Experiment set11IT039 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_3008 -4.2 -8.5 Undecaprenyl-diphosphatase compare
Psyr_4340 -4.1 -8.2 phosphomethylpyrimidine kinase, putative compare
Psyr_1544 -4.0 -4.7 SirA-like protein compare
Psyr_4740 -3.4 -6.0 thiazole-phosphate synthase compare
Psyr_0951 -3.3 -4.9 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4341 -3.0 -8.6 thiamine-phosphate diphosphorylase compare
Psyr_1663 -3.0 -3.5 phosphoribosylanthranilate isomerase compare
Psyr_4683 -2.9 -5.2 dethiobiotin synthase compare
Psyr_1613 -2.9 -5.4 septum site-determining protein MinC compare
Psyr_4686 -2.9 -6.6 8-amino-7-oxononanoate synthase compare
Psyr_4991 -2.9 -3.3 hypothetical protein compare
Psyr_0454 -2.7 -6.0 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_4687 -2.6 -7.7 biotin synthase compare
Psyr_0849 -2.4 -10.6 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_4580 -2.1 -3.1 anthranilate phosphoribosyltransferase compare
Psyr_4091 -2.0 -4.0 8-oxo-dGTPase compare
Psyr_1373 -1.9 -3.5 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_0475 -1.9 -3.0 Protein of unknown function YGGT compare
Psyr_0917 -1.8 -10.4 ABC-2 compare
Psyr_4822 -1.8 -4.1 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_0574 -1.8 -5.4 protease FtsH subunit HflK compare
Psyr_0259 -1.8 -4.1 Osmolarity sensor protein envZ compare
Psyr_4754 -1.8 -3.0 16S rRNA m(2)G-966 methyltransferase compare
Psyr_4684 -1.7 -3.3 biotin synthesis protein BioC compare
Psyr_4627 -1.7 -2.6 dimethyladenosine transferase compare
Psyr_0918 -1.7 -10.0 ABC transporter compare
Psyr_0575 -1.7 -3.7 protease FtsH subunit HflC compare
Psyr_1408 -1.7 -3.2 Holliday junction endonuclease RuvC compare
Psyr_1748 -1.6 -5.8 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_4362 -1.6 -3.2 Rare lipoprotein A compare
Psyr_3954 -1.5 -5.8 GTP-binding protein LepA compare
Psyr_1751 -1.5 -4.4 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_3193 -1.5 -2.8 Transcription factor jumonji, jmjC compare
Psyr_4136 -1.5 -2.7 BolA-like protein compare
Psyr_0565 -1.4 -5.5 Protein of unknown function UPF0126 compare
Psyr_2594 -1.4 -1.5 unknown conserved protein in bacilli compare
Psyr_0826 -1.4 -6.4 glucose-6-phosphate isomerase compare
Psyr_1667 -1.4 -4.6 Colicin V production protein compare
Psyr_1907 -1.4 -3.4 GTP cyclohydrolase I compare
Psyr_1419 -1.4 -3.1 preQ(0) biosynthesis protein QueC compare
Psyr_4884 -1.3 -4.4 Rhodanese-like protein compare
Psyr_2757 -1.3 -2.7 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2848 -1.3 -4.3 hypothetical protein compare
Psyr_0493 -1.3 -2.4 CheW-like protein compare
Psyr_2347 -1.3 -2.2 hypothetical protein compare
Psyr_1250 -1.3 -3.8 conserved hypothetical protein compare
Psyr_3287 -1.3 -2.2 DNA topoisomerase I compare
Psyr_3806 -1.2 -5.0 hypothetical protein compare
Psyr_3581 -1.2 -4.6 ribosomal large subunit pseudouridine synthase B compare
Psyr_1556 -1.2 -2.2 hypothetical protein compare
Psyr_4203 -1.2 -1.8 SsrA-binding protein compare
Psyr_2312 -1.2 -1.8 Protein of unknown function DUF24 compare
Psyr_1588 -1.2 -3.4 Putative exonuclease, RdgC compare
Psyr_4634 -1.2 -2.2 Polynucleotide adenylyltransferase:Metal-dependent phosphohydrolase, HD subdomain protein compare
Psyr_0215 -1.2 -7.6 Exodeoxyribonuclease III xth compare
Psyr_4581 -1.1 -2.2 anthranilate synthase, component II compare
Psyr_3293 -1.1 -1.8 UspA compare
Psyr_2769 -1.1 -2.8 conserved hypothetical protein compare
Psyr_5132 -1.1 -2.7 Glucose-inhibited division protein A subfamily compare
Psyr_5135 -1.1 -2.0 Protein of unknown function DUF37 compare
Psyr_2471 -1.1 -1.3 hydroxymethylglutaryl-CoA lyase compare
Psyr_0444 -1.1 -1.5 Malonate decarboxylase delta subunit compare
Psyr_5133 -1.1 -3.3 tRNA modification GTPase trmE compare
Psyr_2095 -1.1 -4.3 Conserved TM helix compare
Psyr_0487 -1.1 -2.2 glutathione synthase compare
Psyr_2406 -1.1 -2.8 Flavin reductase-like protein compare
