Experiment set11IT064 for Klebsiella michiganensis M5al

Compare to:

2'-Deoxycytidine 10 mM carbon source

200 most important genes:

  gene name fitness t score description  
BWI76_RS00805 -7.3 -4.8 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS21475 -7.1 -4.9 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS00990 -6.9 -4.8 ketol-acid reductoisomerase compare
BWI76_RS00855 -6.6 -4.5 argininosuccinate lyase compare
BWI76_RS23220 -6.5 -6.4 amino-acid N-acetyltransferase compare
BWI76_RS19610 -6.5 -4.5 Cytidine deaminase (EC 3.5.4.5) (from data) compare
BWI76_RS07070 -6.3 -4.4 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS01655 -6.3 -7.5 homoserine O-succinyltransferase compare
BWI76_RS04160 -6.2 -5.8 phosphoserine phosphatase compare
BWI76_RS20350 -5.9 -5.8 amidophosphoribosyltransferase compare
BWI76_RS25280 -5.8 -2.0 RNase adaptor protein RapZ compare
BWI76_RS04670 -5.8 -8.8 3-isopropylmalate dehydratase large subunit compare
BWI76_RS21465 -5.7 -6.0 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS00850 -5.7 -9.2 acetylglutamate kinase compare
BWI76_RS04255 -5.5 -8.5 threonine synthase compare
BWI76_RS04680 -5.5 -12.3 2-isopropylmalate synthase compare
BWI76_RS02815 -5.4 -3.2 fructose-bisphosphatase class I compare
BWI76_RS04645 -5.4 -6.4 3-dehydroquinase compare
BWI76_RS09760 -5.4 -6.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS04130 -5.3 -7.6 2-deoxyribose-5-phosphate aldolase compare
BWI76_RS18930 -5.3 -4.7 histidinol-phosphate transaminase compare
BWI76_RS21265 -5.2 -13.0 phosphoribosylformylglycinamidine synthase compare
BWI76_RS20895 -5.2 -5.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS11840 -5.1 -2.4 tryptophan synthase subunit alpha compare
BWI76_RS04470 -5.1 -9.7 carbamoyl phosphate synthase large subunit compare
BWI76_RS04250 -5.0 -8.4 homoserine kinase compare
BWI76_RS00975 -5.0 -8.0 dihydroxy-acid dehydratase compare
BWI76_RS01210 -5.0 -3.7 tyrosine recombinase XerC compare
BWI76_RS18940 -5.0 -4.2 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS00835 -5.0 -11.9 phosphoenolpyruvate carboxylase compare
BWI76_RS01615 -4.9 -10.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS04675 -4.9 -4.8 3-isopropylmalate dehydrogenase compare
BWI76_RS20965 -4.9 -3.6 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS26085 -4.9 -2.8 3-dehydroquinate synthase compare
BWI76_RS23365 -4.8 -5.4 LysR family transcriptional regulator compare
BWI76_RS09645 -4.8 -1.6 thioredoxin-disulfide reductase compare
BWI76_RS18935 -4.8 -5.2 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS04665 -4.8 -18.3 3-isopropylmalate dehydratase small subunit compare
BWI76_RS04685 -4.8 -11.5 putative leucine operon leader peptide compare
BWI76_RS11850 -4.7 -7.8 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS23920 -4.6 -4.6 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS09755 -4.6 -6.6 phosphoserine transaminase compare
BWI76_RS04245 -4.5 -13.8 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS01610 -4.2 -4.5 phosphoribosylamine--glycine ligase compare
BWI76_RS18925 -4.1 -6.5 histidinol dehydrogenase compare
BWI76_RS08385 -4.0 -4.3 citrate (Si)-synthase compare
BWI76_RS04135 -4.0 -6.9 thymidine phosphorylase compare
