Experiment set11IT042 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Sparassol 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_0951 -4.3 -4.2 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4340 -3.9 -8.5 phosphomethylpyrimidine kinase, putative compare
Psyr_4740 -3.8 -5.2 thiazole-phosphate synthase compare
Psyr_1544 -3.4 -4.5 SirA-like protein compare
Psyr_1613 -3.0 -5.0 septum site-determining protein MinC compare
Psyr_3008 -2.9 -8.7 Undecaprenyl-diphosphatase compare
Psyr_0475 -2.7 -2.5 Protein of unknown function YGGT compare
Psyr_1663 -2.7 -3.5 phosphoribosylanthranilate isomerase compare
Psyr_4687 -2.6 -7.3 biotin synthase compare
Psyr_0849 -2.5 -10.2 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_4686 -2.4 -6.5 8-amino-7-oxononanoate synthase compare
Psyr_4091 -2.3 -4.9 8-oxo-dGTPase compare
Psyr_4341 -2.3 -6.3 thiamine-phosphate diphosphorylase compare
Psyr_0454 -2.2 -5.4 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_1556 -2.2 -3.2 hypothetical protein compare
Psyr_4203 -2.1 -2.9 SsrA-binding protein compare
Psyr_4683 -2.0 -4.6 dethiobiotin synthase compare
Psyr_0918 -1.9 -11.1 ABC transporter compare
Psyr_4991 -1.9 -3.0 hypothetical protein compare
Psyr_0574 -1.8 -5.4 protease FtsH subunit HflK compare
Psyr_2347 -1.7 -3.1 hypothetical protein compare
Psyr_0917 -1.7 -9.0 ABC-2 compare
Psyr_0927 -1.7 -4.9 hypothetical protein compare
Psyr_2642 -1.7 -4.4 hypothetical protein compare
Psyr_1907 -1.6 -3.5 GTP cyclohydrolase I compare
Psyr_4362 -1.6 -3.7 Rare lipoprotein A compare
Psyr_0565 -1.6 -5.7 Protein of unknown function UPF0126 compare
Psyr_4581 -1.6 -3.4 anthranilate synthase, component II compare
Psyr_2973 -1.6 -2.7 Glyoxalase I compare
Psyr_4580 -1.6 -2.5 anthranilate phosphoribosyltransferase compare
Psyr_2894 -1.5 -2.1 conserved hypothetical protein compare
Psyr_1555 -1.5 -3.2 Cobyrinic acid a,c-diamide synthase compare
Psyr_3013 -1.5 -2.5 magnesium chelatase subunit ChlD compare
Psyr_1751 -1.5 -4.1 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_4822 -1.4 -3.7 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_0014 -1.4 -3.7 lipid A biosynthesis acyltransferase compare
Psyr_2854 -1.4 -4.7 conserved hypothetical protein compare
Psyr_0571 -1.4 -3.2 tRNA isopentenyltransferase compare
Psyr_0826 -1.4 -5.9 glucose-6-phosphate isomerase compare
Psyr_3954 -1.3 -4.4 GTP-binding protein LepA compare
Psyr_3121 -1.3 -3.1 Protein of unknown function DUF1345 compare
Psyr_0487 -1.3 -2.6 glutathione synthase compare
Psyr_4684 -1.3 -2.8 biotin synthesis protein BioC compare
Psyr_3090 -1.3 -2.5 hypothetical protein compare
Psyr_4884 -1.3 -4.4 Rhodanese-like protein compare
Psyr_1389 -1.2 -3.2 Protein of unknown function DUF1456 compare
Psyr_0259 -1.2 -2.2 Osmolarity sensor protein envZ compare
Psyr_5132 -1.2 -2.9 Glucose-inhibited division protein A subfamily compare
Psyr_3806 -1.2 -4.6 hypothetical protein compare
Psyr_2855 -1.1 -3.2 methionine synthase (B12-independent) compare
Psyr_0034 -1.1 -0.8 tryptophan synthase, beta chain compare
