Experiment set11IT049 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Quinine Hdrochloride 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_1544 -4.4 -3.1 SirA-like protein compare
Psyr_3008 -3.7 -8.8 Undecaprenyl-diphosphatase compare
Psyr_4340 -3.7 -9.6 phosphomethylpyrimidine kinase, putative compare
Psyr_4686 -3.5 -6.1 8-amino-7-oxononanoate synthase compare
Psyr_4740 -3.4 -6.0 thiazole-phosphate synthase compare
Psyr_1663 -3.3 -3.2 phosphoribosylanthranilate isomerase compare
Psyr_0951 -3.1 -4.5 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4991 -3.1 -3.6 hypothetical protein compare
Psyr_4683 -3.0 -5.0 dethiobiotin synthase compare
Psyr_4091 -2.8 -5.9 8-oxo-dGTPase compare
Psyr_4687 -2.8 -7.7 biotin synthase compare
Psyr_1613 -2.7 -5.3 septum site-determining protein MinC compare
Psyr_0255 -2.7 -3.1 glutamate-cysteine ligase compare
Psyr_4341 -2.6 -7.3 thiamine-phosphate diphosphorylase compare
Psyr_1556 -2.6 -3.5 hypothetical protein compare
Psyr_4203 -2.4 -2.8 SsrA-binding protein compare
Psyr_4580 -2.3 -3.1 anthranilate phosphoribosyltransferase compare
Psyr_0475 -2.3 -2.7 Protein of unknown function YGGT compare
Psyr_0918 -2.2 -11.3 ABC transporter compare
Psyr_1907 -2.2 -4.1 GTP cyclohydrolase I compare
Psyr_0849 -2.1 -10.0 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_4627 -2.1 -3.3 dimethyladenosine transferase compare
Psyr_0454 -2.1 -5.9 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_3152 -2.0 -1.6 hypothetical protein compare
Psyr_0917 -1.8 -9.7 ABC-2 compare
Psyr_1751 -1.8 -5.1 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_0575 -1.6 -3.6 protease FtsH subunit HflC compare
Psyr_4822 -1.6 -3.5 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_1930 -1.5 -3.5 hypothetical protein compare
Psyr_1097 -1.5 -2.1 glycine cleavage system H protein compare
Psyr_4684 -1.5 -2.6 biotin synthesis protein BioC compare
Psyr_1555 -1.5 -4.2 Cobyrinic acid a,c-diamide synthase compare
Psyr_1748 -1.5 -4.8 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_3287 -1.5 -2.3 DNA topoisomerase I compare
Psyr_3806 -1.5 -5.5 hypothetical protein compare
Psyr_0383 -1.4 -1.8 Twin-arginine translocation protein TatB compare
Psyr_0574 -1.4 -4.9 protease FtsH subunit HflK compare
Psyr_1373 -1.4 -2.7 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_3867 -1.4 -2.6 hypothetical protein compare
Psyr_4884 -1.4 -4.1 Rhodanese-like protein compare
Psyr_3104 -1.3 -3.2 phosphate ABC transporter membrane protein 2, PhoT family compare
Psyr_1688 -1.3 -3.0 Protein of unknown function DUF1315 compare
Psyr_0565 -1.3 -6.1 Protein of unknown function UPF0126 compare
Psyr_4136 -1.3 -2.7 BolA-like protein compare
Psyr_5133 -1.3 -3.7 tRNA modification GTPase trmE compare
Psyr_4362 -1.3 -3.2 Rare lipoprotein A compare
Psyr_3954 -1.3 -5.2 GTP-binding protein LepA compare
Psyr_2642 -1.3 -3.8 hypothetical protein compare
Psyr_0282 -1.2 -3.3 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0034 -1.2 -0.8 tryptophan synthase, beta chain compare