BWI76_RS26175 -4.0 -5.3 DeoR/GlpR family transcriptional regulator compare
BWI76_RS18950 -4.0 -6.3 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS06185 -4.0 -7.8 shikimate kinase II compare
BWI76_RS11855 -3.9 -4.6 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS11845 -3.9 -2.2 tryptophan synthase subunit beta compare
BWI76_RS04465 -3.9 -5.9 carbamoyl-phosphate synthase small subunit compare
BWI76_RS00785 -3.9 -6.4 cystathionine gamma-synthase compare
BWI76_RS04240 -3.9 -1.6 thr operon leader peptide compare
BWI76_RS00980 -3.9 -8.9 PLP-dependent threonine dehydratase compare
BWI76_RS00845 -3.7 -6.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS16895 -3.7 -1.7 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS18920 -3.7 -3.5 ATP phosphoribosyltransferase compare
BWI76_RS09660 -3.6 -2.5 DNA translocase FtsK compare
BWI76_RS05840 -3.6 -6.2 glutamate 5-kinase compare
BWI76_RS20355 -3.5 -2.6 colicin V production protein compare
BWI76_RS25115 -3.5 -4.2 argininosuccinate synthase compare
BWI76_RS03080 -3.4 -3.6 (Fe-S)-cluster assembly protein compare
BWI76_RS24285 -3.4 -5.2 cystathionine beta-lyase compare
BWI76_RS03010 -3.4 -6.7 ornithine carbamoyltransferase compare
BWI76_RS07065 -3.3 -4.2 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS20435 -3.1 -1.5 chorismate synthase compare
BWI76_RS23360 -3.1 -2.4 diaminopimelate decarboxylase compare
BWI76_RS04510 -3.1 -2.9 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS22765 -3.0 -10.1 sulfite reductase subunit alpha compare
BWI76_RS24900 -3.0 -2.6 DeoR family transcriptional regulator compare
BWI76_RS00965 -3.0 -1.4 acetolactate synthase 2 small subunit compare
BWI76_RS05835 -2.9 -3.1 gamma-glutamyl-phosphate reductase compare
BWI76_RS05015 -2.8 -2.5 transcriptional regulator compare
BWI76_RS12090 -2.8 -1.9 HNH endonuclease compare
BWI76_RS20995 -2.7 -4.1 RNA degradosome polyphosphate kinase compare
BWI76_RS27475 -2.7 -9.5 regulatory protein GntR family protein compare
BWI76_RS18955 -2.7 -3.2 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS22760 -2.7 -6.4 sulfite reductase subunit beta compare
BWI76_RS11860 -2.6 -4.3 anthranilate synthase component I compare
BWI76_RS22755 -2.6 -5.0 phosphoadenosine phosphosulfate reductase compare
BWI76_RS00985 -2.6 -4.4 transcriptional regulator IlvY compare
BWI76_RS23240 -2.6 -4.5 exonuclease V subunit gamma compare
BWI76_RS06680 -2.5 -1.4 hypothetical protein compare
BWI76_RS16360 -2.5 -1.8 electron transport complex subunit RsxB compare
BWI76_RS21140 -2.4 -3.2 molecular chaperone HscA compare
BWI76_RS01185 -2.4 -1.7 adenylate cyclase compare
BWI76_RS23480 -2.4 -10.9 EAL domain-containing protein compare
BWI76_RS05680 -2.4 -3.4 LacI family transcriptional regulator compare
BWI76_RS20130 -2.3 -4.3 NADH-quinone oxidoreductase subunit N compare
BWI76_RS15825 -2.3 -3.2 hypothetical protein compare
BWI76_RS20190 -2.2 -4.3 NADH-quinone oxidoreductase subunit A compare
BWI76_RS08405 -2.2 -2.8 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS20170 -2.2 -4.6 NADH-quinone oxidoreductase subunit F compare
BWI76_RS13785 -2.2 -2.3 ABC transporter permease compare
BWI76_RS22240 -2.2 -7.2 transcriptional regulator compare
