.7 4.4 hypothetical protein compare
BWI76_RS15620 +0.7 1.5 hypothetical protein compare
BWI76_RS15715 +0.7 2.0 putative ninG protein compare
BWI76_RS16785 +0.7 3.8 peptidase M20 compare
BWI76_RS15730 +0.7 2.4 hypothetical protein compare
BWI76_RS12040 +0.7 1.1 hypothetical protein compare
BWI76_RS18335 +0.7 4.3 DNA-binding response regulator compare
BWI76_RS00180 +0.7 1.1 F0F1 ATP synthase subunit epsilon compare
BWI76_RS15630 +0.7 3.4 hypothetical protein compare
BWI76_RS17155 +0.7 1.7 hypothetical protein compare
BWI76_RS08515 +0.7 1.8 acyl-CoA thioesterase YbgC compare
BWI76_RS15560 +0.7 4.9 hypothetical protein compare
BWI76_RS13380 +0.7 1.4 hypothetical protein compare
BWI76_RS08100 +0.7 1.9 glutamate/aspartate transporter permease GltK compare
BWI76_RS09335 +0.7 1.1 baseplate assembly protein W compare
BWI76_RS04050 +0.7 2.4 hydroxamate siderophore iron reductase FhuF compare
BWI76_RS15670 +0.7 2.4 hypothetical protein compare
BWI76_RS14800 +0.7 2.9 non-heme chloroperoxidase compare
BWI76_RS02255 +0.7 2.9 chaperone-modulator protein CbpM compare
BWI76_RS12670 +0.7 1.6 DNA polymerase V subunit UmuD compare
BWI76_RS18915 +0.7 1.2 NAD(P)-dependent oxidoreductase compare
BWI76_RS11515 +0.7 0.8 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS13955 +0.7 1.1 hypothetical protein compare
BWI76_RS15760 +0.7 1.2 hypothetical protein compare
BWI76_RS09765 +0.7 1.5 metalloprotease compare
BWI76_RS05860 +0.7 2.4 alkanesulfonates-binding protein compare
BWI76_RS21115 +0.7 1.2 3-mercaptopyruvate sulfurtransferase compare
BWI76_RS24330 +0.7 1.5 TIGR00156 family protein compare
BWI76_RS00560 +0.7 2.3 hypothetical protein compare
BWI76_RS18745 +0.7 1.5 adenosylhomocysteinase compare
BWI76_RS18675 +0.7 2.9 fimbrial protein compare
BWI76_RS16375 +0.7 2.3 electron transport complex subunit G compare
BWI76_RS10820 +0.7 2.4 iron uptake system protein EfeO compare
BWI76_RS13960 +0.7 2.6 urea ABC transporter periplasmic protein compare
BWI76_RS21675 +0.7 0.6 hypothetical protein compare
BWI76_RS15650 +0.7 1.3 gp5 compare
BWI76_RS20810 +0.7 2.5 ethanolamine utilization cobalamin adenosyltransferase compare
BWI76_RS26260 +0.7 2.4 hypothetical protein compare
BWI76_RS00865 +0.7 2.0 DNA-binding transcriptional regulator OxyR compare
BWI76_RS23765 +0.7 2.8 peptidase M23 compare
BWI76_RS06665 +0.7 1.9 membrane protein compare
BWI76_RS14755 +0.7 1.9 SIS domain-containing protein compare
BWI76_RS26130 +0.7 1.2 ADP compounds hydrolase NudE compare
BWI76_RS05955 +0.7 2.5 ABC transporter compare
BWI76_RS15695 +0.7 2.2 hypothetical protein compare
BWI76_RS15815 +0.7 4.4 hypothetical protein compare
BWI76_RS23555 +0.7 2.1 type 1 major fimbrial subunit precursor compare
BWI76_RS15500 +0.7 5.3 hypothetical protein compare
BWI76_RS09180 +0.7 2.8 hypothetical protein compare
BWI76_RS11920 +0.7 1.6 hypothetical protein compare
BWI76_RS12185 +0.7 1.1 hypothetical protein compare
BWI76_RS13215 +0.7 1.0 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS11110 +0.6 1.4 cell division protein YceG compare
BWI76_RS06735 +0.6 1.4 50S ribosomal protein L31 compare
BWI76_RS19595 +0.6 1.6 hypothetical protein compare
BWI76_RS23895 +0.6 1.3 Xaa-Pro aminopeptidase compare
BWI76_RS19615 +0.6 1.8 vancomycin high temperature exclusion protein compare
BWI76_RS19885 +0.6 2.0 multidrug ABC transporter permease/ATP-binding protein compare
BWI76_RS00295 +0.6 3.3 transcriptional regulator RbsR compare
