Experiment set11IT063 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Isosafrole 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_0951 -4.2 -4.1 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_1544 -4.1 -4.0 SirA-like protein compare
Psyr_1556 -3.5 -3.3 hypothetical protein compare
Psyr_4340 -3.5 -9.4 phosphomethylpyrimidine kinase, putative compare
Psyr_3008 -3.4 -8.6 Undecaprenyl-diphosphatase compare
Psyr_1613 -3.3 -5.0 septum site-determining protein MinC compare
Psyr_4203 -2.9 -2.8 SsrA-binding protein compare
Psyr_4740 -2.9 -6.2 thiazole-phosphate synthase compare
Psyr_4686 -2.9 -6.1 8-amino-7-oxononanoate synthase compare
Psyr_4341 -2.9 -7.5 thiamine-phosphate diphosphorylase compare
Psyr_0454 -2.8 -5.3 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_3808 -2.7 -2.2 hypothetical protein compare
Psyr_4687 -2.5 -6.9 biotin synthase compare
Psyr_4683 -2.4 -4.7 dethiobiotin synthase compare
Psyr_1663 -2.4 -3.8 phosphoribosylanthranilate isomerase compare
Psyr_0849 -2.2 -9.7 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_0574 -2.2 -5.2 protease FtsH subunit HflK compare
Psyr_4091 -2.1 -4.5 8-oxo-dGTPase compare
Psyr_4991 -2.0 -3.2 hypothetical protein compare
Psyr_1748 -1.7 -5.4 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_0917 -1.7 -9.4 ABC-2 compare
Psyr_4581 -1.6 -3.3 anthranilate synthase, component II compare
Psyr_0918 -1.6 -9.6 ABC transporter compare
Psyr_4684 -1.5 -2.2 biotin synthesis protein BioC compare
Psyr_4580 -1.5 -2.4 anthranilate phosphoribosyltransferase compare
Psyr_1408 -1.5 -3.0 Holliday junction endonuclease RuvC compare
Psyr_5132 -1.5 -3.0 Glucose-inhibited division protein A subfamily compare
Psyr_0255 -1.5 -2.4 glutamate-cysteine ligase compare
Psyr_2641 -1.5 -2.8 hypothetical protein compare
Psyr_2071 -1.5 -2.0 outer membrane lipoprotein OprI compare
Psyr_1907 -1.5 -3.1 GTP cyclohydrolase I compare
Psyr_0487 -1.4 -2.6 glutathione synthase compare
Psyr_1751 -1.4 -4.1 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_2471 -1.4 -2.5 hydroxymethylglutaryl-CoA lyase compare
Psyr_0565 -1.4 -4.5 Protein of unknown function UPF0126 compare
Psyr_3954 -1.4 -4.4 GTP-binding protein LepA compare
Psyr_2854 -1.3 -3.7 conserved hypothetical protein compare
Psyr_4884 -1.3 -4.3 Rhodanese-like protein compare
Psyr_3208 -1.3 -2.4 NADH dehydrogenase subunit M compare
Psyr_1350 -1.3 -2.4 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_4860 -1.2 -1.7 Integrase, catalytic region compare
Psyr_0259 -1.2 -2.8 Osmolarity sensor protein envZ compare
Psyr_3806 -1.2 -4.4 hypothetical protein compare
Psyr_4627 -1.2 -1.9 dimethyladenosine transferase compare
Psyr_3179 -1.2 -2.1 DNA translocase FtsK compare
Psyr_0493 -1.2 -2.7 CheW-like protein compare
Psyr_2112 -1.2 -2.2 Protein with unknown function DUF469 compare
Psyr_0282 -1.2 -3.5 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2462 -1.1 -3.3 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_4089 -1.1 -4.4 PAS compare
