Experiment set11IT065 for Bacteroides thetaiotaomicron VPI-5482

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Fructooligosaccharides (FOS) carbon source

200 most important genes:

  gene name fitness t score description  
BT0892 -4.5 -2.8 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT3395 -4.3 -7.7 N-succinylglutamate kinase (EC 2.7.2.-) (from data) compare
BT1843 -4.1 -3.9 adenylosuccinate synthetase (NCBI ptt file) compare
BT3933 -3.9 -7.0 prephenate dehydrogenase (EC 1.3.1.13) (from data) compare
BT1757 -3.9 -5.9 fructokinase (NCBI ptt file) compare
BT2302 -3.8 -1.5 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT3733 -3.7 -10.2 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
BT3719 -3.7 -5.0 glutamate 5-kinase (EC 2.7.2.11) (from data) compare
BT1377 -3.6 -3.5 phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase (NCBI ptt file) compare
BT2401 -3.5 -8.8 threonine synthase (NCBI ptt file) compare
BT1153 -3.5 -4.7 phosphoserine aminotransferase (NCBI ptt file) compare
BT3936 -3.4 -3.3 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) compare
BT0891 -3.4 -3.3 dihydroorotate dehydrogenase electron transfer subunit (NCBI ptt file) compare
BT3761 -3.4 -4.0 N-succinylglutamate synthase (from data) compare
BT3759 -3.4 -8.4 N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) compare
BT3718 -3.4 -9.7 gamma-glutamyl phosphate reductase (NCBI ptt file) compare
BT2403 -3.4 -9.2 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) compare
BT3760 -3.3 -5.9 arginosuccinate synthetase (EC 6.3.4.5) (from data) compare
BT0528 -3.3 -2.3 phosphoribosylanthranilate isomerase (EC 5.3.1.24) (from data) compare
BT1374 -3.3 -3.9 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) compare
BT1857 -3.3 -7.8 3-isopropylmalate dehydrogenase (NCBI ptt file) compare
BT2837 -3.3 -13.4 2-oxoglutarate synthase subunit korB (NCBI ptt file) compare
BT0200 -3.2 -2.2 ATP phosphoribosyltransferase (NCBI ptt file) compare
BT2402 -3.2 -11.4 homoserine phosphotransferase HomK (from data) compare
BT2836 -3.2 -16.0 2-oxoglutarate synthase subunit korA (NCBI ptt file) compare
BT3717 -3.1 -4.7 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) compare
BT3549 -3.0 -7.0 N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data) compare
BT0203 -3.0 -2.1 histidine biosynthesis bifunctional protein hisB (NCBI ptt file) compare
BT2074 -3.0 -9.3 ketol-acid reductoisomerase (NCBI ptt file) compare
BT1754 -3.0 -5.7 two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) compare
BT0202 -2.9 -4.0 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
BT3253 -2.9 -2.8 phosphoribosylamine--glycine ligase (NCBI ptt file) compare
BT1747 -2.9 -5.9 pyruvate-flavodoxin oxidoreductase (NCBI ptt file) compare
BT1758 -2.9 -2.8 fructose transporter (from data) compare
BT1379 -2.9 -4.4 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
BT2415 -2.9 -11.5 aspartate aminotransferase (NCBI ptt file) compare
BT3164 -2.9 -8.5 quinolinate synthetase A (NCBI ptt file) compare
BT1152 -2.8 -3.3 D-3-phosphoglycerate dehydrogenase (NCBI ptt file) compare
BT3758 -2.8 -3.8 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) compare
BT1861 -2.7 -7.6 2-isopropylmalate synthase (EC 2.3.3.13) (from data) compare
BT2078 -2.7 -12.1 dihydroxy-acid dehydratase (NCBI ptt file) compare
BT0530 -2.7 -3.6 anthranilate phosphoribosyltransferase (EC 2.4.2.18) (from data) compare
BT1607 -2.6 -4.6 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
BT1858 -2.6 -7.7 (R)-citramalate synthase (EC 2.3.1.182) (from data) compare
BT4249 -2.5 -1.7 hypothetical protein (NCBI ptt file) compare
BT0585 -2.5 -1.7 conserved hypothetical protein (NCBI ptt file) compare