BWI76_RS20380 -2.1 -1.4 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS04140 -2.1 -2.8 phosphopentomutase compare
BWI76_RS14390 -2.1 -2.2 hypothetical protein compare
BWI76_RS05450 -2.0 -1.8 ribonuclease HI compare
BWI76_RS13685 -1.9 -2.1 IclR family transcriptional regulator compare
BWI76_RS23230 -1.9 -3.3 exodeoxyribonuclease V subunit beta compare
BWI76_RS20145 -1.9 -1.8 NADH-quinone oxidoreductase subunit K compare
BWI76_RS03665 -1.8 -1.8 ABC transporter ATP-binding protein compare
BWI76_RS21370 -1.8 -1.9 ATP-dependent RNA helicase SrmB compare
BWI76_RS02735 -1.8 -3.6 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS02530 -1.8 -1.9 tRNA dimethylallyltransferase compare
BWI76_RS04705 -1.8 -4.6 DNA-binding transcriptional regulator FruR compare
BWI76_RS20180 -1.8 -5.6 NADH-quinone oxidoreductase subunit C/D compare
BWI76_RS02095 -1.7 -7.2 acetyl-coenzyme A synthetase compare
BWI76_RS21990 -1.7 -5.1 ATPase AAA compare
BWI76_RS10805 -1.7 -2.7 hypothetical protein compare
BWI76_RS05120 -1.7 -5.0 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS16000 -1.7 -1.3 multidrug transporter subunit MdtI compare
BWI76_RS26570 -1.7 -2.4 anion permease compare
BWI76_RS21070 -1.6 -2.1 outer membrane protein assembly factor BamB compare
BWI76_RS20140 -1.6 -4.8 NADH-quinone oxidoreductase subunit L compare
BWI76_RS22690 -1.6 -2.9 adenylyl-sulfate kinase compare
BWI76_RS11235 -1.6 -1.2 hypothetical protein compare
BWI76_RS01070 -1.6 -4.0 thiol reductase thioredoxin compare
BWI76_RS19710 -1.6 -2.1 NupC/NupG family nucleoside CNT transporter compare
BWI76_RS19600 -1.6 -2.6 hypothetical protein compare
BWI76_RS03415 -1.6 -3.7 LacI family transcriptional regulator compare
BWI76_RS06525 -1.5 -3.0 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS24850 -1.5 -5.9 DeoR family transcriptional regulator compare
BWI76_RS21985 -1.5 -5.9 acetaldehyde dehydrogenase (EC 1.2.1.3) (from data) compare
BWI76_RS20135 -1.5 -3.9 NADH-quinone oxidoreductase subunit M compare
BWI76_RS03880 -1.5 -2.0 homoprotocatechuate degradation operon regulator, HpaR compare
BWI76_RS20155 -1.5 -1.5 NADH-quinone oxidoreductase subunit I compare
BWI76_RS07120 -1.5 -5.7 LacI family transcriptional regulator compare
BWI76_RS19330 -1.5 -1.2 HAD family hydrolase compare
BWI76_RS19850 -1.5 -2.2 tRNA-Pro compare
BWI76_RS20270 -1.5 -3.9 hypothetical protein compare
BWI76_RS11430 -1.5 -0.9 lipoprotein compare
BWI76_RS25960 -1.4 -3.9 NUDIX hydrolase compare
BWI76_RS07675 -1.4 -3.6 DeoR family transcriptional regulator compare
BWI76_RS05200 -1.4 -2.7 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS15015 -1.4 -1.3 DUF2132 domain-containing protein compare
BWI76_RS26095 -1.4 -1.0 shikimate kinase compare
BWI76_RS01940 -1.4 -2.7 hypothetical protein compare
BWI76_RS20650 -1.4 -1.9 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS16140 -1.4 -2.5 3-oxoadipate CoA-transferase compare
BWI76_RS07985 -1.4 -1.0 fluoride ion transporter CrcB compare
BWI76_RS27440 -1.3 -2.4 DNA helicase RecG compare
BWI76_RS11255 -1.3 -0.9 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS08395 -1.3 -1.5 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS26405 -1.3 -1.0 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS16275 -1.3 -1.9 fumarate hydratase FumA compare