Psyr_3620 -1.1 -1.7 hypothetical protein compare
Psyr_2980 -1.1 -2.7 UDP-glucose pyrophosphorylase compare
Psyr_2346 -1.1 -3.7 conserved hypothetical protein compare
Psyr_4830 -1.1 -2.5 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2593 -1.1 -2.6 ABC transporter compare
Psyr_3419 -1.1 -3.5 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_2092 -1.1 -2.9 Protein of unknown function 1935 compare
Psyr_3581 -1.1 -4.6 ribosomal large subunit pseudouridine synthase B compare
Psyr_3193 -1.1 -2.0 Transcription factor jumonji, jmjC compare
Psyr_4566 -1.1 -6.3 Peptidase M23B compare
Psyr_2664 -1.0 -4.7 hypothetical protein compare
Psyr_1350 -1.0 -2.7 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_1408 -1.0 -1.9 Holliday junction endonuclease RuvC compare
Psyr_1190 -1.0 -3.8 type III transcriptional regulator HrpR compare
Psyr_1198 -1.0 -2.1 type III secretion protein HrpF compare
Psyr_1667 -1.0 -4.3 Colicin V production protein compare
Psyr_5133 -1.0 -3.0 tRNA modification GTPase trmE compare
Psyr_0383 -1.0 -1.4 Twin-arginine translocation protein TatB compare
Psyr_1419 -1.0 -2.4 preQ(0) biosynthesis protein QueC compare
Psyr_0282 -1.0 -3.6 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0215 -1.0 -6.1 Exodeoxyribonuclease III xth compare
Psyr_3886 -0.9 -1.4 methionyl-tRNA synthetase compare
Psyr_2847 -0.9 -2.1 hypothetical protein compare
Psyr_3107 -0.9 -2.4 conserved hypothetical protein compare
Psyr_1410 -0.9 -2.8 Holliday junction DNA helicase RuvB compare
Psyr_5129 -0.9 -2.8 chromosome segregation DNA-binding protein compare
Psyr_2462 -0.9 -3.1 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_3084 -0.9 -2.8 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_0575 -0.9 -2.2 protease FtsH subunit HflC compare
Psyr_3208 -0.9 -1.8 NADH dehydrogenase subunit M compare
Psyr_3952 -0.9 -2.9 conserved hypothetical protein compare
Psyr_3290 -0.8 -2.1 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_1748 -0.8 -3.3 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_4893 -0.8 -1.1 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_1972 -0.8 -2.5 conserved hypothetical protein compare
Psyr_0528 -0.8 -1.9 Carbamoyltransferase compare
Psyr_2270 -0.8 -2.5 transferase hexapeptide repeat protein compare
Psyr_1791 -0.8 -1.8 HAD-superfamily hydrolase, subfamily IA, variant 2 compare
Psyr_3439 -0.8 -3.5 GTP-binding signal recognition particle SRP54, G-domain protein compare
Psyr_3427 -0.8 -1.0 conserved hypothetical protein compare
Psyr_1806 -0.8 -2.2 Ureidoglycolate hydrolase compare
Psyr_1227 -0.8 -1.9 Queuosine biosynthesis protein compare
Psyr_3104 -0.8 -2.1 phosphate ABC transporter membrane protein 2, PhoT family compare
Psyr_4089 -0.8 -3.4 PAS compare
Psyr_2848 -0.8 -2.7 hypothetical protein compare
Psyr_0493 -0.8 -1.3 CheW-like protein compare
Psyr_4464 -0.8 -1.2 lipoprotein, putative compare
Psyr_1930 -0.8 -1.8 hypothetical protein compare
Psyr_3152 -0.8 -0.8 hypothetical protein compare