Psyr_2854 -1.2 -3.7 conserved hypothetical protein compare
Psyr_3581 -1.2 -5.0 ribosomal large subunit pseudouridine synthase B compare
Psyr_3906 -1.2 -2.1 regulatory protein, DeoR compare
Psyr_2067 -1.2 -2.5 ABC transporter compare
Psyr_1227 -1.2 -2.6 Queuosine biosynthesis protein compare
Psyr_1350 -1.1 -2.4 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_3007 -1.1 -1.7 Protein of unknown function DUF1294 compare
Psyr_2462 -1.1 -3.6 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_2641 -1.1 -2.1 hypothetical protein compare
Psyr_1992 -1.1 -2.0 Zinc-containing alcohol dehydrogenase superfamily compare
Psyr_1460 -1.1 -4.2 hypothetical protein compare
Psyr_3620 -1.1 -1.7 hypothetical protein compare
Psyr_3013 -1.1 -1.8 magnesium chelatase subunit ChlD compare
Psyr_0259 -1.1 -2.4 Osmolarity sensor protein envZ compare
Psyr_1410 -1.1 -3.3 Holliday junction DNA helicase RuvB compare
Psyr_0487 -1.1 -2.2 glutathione synthase compare
Psyr_2312 -1.0 -1.5 Protein of unknown function DUF24 compare
Psyr_2471 -1.0 -2.1 hydroxymethylglutaryl-CoA lyase compare
Psyr_0927 -1.0 -2.5 hypothetical protein compare
Psyr_4581 -1.0 -1.8 anthranilate synthase, component II compare
Psyr_0550 -1.0 -3.3 Protein of unknown function UPF0227 compare
Psyr_1408 -1.0 -2.1 Holliday junction endonuclease RuvC compare
Psyr_2221 -1.0 -2.0 sarcosine oxidase, gamma subunit compare
Psyr_0184 -1.0 -3.3 Protein of unknown function DUF484 compare
Psyr_5132 -1.0 -2.5 Glucose-inhibited division protein A subfamily compare
Psyr_0464 -1.0 -2.3 hypothetical protein compare
Psyr_4979 -1.0 -4.4 hypothetical protein compare
Psyr_3293 -1.0 -1.1 UspA compare
Psyr_2823 -0.9 -1.1 hypothetical protein compare
Psyr_0014 -0.9 -2.8 lipid A biosynthesis acyltransferase compare
Psyr_1419 -0.9 -2.1 preQ(0) biosynthesis protein QueC compare
Psyr_2433 -0.9 -2.7 conserved hypothetical protein compare
Psyr_3014 -0.9 -2.4 protoporphyrin IX magnesium-chelatase compare
Psyr_0579 -0.9 -6.5 RNAse R compare
Psyr_4015 -0.9 -1.9 conserved domain protein compare
Psyr_1749 -0.9 -4.1 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_4089 -0.9 -3.5 PAS compare
Psyr_2345 -0.8 -3.1 ea59 protein compare
Psyr_2770 -0.8 -4.4 tail fiber domain protein compare
Psyr_1505 -0.8 -1.9 Protein of unknown function DUF156 compare
Psyr_2348 -0.8 -2.1 hypothetical protein compare
Psyr_2264 -0.8 -1.2 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_2848 -0.8 -2.2 hypothetical protein compare
Psyr_1747 -0.8 -2.6 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_2769 -0.8 -2.4 conserved hypothetical protein compare
Psyr_2664 -0.8 -4.3 hypothetical protein compare
Psyr_4316 -0.8 -2.5 conserved hypothetical protein compare
Psyr_0202 -0.8 -5.2 transcriptional regulator, LysR family compare
Psyr_3807 -0.8 -3.6 hypothetical protein compare
Psyr_4019 -0.8 -2.0 H-NS family protein MvaT compare
Psyr_5130 -0.8 -4.1 chromosome segregation ATPase compare
Psyr_3090 -0.8 -2.0 hypothetical protein compare
