Experiment set11IT043 for Pseudomonas fluorescens SBW25-INTG

Compare to:

Sucrose (C) and Ammonium chloride (N); with MOPS

200 most detrimental genes:

  gene name fitness t score description  
PFLU_RS03555 +1.5 2.3 EscS/YscS/HrcS family type III secretion system export apparatus protein compare
PFLU_RS09535 +1.2 1.9 TIGR03750 family conjugal transfer protein compare
PFLU_RS13370 +1.1 3.1 DUF2790 domain-containing protein compare
PFLU_RS13945 +0.9 2.4 hypothetical protein compare
PFLU_RS07520 +0.9 1.7 hypothetical protein compare
PFLU_RS27420 +0.9 2.4 response regulator transcription factor compare
PFLU_RS02215 +0.9 1.7 hypothetical protein compare
PFLU_RS31425 +0.8 0.9 hypothetical protein compare
PFLU_RS28315 +0.8 1.2 response regulator compare
PFLU_RS04075 +0.8 1.0 hypothetical protein compare
PFLU_RS03995 +0.8 1.4 hypothetical protein compare
PFLU_RS18055 +0.8 1.4 hydrolase compare
PFLU_RS23220 +0.8 2.1 tRNA-Arg compare
PFLU_RS30900 +0.8 1.2 hypothetical protein compare
PFLU_RS12675 +0.8 3.3 DUF2946 domain-containing protein compare
PFLU_RS18515 +0.8 1.9 fluoride efflux transporter CrcB compare
PFLU_RS13365 +0.8 1.5 hypothetical protein compare
PFLU_RS31510 +0.8 2.0 transcriptional regulator compare
PFLU_RS08695 +0.8 3.1 DUF3077 domain-containing protein compare
PFLU_RS05890 +0.7 1.2 recombination regulator RecX compare
PFLU_RS09845 +0.7 2.8 biotin carboxyl carrier domain-containing protein compare
PFLU_RS08600 +0.7 2.1 glutaredoxin family protein compare
PFLU_RS26565 +0.7 1.1 rRNA maturation RNase YbeY compare
PFLU_RS21360 +0.7 0.9 MarR family transcriptional regulator compare
PFLU_RS25865 +0.7 2.5 YhbY family RNA-binding protein compare
PFLU_RS29360 +0.7 1.4 cytochrome c5 family protein compare
PFLU_RS23890 +0.7 2.2 pseudouridine synthase compare
PFLU_RS14300 +0.6 1.8 response regulator transcription factor compare
PFLU_RS04935 +0.6 2.3 cyclic pyranopterin monophosphate synthase MoaC compare
PFLU_RS31800 +0.6 1.2 hypothetical protein compare
PFLU_RS05965 +0.6 1.4 hypothetical protein compare
PFLU_RS10670 +0.6 2.8 hypothetical protein compare
PFLU_RS02130 +0.6 2.2 glycosyl transferase compare
PFLU_RS13665 +0.6 1.5 MarR family transcriptional regulator compare
PFLU_RS31830 +0.6 1.2 hypothetical protein compare
PFLU_RS31825 +0.6 2.5 hypothetical protein compare
PFLU_RS01960 +0.6 1.2 ATP-dependent protease ATPase subunit HslU compare
PFLU_RS25025 +0.6 1.1 hypothetical protein compare
PFLU_RS28285 +0.6 1.1 hypothetical protein compare
PFLU_RS06320 +0.6 1.2 OmpH family outer membrane protein compare
PFLU_RS04140 +0.6 1.9 response regulator transcription factor compare
PFLU_RS08525 +0.6 2.7 glutathione peroxidase compare
PFLU_RS04015 +0.6 1.2 1-phosphofructokinase compare
PFLU_RS26440 +0.6 1.6 acyl carrier protein compare
PFLU_RS02860 +0.6 1.4 urease subunit beta compare
PFLU_RS26490 +0.6 1.6 cation diffusion facilitator family transporter compare
PFLU_RS27805 +0.6 1.2 sarcosine oxidase subunit gamma family protein compare
PFLU_RS00850 +0.6 1.4 hypothetical protein compare