BWI76_RS04655 -1.3 -1.6 shikimate dehydrogenase compare
BWI76_RS22695 -1.3 -2.5 sulfate adenylyltransferase compare
BWI76_RS02445 -1.3 -2.3 fumarate reductase subunit C compare
BWI76_RS23520 -1.3 -1.3 hypothetical protein compare
BWI76_RS02610 -1.3 -3.5 transcriptional regulator compare
BWI76_RS17370 -1.3 -1.9 nitrate transporter NasD compare
BWI76_RS15035 -1.3 -1.6 metal ABC transporter permease compare
BWI76_RS01125 -1.3 -4.1 4-alpha-L-fucosyltransferase compare
BWI76_RS09970 -1.3 -2.7 porin OmpA compare
BWI76_RS09110 -1.3 -2.4 glutathione ABC transporter permease GsiD compare
BWI76_RS15835 -1.2 -0.8 hypothetical protein compare
BWI76_RS15830 -1.2 -2.2 hypothetical protein compare
BWI76_RS16235 -1.2 -2.1 membrane protein compare
BWI76_RS24605 -1.2 -6.3 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS12390 -1.2 -2.3 antibiotic biosynthesis monooxygenase compare
BWI76_RS24945 -1.2 -0.9 glutamine amidotransferase compare
BWI76_RS23830 -1.2 -4.3 hypothetical protein compare
BWI76_RS26805 -1.2 -2.1 cellulose biosynthesis protein BcsF compare
BWI76_RS14980 -1.2 -1.3 hypothetical protein compare
BWI76_RS01995 -1.2 -1.0 AraC family transcriptional regulator compare
BWI76_RS08425 -1.2 -3.6 succinyl-CoA ligase subunit beta compare
BWI76_RS01385 -1.2 -1.8 potassium transporter compare
BWI76_RS14835 -1.2 -0.7 hypothetical protein compare
BWI76_RS09635 -1.2 -1.4 amino acid ABC transporter ATP-binding protein compare
BWI76_RS25545 -1.1 -2.5 hypothetical protein compare
BWI76_RS25420 -1.1 -3.6 malate dehydrogenase compare
BWI76_RS11360 -1.1 -2.8 L-asparaginase compare
BWI76_RS13595 -1.1 -3.2 transcriptional regulator compare
BWI76_RS08430 -1.1 -3.0 succinate--CoA ligase subunit alpha compare
BWI76_RS26075 -1.1 -1.8 DNA adenine methylase compare
BWI76_RS09195 -1.1 -1.2 N-acetyltransferase compare
BWI76_RS01350 -1.1 -0.8 NAD(P)H-flavin reductase compare
BWI76_RS00180 -1.1 -1.4 F0F1 ATP synthase subunit epsilon compare
BWI76_RS01680 -1.1 -3.9 transcriptional regulator IclR compare
BWI76_RS08730 -1.1 -2.9 histidine utilization repressor compare
BWI76_RS06295 -1.1 -3.2 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
BWI76_RS00400 -1.1 -0.6 glutamine synthetase compare
BWI76_RS04530 -1.1 -1.8 peptidylprolyl isomerase SurA compare
BWI76_RS27170 -1.1 -4.4 MltR family transcriptional regulator compare
BWI76_RS26055 -1.1 -4.2 siroheme synthase compare
BWI76_RS17195 -1.1 -1.8 hypothetical protein compare
BWI76_RS18605 -1.1 -1.0 oxidoreductase molybdopterin-binding protein compare
BWI76_RS20165 -1.1 -3.3 NADH-quinone oxidoreductase subunit G compare
BWI76_RS15150 -1.1 -3.5 outer membrane efflux protein compare
BWI76_RS20440 -1.1 -1.8 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS03595 -1.1 -0.7 ethanolamine utilization protein EutM compare
BWI76_RS21310 -1.0 -0.8 DNA repair protein RecO compare
BWI76_RS15845 -1.0 -0.8 hypothetical protein compare
BWI76_RS11580 -1.0 -1.6 L-asparaginase 1 compare
BWI76_RS20565 -1.0 -1.5 hypothetical protein compare
BWI76_RS27075 -1.0 -3.6 IclR family transcriptional regulator compare


Specific Phenotypes

For 26 genes in this experiment

For carbon source 2'-Deoxycytidine in Klebsiella michiganensis M5al

For carbon source 2'-Deoxycytidine across organisms