Psyr_3466 -0.8 -1.9 Flagellin, C-terminal:Flagellin, N-terminal compare
Psyr_2135 -0.8 -2.7 molybdenum cofactor guanylyltransferase compare
Psyr_2060 -0.8 -2.3 Sec-independent protein translocase TatD compare
Psyr_1944 -0.7 -2.2 Thioesterase compare
Psyr_4512 -0.7 -4.1 putative phage-related protein compare
Psyr_0524 -0.7 -2.2 Lipopolysaccharide kinase compare
Psyr_4786 -0.7 -1.7 hypothetical protein compare
Psyr_2897 -0.7 -3.0 regulatory protein, LuxR:Response regulator receiver compare
Psyr_1747 -0.7 -2.1 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_2668 -0.7 -2.3 Helix-turn-helix, Fis-type compare
Psyr_4480 -0.7 -1.8 outer membrane transport energization protein TonB compare
Psyr_0916 -0.7 -5.0 GDP-mannose 4,6-dehydratase compare
Psyr_2518 -0.7 -3.4 conserved hypothetical protein compare
Psyr_4138 -0.7 -2.1 Toluene tolerance compare
Psyr_0638 -0.7 -2.1 Peptidase S16, lon N-terminal compare
Psyr_1935 -0.7 -2.3 Protein of unknown function DUF796 compare
Psyr_2406 -0.7 -1.9 Flavin reductase-like protein compare
Psyr_3135 -0.7 -1.5 transcriptional regulator, GntR family compare
Psyr_0919 -0.7 -5.1 Chromosome segregation ATPase-like protein compare
Psyr_2351 -0.7 -2.2 tRNA synthetase, class-II (G, H, P and S) compare
Psyr_0827 -0.7 -2.5 pantothenate synthetase compare
Psyr_3258 -0.7 -2.1 conserved hypothetical protein compare
Psyr_2899 -0.7 -2.5 conserved hypothetical protein compare
Psyr_3311 -0.7 -2.0 Virulence factor MVIN-like protein compare
Psyr_0170 -0.7 -1.9 heat shock protein Hsp15 compare
Psyr_5135 -0.7 -1.0 Protein of unknown function DUF37 compare
Psyr_2630 -0.7 -3.2 conserved hypothetical protein compare
Psyr_4361 -0.7 -2.2 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 compare
Psyr_0920 -0.7 -5.7 Glycosyl transferase, group 1 compare
Psyr_1528 -0.7 -1.4 Arc-like DNA binding protein compare
Psyr_0579 -0.7 -4.7 RNAse R compare
Psyr_3598 -0.7 -2.4 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0202 -0.7 -3.8 transcriptional regulator, LysR family compare
Psyr_1931 -0.6 -3.1 hypothetical protein compare
Psyr_1975 -0.6 -1.2 Integrase, catalytic region compare
Psyr_1404 -0.6 -4.2 Ferritin and Dps compare
Psyr_2769 -0.6 -2.4 conserved hypothetical protein compare
Psyr_2770 -0.6 -3.0 tail fiber domain protein compare
Psyr_0281 -0.6 -2.1 ABC transporter compare
Psyr_5130 -0.6 -3.6 chromosome segregation ATPase compare
Psyr_3377 -0.6 -1.6 transcriptional regulator, MarR family compare
Psyr_3808 -0.6 -0.8 hypothetical protein compare
Psyr_1553 -0.6 -2.3 hypothetical protein compare
Psyr_4609 -0.6 -4.4 anthranilate synthase, component I compare
Psyr_0941 -0.6 -3.4 Conserved hypothetical protein 92 compare
Psyr_2327 -0.6 -1.4 GTP cyclohydrolase subunit MoaA compare
Psyr_0492 -0.6 -4.2 Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt compare
Psyr_3604 -0.6 -1.4 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region compare
Psyr_1268 -0.6 -3.0 extracellular solute-binding protein, family 3:SLT compare
Psyr_0376 -0.6 -2.1 D-tyrosyl-tRNA(Tyr) deacylase compare