Psyr_4155 -1.1 -1.8 Protein of unknown function DUF615 compare
Psyr_1140 -1.1 -2.8 Disulfide bond formation protein DsbB compare
Psyr_0281 -1.1 -3.0 ABC transporter compare
Psyr_3581 -1.1 -4.5 ribosomal large subunit pseudouridine synthase B compare
Psyr_4055 -1.1 -1.9 conserved domain protein compare
Psyr_4822 -1.0 -2.9 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_2980 -1.0 -2.5 UDP-glucose pyrophosphorylase compare
Psyr_2848 -1.0 -3.1 hypothetical protein compare
Psyr_0826 -1.0 -4.6 glucose-6-phosphate isomerase compare
Psyr_0475 -1.0 -1.8 Protein of unknown function YGGT compare
Psyr_1094 -1.0 -2.1 cold-shock DNA-binding protein family compare
Psyr_RNA61 -1.0 -2.1 tRNA-Gly compare
Psyr_0734 -0.9 -2.7 Protein of unknown function DUF159 compare
Psyr_0372 -0.9 -1.5 CDS compare
Psyr_4634 -0.9 -1.7 Polynucleotide adenylyltransferase:Metal-dependent phosphohydrolase, HD subdomain protein compare
Psyr_2137 -0.9 -2.1 molybdopterin molybdochelatase compare
Psyr_3934 -0.9 -1.9 Short-chain dehydrogenase/reductase SDR compare
Psyr_0034 -0.9 -1.0 tryptophan synthase, beta chain compare
Psyr_2714 -0.9 -4.0 putative transmembrane protein compare
Psyr_4804 -0.9 -2.5 conserved hypothetical protein compare
Psyr_4115 -0.9 -1.6 phosphoheptose isomerase compare
Psyr_5133 -0.9 -2.6 tRNA modification GTPase trmE compare
Psyr_3947 -0.9 -2.0 Methyltransferase, putative compare
Psyr_2612 -0.9 -2.1 syrP protein, putative compare
Psyr_3906 -0.9 -1.6 regulatory protein, DeoR compare
Psyr_4562 -0.9 -4.0 conserved domain protein compare
Psyr_4262 -0.8 -1.4 lipoprotein, putative compare
Psyr_1667 -0.8 -3.2 Colicin V production protein compare
Psyr_0383 -0.8 -1.5 Twin-arginine translocation protein TatB compare
Psyr_2160 -0.8 -1.8 cold-shock DNA-binding protein family compare
Psyr_0044 -0.8 -0.9 transferase hexapeptide repeat protein compare
Psyr_1410 -0.8 -2.6 Holliday junction DNA helicase RuvB compare
Psyr_0580 -0.8 -2.1 23S rRNA Gm-2251 2'-O-methyltransferase compare
Psyr_1931 -0.8 -3.8 hypothetical protein compare
Psyr_2285 -0.8 -1.5 Twin-arginine translocation pathway signal compare
Psyr_5065 -0.8 -4.5 ATP-dependent DNA helicase UvrD compare
Psyr_2060 -0.8 -2.7 Sec-independent protein translocase TatD compare
Psyr_2973 -0.8 -1.8 Glyoxalase I compare
Psyr_3728 -0.8 -3.1 hypothetical protein compare
Psyr_2561 -0.8 -2.1 hypothetical protein compare
Psyr_1460 -0.8 -3.0 hypothetical protein compare
Psyr_0215 -0.8 -5.1 Exodeoxyribonuclease III xth compare
Psyr_0041 -0.8 -1.2 Protein of unknown function DUF1161 compare
Psyr_5129 -0.8 -1.9 chromosome segregation DNA-binding protein compare
Psyr_4194 -0.8 -2.7 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_0579 -0.8 -5.2 RNAse R compare
Psyr_2312 -0.7 -1.2 Protein of unknown function DUF24 compare
Psyr_3840 -0.7 -2.7 conserved hypothetical protein compare
Psyr_2593 -0.7 -2.1 ABC transporter compare
Psyr_2855 -0.7 -1.7 methionine synthase (B12-independent) compare