Psyr_0255 -1.0 -2.0 glutamate-cysteine ligase compare
Psyr_0034 -1.0 -1.1 tryptophan synthase, beta chain compare
Psyr_4089 -1.0 -4.2 PAS compare
Psyr_1097 -1.0 -2.3 glycine cleavage system H protein compare
Psyr_4609 -1.0 -6.8 anthranilate synthase, component I compare
Psyr_4893 -1.0 -2.3 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_1140 -1.0 -2.7 Disulfide bond formation protein DsbB compare
Psyr_0571 -0.9 -2.7 tRNA isopentenyltransferase compare
Psyr_0529 -0.9 -4.0 Glycosyl transferase, group 1 compare
Psyr_1688 -0.9 -2.2 Protein of unknown function DUF1315 compare
Psyr_2456 -0.9 -2.4 Short-chain dehydrogenase/reductase SDR compare
Psyr_0281 -0.9 -2.3 ABC transporter compare
Psyr_3198 -0.9 -1.9 NADH dehydrogenase subunit B compare
Psyr_3152 -0.9 -1.6 hypothetical protein compare
Psyr_2854 -0.9 -2.8 conserved hypothetical protein compare
Psyr_0282 -0.9 -3.8 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1555 -0.9 -2.7 Cobyrinic acid a,c-diamide synthase compare
Psyr_3013 -0.9 -1.4 magnesium chelatase subunit ChlD compare
Psyr_1930 -0.9 -2.4 hypothetical protein compare
Psyr_3179 -0.9 -1.6 DNA translocase FtsK compare
Psyr_0724 -0.9 -1.7 conserved hypothetical protein compare
Psyr_1747 -0.9 -2.9 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_3665 -0.9 -2.0 conserved hypothetical protein compare
Psyr_2462 -0.9 -2.7 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_2285 -0.9 -1.8 Twin-arginine translocation pathway signal compare
Psyr_4786 -0.9 -0.9 hypothetical protein compare
Psyr_1749 -0.8 -4.4 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_3450 -0.8 -3.4 Hpt compare
Psyr_1931 -0.8 -4.0 hypothetical protein compare
Psyr_1350 -0.8 -2.8 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_3208 -0.8 -1.9 NADH dehydrogenase subunit M compare
Psyr_1418 -0.8 -2.3 Radical SAM compare
Psyr_5065 -0.8 -4.8 ATP-dependent DNA helicase UvrD compare
Psyr_4057 -0.8 -3.0 regulatory protein, LysR:LysR, substrate-binding protein compare
Psyr_2540 -0.8 -1.4 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_3202 -0.8 -1.3 NADH dehydrogenase subunit G compare
Psyr_1935 -0.8 -2.9 Protein of unknown function DUF796 compare
Psyr_4140 -0.8 -1.8 Protein of unknown function DUF140 compare
Psyr_4490 -0.8 -1.5 transcriptional regulator, DeoR family compare
Psyr_1944 -0.8 -2.4 Thioesterase compare
Psyr_2067 -0.8 -1.3 ABC transporter compare
Psyr_4566 -0.8 -5.1 Peptidase M23B compare
Psyr_2921 -0.8 -2.2 ADP-ribosylglycohydrolase compare
Psyr_3346 -0.8 -3.1 conserved hypothetical protein compare
Psyr_2642 -0.7 -3.1 hypothetical protein compare
Psyr_2346 -0.7 -2.7 conserved hypothetical protein compare
Psyr_2420 -0.7 -2.3 conserved hypothetical protein compare
Psyr_1371 -0.7 -3.7 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_1212 -0.7 -2.1 type III secretion protein HrpO compare
Psyr_3946 -0.7 -2.9 Proteobacterial methyltransferase compare
Psyr_2348 -0.7 -1.9 hypothetical protein compare
Psyr_1460 -0.7 -3.0 hypothetical protein compare
Psyr_3164 -0.7 -4.1 Protein of unknown function UPF0005 compare
Psyr_0919 -0.7 -4.8 Chromosome segregation ATPase-like protein compare
Psyr_1975 -0.7 -1.7 Integrase, catalytic region compare
Psyr_3807 -0.7 -3.5 hypothetical protein compare
Psyr_4112 -0.7 -4.6 Protein of unknown function UPF0011 compare
Psyr_2351 -0.7 -2.3 tRNA synthetase, class-II (G, H, P and S) compare
Psyr_4512 -0.7 -3.4 putative phage-related protein compare
Psyr_3240 -0.7 -2.2 CTP synthase compare
Psyr_4830 -0.7 -1.4 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3808 -0.7 -0.5 hypothetical protein compare
Psyr_4476 -0.7 -3.0 dTDP-4-dehydrorhamnose reductase compare
Psyr_0406 -0.7 -2.9 Pilus assembly protein, PilQ compare
Psyr_0549 -0.7 -1.6 Metallophosphoesterase compare
Psyr_0202 -0.7 -4.0 transcriptional regulator, LysR family compare
Psyr_2143 -0.7 -1.5 delta1-piperideine 2-carboxylate reductase compare
Psyr_2820 -0.7 -1.8 RecT protein compare