Psyr_0025 -0.6 -2.2 shikimate dehydrogenase compare
Psyr_1802 -0.6 -1.3 transcriptional regulator, AsnC family compare
Psyr_4262 -0.6 -1.0 lipoprotein, putative compare
Psyr_1371 -0.6 -3.3 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_3476 -0.6 -1.2 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_2071 -0.6 -0.9 outer membrane lipoprotein OprI compare
Psyr_3287 -0.6 -1.2 DNA topoisomerase I compare
Psyr_3585 -0.6 -1.8 Sua5/YciO/YrdC/YwlC compare
Psyr_3528 -0.6 -3.2 hypothetical protein compare
Psyr_2645 -0.6 -2.4 hypothetical protein compare
Psyr_2797 -0.6 -2.6 hypothetical protein compare
Psyr_4416 -0.6 -1.8 precorrin-8X methylmutase compare
Psyr_2990 -0.6 -1.8 conserved hypothetical protein compare
Psyr_1250 -0.6 -1.6 conserved hypothetical protein compare
Psyr_4062 -0.6 -1.7 Pyridoxamine 5'-phosphate oxidase-related protein compare
Psyr_4451 -0.6 -1.6 UreE urease accessory, N-terminal:UreE urease accessory, C-terminal compare
Psyr_3809 -0.6 -2.2 hypothetical protein compare
Psyr_1315 -0.6 -2.2 lipoprotein, putative compare
Psyr_3807 -0.6 -2.4 hypothetical protein compare
Psyr_1269 -0.6 -1.6 phosphoribosylformylglycinamidine synthase compare
Psyr_3020 -0.6 -1.1 precorrin-4 C11-methyltransferase compare
Psyr_2798 -0.6 -3.0 hypothetical protein compare
Psyr_2301 -0.6 -2.6 Short-chain dehydrogenase/reductase SDR compare
Psyr_2596 -0.6 -3.3 PAS compare
Psyr_2535 -0.6 -2.1 GGDEF domain protein compare
Psyr_4622 -0.6 -2.0 Nucleotidyl transferase compare
Psyr_1692 -0.6 -2.3 conserved hypothetical protein compare
Psyr_4350 -0.6 -1.2 Protein of unknown function DUF218 compare
Psyr_3240 -0.6 -1.3 CTP synthase compare
Psyr_1037 -0.6 -2.1 ribosomal subunit interface protein, putative compare
Psyr_2657 -0.6 -3.0 hypothetical protein compare
Psyr_0580 -0.6 -2.1 23S rRNA Gm-2251 2'-O-methyltransferase compare
Psyr_2625 -0.6 -3.1 lipoprotein, putative compare
Psyr_3088 -0.6 -2.1 Glycosyl transferase, group 1 compare
Psyr_4519 -0.6 -3.2 General substrate transporter:Major facilitator superfamily compare
Psyr_2348 -0.6 -1.0 hypothetical protein compare
Psyr_4316 -0.6 -1.7 conserved hypothetical protein compare
Psyr_4278 -0.6 -1.3 regulatory protein, LuxR compare
Psyr_2471 -0.6 -1.2 hydroxymethylglutaryl-CoA lyase compare
Psyr_4920 -0.5 -1.1 conserved hypothetical bacteriophage protein compare
Psyr_0680 -0.5 -1.8 DNA helicase/exodeoxyribonuclease V, gamma subunit compare
Psyr_1357 -0.5 -1.5 RNase HII compare
Psyr_4658 -0.5 -1.3 CDS compare
Psyr_2601 -0.5 -3.1 regulatory protein, LuxR compare
Psyr_4140 -0.5 -1.3 Protein of unknown function DUF140 compare
Psyr_0319 -0.5 -3.0 conserved hypothetical protein compare
Psyr_3897 -0.5 -3.6 Bacterioferritin compare
Psyr_3616 -0.5 -3.2 Heat shock protein, Metallo peptidase, MEROPS family M48B compare
Psyr_0835 -0.5 -2.1 transcriptional regulator, TraR/DksA family compare
Psyr_4874 -0.5 -0.9 ABC transporter compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Sparassol across organisms