BT4027 -2.5 -2.4 hypothetical protein (NCBI ptt file) compare
BT2077 -2.5 -7.6 acetolactate synthase large subunit (NCBI ptt file) compare
BT1970 -2.5 -8.9 glutamate dehydrogenase (NCBI ptt file) compare
BT1844 -2.5 -4.7 transcriptional regulator, putative iron uptake regulation protein (NCBI ptt file) compare
BT0201 -2.5 -2.4 histidinol dehydrogenase (NCBI ptt file) compare
BT1378 -2.5 -1.7 imidazole glycerol phosphate synthase subunit hisF (NCBI ptt file) compare
BT4649 -2.4 -1.7 hypothetical protein (NCBI ptt file) compare
BT4211 -2.4 -2.4 putative phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) compare
BT2449 -2.4 -2.3 hypothetical protein (NCBI ptt file) compare
BT1860 -2.3 -4.9 3-isopropylmalate dehydratase large subunit (NCBI ptt file) compare
BT0527 -2.3 -4.4 tryptophan synthase alpha chain (NCBI ptt file) compare
BT0529 -2.3 -2.2 indole-3-glycerol phosphate synthase (NCBI ptt file) compare
BT3184 -2.3 -13.2 L-aspartate oxidase (NCBI ptt file) compare
BT3935 -2.2 -4.7 aminotransferase (NCBI ptt file) compare
BT3762 -2.2 -4.6 arginine repressor, transcriptional regulator of arginine metabolism (NCBI ptt file) compare
BT2076 -2.2 -8.6 acetohydroxybutanoate synthase regulatory subunit (EC 2.2.1.6) (from data) compare
BT2129 -2.2 -5.8 aspartate--ammonia ligase (NCBI ptt file) compare
BT0533 -2.2 -2.5 tryptophan synthase beta chain (NCBI ptt file) compare
BT3730 -2.1 -1.9 putative regulatory protein (NCBI ptt file) compare
BT4571 -2.1 -2.0 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT4206 -2.0 -1.7 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (NCBI ptt file) compare
BT0532 -2.0 -4.3 anthranilate synthase component I (NCBI ptt file) compare
BT1859 -2.0 -3.9 3-isopropylmalate dehydratase small subunit (NCBI ptt file) compare
BT1733 -2.0 -4.0 putative phosphoribosylformylglycinamidine synthase (NCBI ptt file) compare
BT1746 -2.0 -1.7 conserved hypothetical protein (NCBI ptt file) compare
BT0738 -2.0 -3.9 serine hydroxymethyltransferase (NCBI ptt file) compare
BT0777 -1.9 -2.5 hypothetical protein (NCBI ptt file) compare
BT4469 -1.9 -3.1 conserved hypothetical protein (NCBI ptt file) compare
BT3839 -1.9 -1.8 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT1759 -1.9 -3.3 levanase precursor (2,6-beta-D-fructofuranosidase) (NCBI ptt file) compare
BT0015 -1.8 -2.7 rteB, two-component system response regulator (NCBI ptt file) compare
BT1476 -1.8 -4.2 aspartate aminotransferase (NCBI ptt file) compare
BT1375 -1.8 -7.3 aspartokinase (NCBI ptt file) compare
BT4003 -1.8 -3.7 stationary-phase survival protein SurE (NCBI ptt file) compare
BT3320 -1.7 -5.4 dihydrodipicolinate reductase (NCBI ptt file) compare
BT0323 -1.7 -2.8 hypothetical protein (NCBI ptt file) compare
BT0321 -1.7 -2.5 cytidine/deoxycytidylate deaminase (NCBI ptt file) compare
BT1125 -1.7 -2.3 hypothetical protein (NCBI ptt file) compare
BT3727 -1.7 -5.0 hypothetical protein (NCBI ptt file) compare
BT3981 -1.7 -3.2 hypothetical protein (NCBI ptt file) compare
BT3757 -1.7 -5.8 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) compare
BT1137 -1.6 -1.4 hypothetical protein (NCBI ptt file) compare
BT0220 -1.6 -1.6 hypothetical protein (NCBI ptt file) compare
BT4562 -1.6 -1.5 hypothetical protein (NCBI ptt file) compare
BT1667 -1.6 -1.0 hypothetical protein (NCBI ptt file) compare
BT0912 -1.5 -1.4 DNA-binding protein HU (NCBI ptt file) compare
BT3481 -1.5 -1.6 putative glutaminase A (NCBI ptt file) compare
BT2003 -1.5 -1.7 putative membrane peptidase (NCBI ptt file) compare
BT1127 -1.5 -1.5 mobilization protein BmgB (NCBI ptt file) compare
BT1641 -1.5 -1.7 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT1713 -1.4 -2.5 putative acylneuraminate cytidylyltransferase (NCBI ptt file) compare