BWI76_RS13980 +0.6 1.2 hypothetical protein compare
BWI76_RS16965 +0.6 2.6 murein lipoprotein compare
BWI76_RS11150 +0.6 1.1 membrane protein compare
BWI76_RS20455 +0.6 2.7 multifunctional fatty acid oxidation complex subunit alpha compare
BWI76_RS25485 +0.6 1.3 septum formation protein Maf compare
BWI76_RS16335 +0.6 1.3 division septum protein Blr compare
BWI76_RS10770 +0.6 1.4 pyrimidine utilization protein C compare
BWI76_RS15645 +0.6 2.8 gp6 compare
BWI76_RS18005 +0.6 2.3 hypothetical protein compare
BWI76_RS19695 +0.6 1.4 membrane protein compare
BWI76_RS20890 +0.6 2.9 neutral zinc metallopeptidase compare
BWI76_RS02615 +0.6 2.5 L-ascorbate-6-phosphate lactonase compare
BWI76_RS00875 +0.6 2.7 DNA-binding transcriptional regulator FabR compare
BWI76_RS19585 +0.6 1.0 gentisate 1,2-dioxygenase compare
BWI76_RS16090 +0.6 1.5 two-component system response regulator DcuR compare
BWI76_RS20335 +0.6 1.8 zinc transporter compare
BWI76_RS18870 +0.6 1.0 protein NifZ compare
BWI76_RS24470 +0.6 2.5 hypothetical protein compare
BWI76_RS18125 +0.6 2.5 murein DD-endopeptidase MepM compare
BWI76_RS10635 +0.6 2.4 GGDEF domain-containing protein compare
BWI76_RS04010 +0.6 1.6 hypothetical protein compare
BWI76_RS26410 +0.6 1.4 membrane protein compare
BWI76_RS16675 +0.6 1.1 ABC transporter compare
BWI76_RS03800 +0.6 2.0 hypothetical protein compare
BWI76_RS18535 +0.6 3.3 alpha/beta hydrolase compare
BWI76_RS21495 +0.6 2.3 outer membrane lipoprotein compare
BWI76_RS00720 +0.6 1.1 DNA-binding response regulator compare
BWI76_RS24070 +0.6 1.6 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
BWI76_RS22270 +0.6 1.8 nickel transporter compare
BWI76_RS15595 +0.6 3.0 hypothetical protein compare
BWI76_RS02595 +0.6 2.2 hypothetical protein compare
BWI76_RS25365 +0.6 3.0 serine endoprotease DegQ compare
BWI76_RS14005 +0.6 1.0 TetR family transcriptional regulator compare
BWI76_RS17565 +0.6 1.2 hypothetical protein compare
BWI76_RS20725 +0.6 2.9 GNAT family acetyltransferase compare
BWI76_RS24610 +0.6 2.1 dihydroxyacetone kinase compare
BWI76_RS15130 +0.6 2.0 hypothetical protein compare
BWI76_RS25935 +0.6 1.4 glutathione-regulated potassium-efflux system ancillary protein KefG compare
BWI76_RS11370 +0.6 1.4 iron-dicitrate transporter subunit FecD compare
BWI76_RS16760 +0.6 1.2 lipase compare
BWI76_RS03555 +0.6 2.5 hypothetical protein compare
BWI76_RS21460 +0.6 0.9 translation inhibitor protein RaiA compare
BWI76_RS10745 +0.6 0.7 hypothetical protein compare
BWI76_RS16485 +0.6 0.7 ribonuclease T compare
BWI76_RS19405 +0.6 2.2 LysR family transcriptional regulator compare
BWI76_RS12420 +0.6 0.8 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS15525 +0.6 3.3 hypothetical protein compare
BWI76_RS13880 +0.6 2.3 lysine transporter LysE compare
BWI76_RS23560 +0.6 1.9 hypothetical protein compare
BWI76_RS08500 +0.6 2.5 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS16755 +0.6 1.7 acetoin reductase compare
BWI76_RS16645 +0.6 1.1 DeoR family transcriptional regulator compare
BWI76_RS03925 +0.6 2.0 N-acetyltransferase GCN5 compare
BWI76_RS11895 +0.6 1.2 AraC family transcriptional regulator compare
BWI76_RS17660 +0.6 2.1 AraC/XylS familytranscription regulator compare
BWI76_RS15675 +0.6 3.2 hypothetical protein compare


Specific Phenotypes

For 7 genes in this experiment

For carbon source 2'-Deoxycytidine in Klebsiella michiganensis M5al

For carbon source 2'-Deoxycytidine across organisms