Psyr_4519 -0.7 -4.0 General substrate transporter:Major facilitator superfamily compare
Psyr_3793 -0.7 -1.8 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_0492 -0.6 -4.5 Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt compare
Psyr_1417 -0.6 -2.8 TPR repeat protein compare
Psyr_3090 -0.6 -1.4 hypothetical protein compare
Psyr_0941 -0.6 -3.5 Conserved hypothetical protein 92 compare
Psyr_2188 -0.6 -2.1 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer:CHASE3 compare
Psyr_4254 -0.6 -1.5 conserved hypothetical protein compare
Psyr_RNA61 -0.6 -2.2 tRNA-Gly compare
Psyr_1864 -0.6 -1.8 spermidine synthase compare
Psyr_1694 -0.6 -1.8 Rhomboid-like protein compare
Psyr_2612 -0.6 -1.2 syrP protein, putative compare
Psyr_1947 -0.6 -1.8 MbtH-like protein compare
Psyr_1357 -0.6 -2.1 RNase HII compare
Psyr_4424 -0.6 -3.1 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_0579 -0.6 -4.4 RNAse R compare
Psyr_3934 -0.6 -1.3 Short-chain dehydrogenase/reductase SDR compare
Psyr_1832 -0.6 -1.3 Exonuclease compare
Psyr_2847 -0.6 -1.6 hypothetical protein compare
Psyr_4062 -0.6 -1.9 Pyridoxamine 5'-phosphate oxidase-related protein compare
Psyr_1225 -0.6 -2.4 hypothetical protein compare
Psyr_2292 -0.6 -1.4 L-glutaminase compare
Psyr_4622 -0.6 -2.1 Nucleotidyl transferase compare
Psyr_2375 -0.6 -1.7 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_4562 -0.6 -2.7 conserved domain protein compare
Psyr_3290 -0.6 -1.9 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_1050 -0.6 -2.2 conserved hypothetical protein compare
Psyr_2190 -0.6 -1.0 NADH:flavin oxidoreductase/NADH oxidase compare
Psyr_0916 -0.6 -4.0 GDP-mannose 4,6-dehydratase compare
Psyr_2433 -0.6 -1.8 conserved hypothetical protein compare
Psyr_2227 -0.6 -1.3 conserved hypothetical protein compare
Psyr_3867 -0.6 -0.8 hypothetical protein compare
Psyr_0349 -0.6 -2.1 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3135 -0.6 -1.2 transcriptional regulator, GntR family compare
Psyr_2770 -0.6 -3.2 tail fiber domain protein compare
Psyr_0535 -0.6 -1.6 toluene tolerance protein, putative compare
Psyr_2604 -0.6 -2.1 conserved hypothetical protein; putative membrane protein compare
Psyr_3952 -0.6 -1.6 conserved hypothetical protein compare
Psyr_0033 -0.6 -0.6 tryptophan synthase, alpha chain compare
Psyr_2397 -0.6 -2.1 transcriptional regulator, LysR family compare
Psyr_2840 -0.6 -1.5 hypothetical protein compare
Psyr_0373 -0.6 -1.0 CDS compare
Psyr_0174 -0.6 -3.4 Sodium:dicarboxylate symporter compare
Psyr_0923 -0.6 -2.7 hypothetical protein compare
Psyr_4480 -0.6 -1.1 outer membrane transport energization protein TonB compare
Psyr_3854 -0.6 -0.9 OmpA/MotB compare
Psyr_2345 -0.6 -2.1 ea59 protein compare
Psyr_0835 -0.6 -2.5 transcriptional regulator, TraR/DksA family compare
Psyr_2520 -0.6 -1.2 SOS-response transcriptional repressor, LexA compare
Psyr_3374 -0.5 -1.2 Heavy metal response regulator compare
Psyr_2059 -0.5 -1.9 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer compare
Psyr_2367 -0.5 -2.6 ABC-3 compare
Psyr_0920 -0.5 -4.7 Glycosyl transferase, group 1 compare
Psyr_0464 -0.5 -1.0 hypothetical protein compare
Psyr_3403 -0.5 -2.9 conserved hypothetical protein compare
Psyr_1017 -0.5 -1.5 type III effector HopJ1 compare
Psyr_2664 -0.5 -2.8 hypothetical protein compare
Psyr_4598 -0.5 -2.2 lipoprotein, putative compare
Psyr_4408 -0.5 -3.1 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_5131 -0.5 -2.6 16S rRNA m(7)G-527 methyltransferase compare
Psyr_1094 -0.5 -1.5 cold-shock DNA-binding protein family compare
Psyr_0817 -0.5 -2.2 N-acetylmuramoyl-L-alanine amidase, family 2 compare
Psyr_1686 -0.5 -1.9 Metallophosphoesterase compare
Psyr_2254 -0.5 -2.3 Phosphonate metabolism PhnJ compare
Psyr_3554 -0.5 -1.2 Carbon storage regulator compare
Psyr_0789 -0.5 -2.1 chemotaxis sensory transducer compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Methyl-2-Hydroxy-Phenylproprionate across organisms