Psyr_1919 -0.8 -3.6 hypothetical protein compare
Psyr_1903 -0.8 -1.9 conserved hypothetical protein compare
Psyr_4361 -0.8 -2.5 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 compare
Psyr_1371 -0.8 -4.2 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_0215 -0.8 -5.1 Exodeoxyribonuclease III xth compare
Psyr_2060 -0.8 -2.6 Sec-independent protein translocase TatD compare
Psyr_3840 -0.8 -2.2 conserved hypothetical protein compare
Psyr_1404 -0.8 -4.7 Ferritin and Dps compare
Psyr_4194 -0.8 -2.9 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_1667 -0.8 -3.4 Colicin V production protein compare
Psyr_3164 -0.8 -4.4 Protein of unknown function UPF0005 compare
Psyr_4609 -0.8 -5.6 anthranilate synthase, component I compare
Psyr_1121 -0.8 -1.8 6-phosphogluconolactonase compare
Psyr_0919 -0.8 -5.0 Chromosome segregation ATPase-like protein compare
Psyr_0281 -0.8 -2.3 ABC transporter compare
Psyr_4465 -0.8 -1.7 conserved domain protein compare
Psyr_0493 -0.8 -1.7 CheW-like protein compare
Psyr_RNA61 -0.7 -2.3 tRNA-Gly compare
Psyr_4285 -0.7 -1.9 Ferredoxin:[2Fe-2S]-binding protein compare
Psyr_4255 -0.7 -3.1 FKBP-type peptidyl-prolyl isomerase, N-terminal:Peptidylprolyl isomerase, FKBP-type compare
Psyr_2321 -0.7 -4.2 YD repeat protein compare
Psyr_1317 -0.7 -1.2 conserved hypothetical protein compare
Psyr_3341 -0.7 -2.2 hypothetical protein compare
Psyr_3084 -0.7 -2.6 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_0941 -0.7 -4.0 Conserved hypothetical protein 92 compare
Psyr_4920 -0.7 -1.6 conserved hypothetical bacteriophage protein compare
Psyr_1236 -0.7 -2.2 transcriptional regulator, BadM/Rrf2 family compare
Psyr_4989 -0.7 -2.3 hypothetical protein compare
Psyr_2347 -0.7 -1.1 hypothetical protein compare
Psyr_1935 -0.7 -3.1 Protein of unknown function DUF796 compare
Psyr_1832 -0.7 -2.1 Exonuclease compare
Psyr_3720 -0.7 -3.7 Filamentation induced by cAMP protein Fic compare
Psyr_4622 -0.7 -3.1 Nucleotidyl transferase compare
Psyr_1250 -0.7 -1.8 conserved hypothetical protein compare
Psyr_1190 -0.7 -2.4 type III transcriptional regulator HrpR compare
Psyr_1417 -0.7 -2.7 TPR repeat protein compare
Psyr_0724 -0.7 -2.1 conserved hypothetical protein compare
Psyr_1418 -0.7 -1.2 Radical SAM compare
Psyr_2065 -0.7 -3.1 transcription elongation factor GreB compare
Psyr_3728 -0.7 -2.7 hypothetical protein compare
Psyr_2182 -0.7 -2.6 hypothetical protein compare
Psyr_0535 -0.7 -2.1 toluene tolerance protein, putative compare
Psyr_4893 -0.7 -1.4 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_2346 -0.7 -2.5 conserved hypothetical protein compare
Psyr_5135 -0.7 -1.0 Protein of unknown function DUF37 compare
Psyr_0201 -0.7 -4.1 ATP-dependent DNA helicase RecG compare
Psyr_2428 -0.7 -1.9 GCN5-related N-acetyltransferase compare
Psyr_3199 -0.7 -1.7 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_2077 -0.7 -2.2 regulatory protein, LysR:LysR, substrate-binding protein compare
Psyr_0580 -0.7 -2.3 23S rRNA Gm-2251 2'-O-methyltransferase compare