BT0937 -1.4 -2.1 hypothetical protein (NCBI ptt file) compare
BT4265 -1.4 -1.9 GMP synthase (glutamine-hydrolyzing) (NCBI ptt file) compare
BT1299 -1.4 -2.5 V-type ATP synthase subunit A (NCBI ptt file) compare
BT3845 -1.4 -2.2 inosine-5'-monophosphate dehydrogenase (NCBI ptt file) compare
BT1220 -1.4 -1.3 6-phosphogluconolactonase (NCBI ptt file) compare
BT1564 -1.4 -1.3 conserved hypothetical protein (NCBI ptt file) compare
BT0098 -1.4 -1.8 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1395 -1.4 -2.7 conserved hypothetical protein (NCBI ptt file) compare
BT1567 -1.4 -2.2 conserved hypothetical protein (NCBI ptt file) compare
BT0652 -1.4 -1.3 putative thiamine-phosphate pyrophosphorylase (NCBI ptt file) compare
BT1298 -1.4 -3.0 V-type ATP synthase subunit B (NCBI ptt file) compare
BT4753 -1.4 -1.4 hypothetical protein (NCBI ptt file) compare
BT0817 -1.3 -2.1 lipoprotein, function unknown (NCBI ptt file) compare
BT0501 -1.3 -1.8 hypothetical protein (NCBI ptt file) compare
BT0214 -1.3 -2.5 hypothetical protein (NCBI ptt file) compare
BT0178 -1.3 -2.0 hypothetical protein (NCBI ptt file) compare
BT1534 -1.3 -1.5 hypothetical protein (NCBI ptt file) compare
BT1329 -1.3 -2.3 putative thiol peroxidase (NCBI ptt file) compare
BT1804 -1.3 -2.3 electron transfer flavoprotein beta-subunit (NCBI ptt file) compare
BT3197 -1.3 -0.8 hypothetical protein (NCBI ptt file) compare
BT1608 -1.3 -5.1 capsule biosynthesis protein capA (NCBI ptt file) compare
BT2299 -1.3 -1.5 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0593 -1.3 -1.9 conserved hypothetical protein (NCBI ptt file) compare
p5482_02 -1.3 -4.9 hypothetical protein (NCBI) compare
BT4382 -1.3 -3.5 hypothetical protein (NCBI ptt file) compare
BT4733 -1.3 -1.6 conserved hypothetical protein (NCBI ptt file) compare
BT0647 -1.3 -2.0 thiamine phosphate pyrophosphorylase (NCBI ptt file) compare
BT4699 -1.3 -3.0 putative hydrolase, haloacid dehalogenase-like hydrolase (NCBI ptt file) compare
BT2688 -1.3 -4.1 outer membrane efflux protein (NCBI ptt file) compare
BT1206 -1.3 -2.0 conserved hypothetical protein (NCBI ptt file) compare
BT2280 -1.3 -1.7 hypothetical protein (NCBI ptt file) compare
BT3193 -1.3 -7.0 putative coenzyme A transferase (NCBI ptt file) compare
BT2566 -1.2 -3.4 HIT family protein (NCBI ptt file) compare
BT0429 -1.2 -1.6 indolepyruvate oxidoreductase subunit iorB (NCBI ptt file) compare
BT1221 -1.2 -2.3 glucose-6-phosphate 1-dehydrogenase (NCBI ptt file) compare
BT1138 -1.2 -2.6 transposase (NCBI ptt file) compare
BT4569 -1.2 -2.8 hypothetical protein (NCBI ptt file) compare
BT1583 -1.2 -1.6 putative protein disulfide isomerase (NCBI ptt file) compare
BT1976 -1.2 -1.2 hypothetical protein (NCBI ptt file) compare
BT0498 -1.2 -1.6 hypothetical protein (NCBI ptt file) compare
BT0473 -1.2 -2.3 putative glycosyltransferase (NCBI ptt file) compare
BT3194 -1.2 -3.9 hypothetical protein (NCBI ptt file) compare
BT1104 -1.2 -1.1 small heat shock protein (NCBI ptt file) compare
BT0147 -1.2 -3.9 hypothetical protein (NCBI ptt file) compare
BT1336 -1.2 -2.5 putative translation initiation inhibitor (NCBI ptt file) compare
BT2490 -1.2 -1.5 hypothetical protein (NCBI ptt file) compare
BT0731 -1.2 -1.3 hypothetical protein (NCBI ptt file) compare
BT2057 -1.2 -3.0 hypothetical protein (NCBI ptt file) compare
BT1671 -1.1 -3.0 endonuclease III (NCBI ptt file) compare
BT0767 -1.1 -2.7 putative para-aminobenzoate synthase component I (NCBI ptt file) compare
BT1187 -1.1 -2.8 transcriptional regulator (NCBI ptt file) compare
BT0638 -1.1 -3.9 putative methionine aminopeptidase A (NCBI ptt file) compare
BT3260 -1.1 -1.9 DNA polymerase I (NCBI ptt file) compare