Psyr_2807 -0.7 -1.5 NinB compare
Psyr_2899 -0.7 -3.2 conserved hypothetical protein compare
Psyr_3952 -0.7 -2.6 conserved hypothetical protein compare
Psyr_4062 -0.7 -2.2 Pyridoxamine 5'-phosphate oxidase-related protein compare
Psyr_0491 -0.7 -2.4 chemotaxis sensory transducer compare
Psyr_3807 -0.7 -3.0 hypothetical protein compare
Psyr_0464 -0.7 -1.6 hypothetical protein compare
Psyr_3425 -0.7 -1.5 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp compare
Psyr_3466 -0.7 -1.6 Flagellin, C-terminal:Flagellin, N-terminal compare
Psyr_2227 -0.7 -1.6 conserved hypothetical protein compare
Psyr_3282 -0.7 -2.8 transcriptional regulator, TetR family compare
Psyr_1268 -0.7 -3.5 extracellular solute-binding protein, family 3:SLT compare
Psyr_1872 -0.7 -2.2 conserved hypothetical protein compare
Psyr_1009 -0.7 -1.9 Peptidylprolyl isomerase, FKBP-type compare
Psyr_1747 -0.7 -2.2 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_2769 -0.7 -1.8 conserved hypothetical protein compare
Psyr_3766 -0.7 -3.5 hypothetical protein compare
Psyr_2520 -0.7 -1.4 SOS-response transcriptional repressor, LexA compare
Psyr_1924 -0.7 -2.4 hypothetical protein compare
Psyr_0053 -0.7 -1.9 conserved hypothetical protein compare
Psyr_3026 -0.7 -2.2 transcriptional regulator, TetR family compare
Psyr_4512 -0.7 -3.6 putative phage-related protein compare
Psyr_4622 -0.7 -2.3 Nucleotidyl transferase compare
Psyr_3287 -0.7 -1.3 DNA topoisomerase I compare
Psyr_3324 -0.7 -2.4 transcriptional regulator, TetR family compare
Psyr_2461 -0.7 -1.4 Uncharacterized conserved protein UCP030820 compare
Psyr_1588 -0.7 -2.0 Putative exonuclease, RdgC compare
Psyr_3293 -0.7 -1.2 UspA compare
Psyr_3620 -0.7 -1.3 hypothetical protein compare
Psyr_1864 -0.7 -2.2 spermidine synthase compare
Psyr_3199 -0.7 -1.6 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_2636 -0.7 -2.0 TspO/MBR-related protein compare
Psyr_0524 -0.7 -1.9 Lipopolysaccharide kinase compare
Psyr_2664 -0.7 -3.3 hypothetical protein compare
Psyr_2030 -0.7 -1.0 Calcium-binding EF-hand compare
Psyr_2739 -0.7 -2.0 ThiJ/PfpI compare
Psyr_0919 -0.6 -4.5 Chromosome segregation ATPase-like protein compare
Psyr_4566 -0.6 -4.1 Peptidase M23B compare
Psyr_3164 -0.6 -4.2 Protein of unknown function UPF0005 compare
Psyr_3258 -0.6 -2.0 conserved hypothetical protein compare
Psyr_2095 -0.6 -2.7 Conserved TM helix compare
Psyr_1371 -0.6 -3.3 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_1975 -0.6 -1.1 Integrase, catalytic region compare
Psyr_1373 -0.6 -1.4 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_1419 -0.6 -1.5 preQ(0) biosynthesis protein QueC compare
Psyr_2065 -0.6 -2.2 transcription elongation factor GreB compare
Psyr_1097 -0.6 -1.5 glycine cleavage system H protein compare
Psyr_4118 -0.6 -3.1 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal compare
Psyr_0394 -0.6 -2.3 Heat shock protein HslU compare
Psyr_4593 -0.6 -2.0 sigma factor domain protein compare
Psyr_1404 -0.6 -3.5 Ferritin and Dps compare