PFLU_RS14680 +0.6 1.9 cbb3-type cytochrome c oxidase subunit 3 compare
PFLU_RS04845 +0.6 2.9 hypothetical protein compare
PFLU_RS18705 +0.6 1.4 hypothetical protein compare
PFLU_RS05875 +0.6 1.9 lysozyme compare
PFLU_RS17375 +0.6 2.7 glutathione transferase compare
PFLU_RS13120 +0.6 1.3 hypothetical protein compare
PFLU_RS31630 +0.6 1.5 hypothetical protein compare
PFLU_RS11490 +0.6 1.7 ABC transporter ATP-binding protein compare
PFLU_RS31310 +0.6 1.7 phage tail protein compare
PFLU_RS12805 +0.6 1.9 RidA family protein compare
PFLU_RS25570 +0.6 2.0 OmpA family protein compare
PFLU_RS02455 +0.5 1.5 3',5'-cyclic-AMP phosphodiesterase compare
PFLU_RS16365 +0.5 1.9 hypothetical protein compare
PFLU_RS28265 +0.5 1.6 malonate decarboxylase subunit delta compare
PFLU_RS02825 +0.5 0.9 phosphate starvation-inducible protein PsiF compare
PFLU_RS23675 +0.5 1.3 hypothetical protein compare
PFLU_RS08760 +0.5 1.6 phosphonate C-P lyase system protein PhnG compare
PFLU_RS15420 +0.5 1.4 hypothetical protein compare
PFLU_RS30645 +0.5 1.3 type II toxin-antitoxin system HicA family toxin compare
PFLU_RS30505 +0.5 2.1 hypothetical protein compare
PFLU_RS17505 +0.5 1.0 hypothetical protein compare
PFLU_RS22470 +0.5 0.7 hypothetical protein compare
PFLU_RS16530 +0.5 2.9 hypothetical protein compare
PFLU_RS31620 +0.5 2.5 integrase compare
PFLU_RS13670 +0.5 1.8 (2Fe-2S)-binding protein compare
PFLU_RS09500 +0.5 1.0 hypothetical protein compare
PFLU_RS07910 +0.5 0.8 type 1 fimbrial protein compare
PFLU_RS23595 +0.5 3.8 LacI family DNA-binding transcriptional regulator compare
PFLU_RS08850 +0.5 2.3 pyruvate kinase compare
PFLU_RS29580 +0.5 1.5 ABC transporter ATP-binding protein compare
PFLU_RS18670 +0.5 0.9 NADH-quinone oxidoreductase subunit M compare
PFLU_RS31835 +0.5 0.7 hypothetical protein compare
PFLU_RS18640 +0.5 2.6 NADH-quinone oxidoreductase subunit NuoG compare
PFLU_RS31840 +0.5 1.2 hypothetical protein compare
PFLU_RS12205 +0.5 1.7 DNA binding protein compare
PFLU_RS13600 +0.5 2.4 sigma-70 family RNA polymerase sigma factor compare
PFLU_RS19740 +0.5 2.0 NAD-dependent succinate-semialdehyde dehydrogenase compare
PFLU_RS21950 +0.5 1.5 hypothetical protein compare
PFLU_RS02410 +0.5 1.5 multidrug efflux SMR transporter compare
PFLU_RS15785 +0.5 1.8 type II secretion system protein GspH compare
PFLU_RS14070 +0.5 2.5 NlpC/P60 family protein compare
PFLU_RS13845 +0.5 0.8 hypothetical protein compare
PFLU_RS14430 +0.5 0.9 arsenate reductase ArsC compare
PFLU_RS23260 +0.5 2.2 carbon storage regulator CsrA compare
PFLU_RS19645 +0.5 2.4 hypothetical protein compare
PFLU_RS26400 +0.5 1.1 HAD family hydrolase compare
PFLU_RS21240 +0.5 1.2 hypothetical protein compare
PFLU_RS29390 +0.5 1.9 YkgJ family cysteine cluster protein compare
PFLU_RS11770 +0.5 1.5 type 1 glutamine amidotransferase domain-containing protein compare
PFLU_RS01175 +0.5 2.5 ATP-binding cassette domain-containing protein compare
PFLU_RS12145 +0.5 0.7 nuclear transport factor 2 family protein compare