BT1561 -1.1 -0.9 hypothetical protein (NCBI ptt file) compare
BT2853 -1.1 -1.6 hypothetical protein (NCBI ptt file) compare
BT4529 -1.1 -2.3 hypothetical protein (NCBI ptt file) compare
BT0771 -1.1 -4.2 1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) (NCBI ptt file) compare
BT0746 -1.1 -2.5 putative zinc protease (NCBI ptt file) compare
BT3022 -1.1 -1.6 hypothetical protein (NCBI ptt file) compare
BT1451 -1.1 -1.8 hypothetical protein (NCBI ptt file) compare
BT1363 -1.1 -1.2 DNA Pol III Epsilon Chain (NCBI ptt file) compare
BT0033 -1.1 -1.7 hypothetical protein (NCBI ptt file) compare
BT0397 -1.1 -1.1 conserved hypothetical protein (NCBI ptt file) compare
BT1526 -1.1 -3.1 myo-inositol-1-phosphate synthase (NCBI ptt file) compare
BT1557 -1.1 -1.2 hypothetical protein (NCBI ptt file) compare
BT1945 -1.1 -2.3 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1103 -1.1 -1.7 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT3911 -1.1 -1.9 malate dehydrogenase (NCBI ptt file) compare
BT0617 -1.0 -0.7 Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfB (NCBI ptt file) compare
BT4451 -1.0 -2.3 putative MTA/SAH nucleosidase (NCBI ptt file) compare
BT2045 -1.0 -1.2 hypothetical protein (NCBI ptt file) compare
BT0549 -1.0 -1.6 putative thioredoxin (NCBI ptt file) compare
BT2031 -1.0 -2.5 hypothetical protein (NCBI ptt file) compare
BT0151 -1.0 -1.0 hypothetical protein (NCBI ptt file) compare
BT0900 -1.0 -1.4 putative tetratricopeptide repeat family protein (NCBI ptt file) compare
BT0411 -1.0 -2.2 CysQ, sulfite synthesis pathway protein (NCBI ptt file) compare
BT0314 -1.0 -2.4 ribosomal protein L11 methyltransferase (NCBI ptt file) compare
BT2080 -1.0 -3.2 L-cysteine desulfidase cdsB (from data) compare
BT1524 -1.0 -1.6 hypothetical protein (NCBI ptt file) compare
BT0226 -1.0 -2.7 hypothetical protein (NCBI ptt file) compare
BT2169 -1.0 -3.1 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT3394 -1.0 -3.1 putative arginine decarboxylase (NCBI ptt file) compare
BT4310 -1.0 -6.3 NADPH-dependent glutamate synthase small chain (NCBI ptt file) compare
BT4063 -1.0 -1.7 NADH dehydrogenase I, chain I (NCBI ptt file) compare
BT2208 -1.0 -2.7 hypothetical protein (NCBI ptt file) compare
BT3716 -1.0 -2.1 conserved hypothetical protein (NCBI ptt file) compare
BT4064 -1.0 -3.1 NADH dehydrogenase I, chain H (NCBI ptt file) compare
BT1154 -1.0 -1.8 ATP-independent RNA helicase (NCBI ptt file) compare
BT4141 -1.0 -2.7 hypothetical protein (NCBI ptt file) compare
BT0677 -1.0 -1.4 thioredoxin (TRX) (NCBI ptt file) compare
BT1258 -1.0 -1.9 putative acetyltransferase (NCBI ptt file) compare
BT3462 -1.0 -2.7 TPR domain protein (NCBI ptt file) compare
BT1004 -1.0 -3.1 conserved hypothetical protein (NCBI ptt file) compare
BT1575 -0.9 -1.9 putative dehydrogenase (NCBI ptt file) compare
BT2612 -0.9 -2.4 hypothetical protein (NCBI ptt file) compare
BT0961 -0.9 -1.7 conserved hypothetical protein (NCBI ptt file) compare
BT1313 -0.9 -1.7 muconate cycloisomerase (NCBI ptt file) compare
BT4322 -0.9 -1.7 conserved hypothetical protein, with a diacylglycerol kinase catalytic domain (NCBI ptt file) compare
BT0936 -0.9 -1.5 hypothetical protein (NCBI ptt file) compare
BT1361 -0.9 -3.9 DNA repair protein recN (Recombination protein N) (NCBI ptt file) compare
BT0844 -0.9 -0.9 hypothetical protein (NCBI ptt file) compare
BT2932 -0.9 -1.5 transcriptional regulator (NCBI ptt file) compare
BT1296 -0.9 -3.9 V-type ATP synthase subunit I (NCBI ptt file) compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Fructooligosaccharides (FOS) in Bacteroides thetaiotaomicron VPI-5482

For carbon source Fructooligosaccharides (FOS) across organisms