Psyr_2155 -0.7 -2.1 Carbohydrate kinase, PfkB compare
Psyr_0920 -0.7 -5.6 Glycosyl transferase, group 1 compare
Psyr_4786 -0.7 -1.2 hypothetical protein compare
Psyr_2899 -0.7 -2.5 conserved hypothetical protein compare
Psyr_2114 -0.6 -2.6 two component transcriptional regulator, LuxR family compare
Psyr_0531 -0.6 -1.2 LmbE-like protein compare
Psyr_3127 -0.6 -2.3 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_1268 -0.6 -3.4 extracellular solute-binding protein, family 3:SLT compare
Psyr_3808 -0.6 -0.5 hypothetical protein compare
Psyr_3949 -0.6 -2.5 DNA replication and repair protein RecO compare
Psyr_2820 -0.6 -1.7 RecT protein compare
Psyr_2620 -0.6 -1.3 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_2601 -0.6 -3.7 regulatory protein, LuxR compare
Psyr_3568 -0.6 -3.0 Succinylglutamate desuccinylase/aspartoacylase compare
Psyr_0033 -0.6 -0.7 tryptophan synthase, alpha chain compare
Psyr_1864 -0.6 -1.9 spermidine synthase compare
Psyr_2804 -0.6 -1.8 hypothetical protein compare
Psyr_0664 -0.6 -2.9 ABC transporter compare
Psyr_1843 -0.6 -1.7 Protein of unknown function DUF1311 compare
Psyr_2842 -0.6 -3.2 hypothetical protein compare
Psyr_0529 -0.6 -2.7 Glycosyl transferase, group 1 compare
Psyr_2456 -0.6 -1.5 Short-chain dehydrogenase/reductase SDR compare
Psyr_0573 -0.6 -3.2 GTP-binding protein HflX compare
Psyr_3665 -0.6 -1.7 conserved hypothetical protein compare
Psyr_4460 -0.6 -1.0 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_3854 -0.6 -0.9 OmpA/MotB compare
Psyr_0490 -0.6 -2.5 CheW-like protein compare
Psyr_2039 -0.6 -1.4 Fimbrial protein compare
Psyr_4634 -0.6 -0.8 Polynucleotide adenylyltransferase:Metal-dependent phosphohydrolase, HD subdomain protein compare
Psyr_0041 -0.6 -1.5 Protein of unknown function DUF1161 compare
Psyr_2628 -0.6 -1.9 ABC transporter compare
Psyr_3089 -0.6 -4.6 Hemolysin-type calcium-binding region:hemolysin-type calcium binding related protein compare
Psyr_2629 -0.6 -3.3 von Willebrand factor, type A compare
Psyr_2275 -0.6 -1.5 glutamate synthase (NADPH) GltB3 subunit compare
Psyr_2528 -0.6 -1.6 Polysaccharide deacetylase compare
Psyr_0376 -0.6 -1.7 D-tyrosyl-tRNA(Tyr) deacylase compare
Psyr_0053 -0.6 -1.4 conserved hypothetical protein compare
Psyr_0928 -0.6 -3.6 hypothetical protein compare
Psyr_0826 -0.6 -2.9 glucose-6-phosphate isomerase compare
Psyr_3290 -0.6 -1.5 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_4009 -0.6 -3.3 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_2590 -0.6 -1.7 Periplasmic binding protein compare
Psyr_3952 -0.6 -2.0 conserved hypothetical protein compare
Psyr_2980 -0.6 -1.7 UDP-glucose pyrophosphorylase compare
Psyr_2855 -0.6 -1.9 methionine synthase (B12-independent) compare
Psyr_2378 -0.6 -2.0 transcriptional regulator, TetR family compare
Psyr_4464 -0.6 -0.8 lipoprotein, putative compare
Psyr_2636 -0.6 -1.5 TspO/MBR-related protein compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Quinine Hdrochloride across organisms