PFLU_RS19750 +0.5 2.0 FAD-binding oxidoreductase compare
PFLU_RS16300 +0.5 1.5 hypothetical protein compare
PFLU_RS01875 +0.5 0.7 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
PFLU_RS11380 +0.4 0.5 sarcosine oxidase subunit delta compare
PFLU_RS20210 +0.4 1.9 hypothetical protein compare
PFLU_RS22335 +0.4 3.0 cytochrome-c oxidase, cbb3-type subunit III compare
PFLU_RS04065 +0.4 2.6 ABC transporter permease compare
PFLU_RS11840 +0.4 1.3 RNA polymerase sigma factor compare
PFLU_RS12800 +0.4 0.9 amino acid ABC transporter ATP-binding protein compare
PFLU_RS23920 +0.4 0.9 septation protein A compare
PFLU_RS24340 +0.4 1.7 sigma-70 family RNA polymerase sigma factor compare
PFLU_RS15165 +0.4 1.1 RidA family protein compare
PFLU_RS11475 +0.4 0.7 histidine kinase compare
PFLU_RS02360 +0.4 2.8 PIG-L family deacetylase compare
PFLU_RS00410 +0.4 3.0 cytochrome c4 compare
PFLU_RS24535 +0.4 0.8 DUF3509 domain-containing protein compare
PFLU_RS00870 +0.4 0.7 hypothetical protein compare
PFLU_RS24455 +0.4 1.6 membrane protein FxsA compare
PFLU_RS20760 +0.4 2.5 hypothetical protein compare
PFLU_RS11000 +0.4 1.4 cysteine dioxygenase compare
PFLU_RS15910 +0.4 0.6 homoprotocatechuate degradation operon regulator HpaR compare
PFLU_RS29505 +0.4 1.5 DNA-directed RNA polymerase subunit omega compare
PFLU_RS31465 +0.4 2.6 hypothetical protein compare
PFLU_RS16310 +0.4 0.8 hypothetical protein compare
PFLU_RS07320 +0.4 1.9 hypothetical protein compare
PFLU_RS30590 +0.4 0.7 hypothetical protein compare
PFLU_RS12730 +0.4 2.1 hypothetical protein compare
PFLU_RS20990 +0.4 1.6 zinc-binding dehydrogenase compare
PFLU_RS08350 +0.4 0.7 ABC transporter ATP-binding protein compare
PFLU_RS15260 +0.4 1.7 response regulator compare
PFLU_RS02000 +0.4 3.8 penicillin-binding protein 1A compare
PFLU_RS24300 +0.4 1.1 hypothetical protein compare
PFLU_RS09220 +0.4 2.4 TetR/AcrR family transcriptional regulator compare
PFLU_RS10960 +0.4 1.3 transcriptional regulator LrhA compare
PFLU_RS11930 +0.4 1.1 biopolymer transporter ExbD compare
PFLU_RS26985 +0.4 2.1 alpha/beta fold hydrolase compare
PFLU_RS11415 +0.4 1.0 protein glxC compare
PFLU_RS05105 +0.4 1.8 tetratricopeptide repeat protein compare
PFLU_RS18575 +0.4 2.5 NUDIX hydrolase compare
PFLU_RS18140 +0.4 2.2 LLM class flavin-dependent oxidoreductase compare
PFLU_RS29955 +0.4 1.6 RNA polymerase-binding protein DksA compare
PFLU_RS13715 +0.4 0.8 MmcQ/YjbR family DNA-binding protein compare
PFLU_RS25655 +0.4 2.7 YqcC family protein compare
PFLU_RS20920 +0.4 1.2 FadR family transcriptional regulator compare
PFLU_RS11100 +0.4 1.8 integrase compare
PFLU_RS17955 +0.4 1.8 hypothetical protein compare
PFLU_RS14970 +0.4 1.4 alpha/beta hydrolase compare
PFLU_RS17630 +0.4 1.6 type 1 glutamine amidotransferase compare
PFLU_RS02690 +0.4 0.7 hypothetical protein compare
PFLU_RS07380 +0.4 1.7 LysR family transcriptional regulator compare
PFLU_RS17150 +0.4 1.7 hypothetical protein compare
PFLU_RS11410 +0.4 1.6 glutamine amidotransferase family protein compare