Psyr_0575 -0.6 -1.7 protease FtsH subunit HflC compare
Psyr_3315 -0.6 -1.3 conserved hypothetical protein compare
Psyr_0373 -0.6 -1.4 CDS compare
Psyr_3246 -0.6 -1.4 Ku compare
Psyr_0529 -0.6 -2.1 Glycosyl transferase, group 1 compare
Psyr_4609 -0.6 -4.3 anthranilate synthase, component I compare
Psyr_3796 -0.6 -1.8 transcriptional regulator, LysR family compare
Psyr_2826 -0.6 -1.7 hypothetical protein compare
Psyr_0927 -0.6 -1.8 hypothetical protein compare
Psyr_3305 -0.6 -1.8 Glycosyl transferase, group 1 compare
Psyr_0830 -0.6 -2.6 Poly(A) polymerase compare
Psyr_3377 -0.6 -1.5 transcriptional regulator, MarR family compare
Psyr_3616 -0.6 -3.8 Heat shock protein, Metallo peptidase, MEROPS family M48B compare
Psyr_1555 -0.6 -1.4 Cobyrinic acid a,c-diamide synthase compare
Psyr_1227 -0.6 -1.6 Queuosine biosynthesis protein compare
Psyr_2345 -0.6 -2.7 ea59 protein compare
Psyr_3291 -0.6 -2.8 hypothetical protein compare
Psyr_3107 -0.6 -1.5 conserved hypothetical protein compare
Psyr_3554 -0.6 -1.0 Carbon storage regulator compare
Psyr_0033 -0.6 -0.6 tryptophan synthase, alpha chain compare
Psyr_0792 -0.6 -1.6 conserved hypothetical protein compare
Psyr_1947 -0.6 -1.1 MbtH-like protein compare
Psyr_3088 -0.6 -2.0 Glycosyl transferase, group 1 compare
Psyr_1935 -0.6 -2.3 Protein of unknown function DUF796 compare
Psyr_0535 -0.6 -1.6 toluene tolerance protein, putative compare
Psyr_3000 -0.6 -0.8 methyltransferase, putative compare
Psyr_1678 -0.6 -0.7 Hypothetical protein compare
Psyr_3681 -0.6 -1.1 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
Psyr_0377 -0.6 -2.9 Periplasmic glucan biosynthesis protein, MdoG compare
Psyr_4995 -0.5 -1.7 RHS protein compare
Psyr_0153 -0.5 -1.6 conserved hypothetical protein compare
Psyr_4786 -0.5 -1.3 hypothetical protein compare
Psyr_4317 -0.5 -2.4 Probable taurine catabolism dioxygenase-like protein compare
Psyr_0174 -0.5 -3.0 Sodium:dicarboxylate symporter compare
Psyr_4362 -0.5 -1.1 Rare lipoprotein A compare
Psyr_0444 -0.5 -0.8 Malonate decarboxylase delta subunit compare
Psyr_0571 -0.5 -1.6 tRNA isopentenyltransferase compare
Psyr_3589 -0.5 -1.7 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_4754 -0.5 -1.2 16S rRNA m(2)G-966 methyltransferase compare
Psyr_4519 -0.5 -3.2 General substrate transporter:Major facilitator superfamily compare
Psyr_0941 -0.5 -2.6 Conserved hypothetical protein 92 compare
Psyr_0857 -0.5 -1.4 [SSU ribosomal protein S18P]-alanine acetyltransferase compare
Psyr_1245 -0.5 -2.7 23S rRNA m(2)A-2503 methyltransferase compare
Psyr_0923 -0.5 -2.4 hypothetical protein compare
Psyr_5135 -0.5 -1.1 Protein of unknown function DUF37 compare
Psyr_4093 -0.5 -1.9 glutamate N-acetyltransferase compare
Psyr_4989 -0.5 -1.6 hypothetical protein compare
Psyr_2847 -0.5 -1.3 hypothetical protein compare
Psyr_4584 -0.5 -2.9 Protein of unknown function DUF144 compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Isosafrole across organisms