PFLU_RS21330 +0.4 1.4 hypothetical protein compare
PFLU_RS08235 +0.4 1.6 potassium-transporting ATPase subunit KdpC compare
PFLU_RS01640 +0.4 1.7 divergent polysaccharide deacetylase family protein compare
PFLU_RS11345 +0.4 1.8 MFS transporter compare
PFLU_RS15310 +0.4 0.8 YgdI/YgdR family lipoprotein compare
PFLU_RS17785 +0.4 2.1 hypothetical protein compare
PFLU_RS11805 +0.4 1.4 DoxX family protein compare
PFLU_RS31185 +0.4 1.7 hypothetical protein compare
PFLU_RS21725 +0.4 2.5 flagellar motor switch protein FliM compare
PFLU_RS13810 +0.4 1.7 hypothetical protein compare
PFLU_RS14250 +0.4 1.7 MFS transporter compare
PFLU_RS17545 +0.4 0.5 DUF465 domain-containing protein compare
PFLU_RS10235 +0.4 1.9 glycosyltransferase compare
PFLU_RS11370 +0.4 1.3 sarcosine oxidase compare
PFLU_RS25410 +0.4 2.3 D-aminoacylase compare
PFLU_RS24995 +0.4 1.1 STAS domain-containing protein compare
PFLU_RS11510 +0.4 1.5 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II compare
PFLU_RS17360 +0.4 2.1 hypothetical protein compare
PFLU_RS18555 +0.4 2.2 ATP-dependent Clp protease adapter ClpS compare
PFLU_RS12680 +0.4 1.4 DUF3995 domain-containing protein compare
PFLU_RS19800 +0.4 1.2 cupin domain-containing protein compare
PFLU_RS18110 +0.4 1.7 GlxA family transcriptional regulator compare
PFLU_RS01665 +0.4 0.9 glutaredoxin 3 compare
PFLU_RS29940 +0.4 1.5 cobalamin biosynthesis protein CobW compare
PFLU_RS31145 +0.4 1.8 hypothetical protein compare
PFLU_RS06410 +0.4 2.0 tRNA pseudouridine(13) synthase TruD compare
PFLU_RS08280 +0.4 0.9 hypothetical protein compare
PFLU_RS00795 +0.4 2.2 RDD family protein compare
PFLU_RS20390 +0.4 1.3 DUF1654 domain-containing protein compare
PFLU_RS15115 +0.4 2.0 cytochrome b compare
PFLU_RS13955 +0.4 1.7 hypothetical protein compare
PFLU_RS02875 +0.4 1.2 urease subunit gamma compare
PFLU_RS10240 +0.4 2.6 LPS biosynthesis protein compare
PFLU_RS23935 +0.4 1.7 response regulator transcription factor compare
PFLU_RS17675 +0.4 1.5 hypothetical protein compare
PFLU_RS17815 +0.3 1.0 response regulator compare
PFLU_RS30460 +0.3 1.4 L-aspartate oxidase compare
PFLU_RS28120 +0.3 1.0 DUF1090 domain-containing protein compare
PFLU_RS19840 +0.3 1.9 hypothetical protein compare
PFLU_RS20245 +0.3 1.8 DUF2313 domain-containing protein compare
PFLU_RS13835 +0.3 1.4 phage recombination protein Bet compare
PFLU_RS07560 +0.3 1.8 allophanate hydrolase subunit 1 compare
PFLU_RS01515 +0.3 1.2 cellulose synthase operon protein YhjQ compare
PFLU_RS08370 +0.3 1.3 hypothetical protein compare
PFLU_RS12840 +0.3 0.8 3-hydroxybutyrate dehydrogenase compare
PFLU_RS20975 +0.3 1.6 amino acid ABC transporter permease/ATP-binding protein compare
PFLU_RS10595 +0.3 1.2 hypothetical protein compare
PFLU_RS03910 +0.3 1.5 DUF3094 family protein compare
PFLU_RS06940 +0.3 1.8 sigma-70 family RNA polymerase sigma factor compare


Specific Phenotypes

For 1 genes in this experiment

For stress Sucrose in Pseudomonas fluorescens SBW25-INTG

For stress Sucrose across organisms