Experiment set11IT039 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

BHIS with Lithocholic acid 0.4 mg/ml

200 most important genes:

  gene name fitness t score description  
BT1127 -3.3 -1.9 mobilization protein BmgB (NCBI ptt file) compare
BT4063 -2.8 -2.5 NADH dehydrogenase I, chain I (NCBI ptt file) compare
BT2487 -2.8 -1.1 hypothetical protein (NCBI ptt file) compare
BT0490 -2.6 -1.5 hypothetical protein (NCBI ptt file) compare
BT4343 -2.4 -5.0 conserved hypothetical protein (NCBI ptt file) compare
BT4469 -2.2 -2.8 conserved hypothetical protein (NCBI ptt file) compare
BT4249 -2.2 -1.2 hypothetical protein (NCBI ptt file) compare
BT2284 -2.1 -1.5 hypothetical protein (NCBI ptt file) compare
BT0638 -2.0 -5.2 putative methionine aminopeptidase A (NCBI ptt file) compare
BT0596 -2.0 -1.1 putative transcriptional regulator (NCBI ptt file) compare
BT3502 -2.0 -3.5 hypothetical protein (NCBI ptt file) compare
BT4735 -2.0 -2.0 hypothetical protein (NCBI ptt file) compare
BT1991 -2.0 -2.7 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT4271 -2.0 -2.3 hypothetical protein (NCBI ptt file) compare
BT4551 -1.9 -1.9 putative GTPase, ThdF family (NCBI ptt file) compare
BT0739 -1.9 -1.7 hypothetical protein (NCBI ptt file) compare
BT0321 -1.9 -2.2 cytidine/deoxycytidylate deaminase (NCBI ptt file) compare
BT4102 -1.9 -1.9 putative Sec-independent protein translocase (NCBI ptt file) compare
BT2688 -1.9 -4.7 outer membrane efflux protein (NCBI ptt file) compare
BT4097 -1.9 -1.3 Trk system K+ uptake protein trkH (NCBI ptt file) compare
BT3210 -1.9 -2.0 cell division protein FtsX (NCBI ptt file) compare
BT1125 -1.9 -2.9 hypothetical protein (NCBI ptt file) compare
BT1232 -1.9 -1.3 hypothetical protein (NCBI ptt file) compare
BT1154 -1.9 -2.2 ATP-independent RNA helicase (NCBI ptt file) compare
BT4534 -1.9 -2.5 hypothetical protein (NCBI ptt file) compare
BT0891 -1.9 -2.7 dihydroorotate dehydrogenase electron transfer subunit (NCBI ptt file) compare
BT0585 -1.9 -1.6 conserved hypothetical protein (NCBI ptt file) compare
BT4328 -1.8 -1.3 conserved hypothetical protein (NCBI ptt file) compare
BT0892 -1.8 -1.9 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT4322 -1.8 -2.4 conserved hypothetical protein, with a diacylglycerol kinase catalytic domain (NCBI ptt file) compare
BT4003 -1.8 -2.9 stationary-phase survival protein SurE (NCBI ptt file) compare
BT0887 -1.8 -2.0 conserved hypothetical protein (NCBI ptt file) compare
BT0811 -1.8 -3.2 putative tRNA/rRNA methyltransferase (NCBI ptt file) compare
BT1944 -1.8 -2.6 putative transposase (NCBI ptt file) compare
BT1148 -1.7 -2.8 putative NADH dehydrogenase/NAD(P)H nitroreductase (NCBI ptt file) compare
BT4778 -1.7 -3.3 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT4305 -1.7 -8.2 putative alpha-amylase (NCBI ptt file) compare
BT1520 -1.7 -2.3 putative transcriptional regulator (NCBI ptt file) compare
BT3220 -1.7 -8.3 TPR-repeat-containing protein (NCBI ptt file) compare
BT4206 -1.7 -1.2 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (NCBI ptt file) compare
BT2612 -1.7 -3.9 hypothetical protein (NCBI ptt file) compare
BT0709 -1.7 -3.8 hypothetical protein (NCBI ptt file) compare
BT4264 -1.6 -3.8 putative ion channel (NCBI ptt file) compare
BT1747 -1.6 -6.1 pyruvate-flavodoxin oxidoreductase (NCBI ptt file) compare
BT1296 -1.6 -3.1 V-type ATP synthase subunit I (NCBI ptt file) compare
BT3920 -1.6 -0.9 conserved hypothetical protein (NCBI ptt file) compare
BT0844 -1.6 -0.9 hypothetical protein (NCBI ptt file) compare
BT2057 -1.6 -3.2 hypothetical protein (NCBI ptt file) compare
BT0242 -1.6 -1.9 putative polysaccharide deacetylase (NCBI ptt file) compare
BT0833 -1.6 -1.4 conserved hypothetical protein (NCBI ptt file) compare
BT0572 -1.6 -1.5 conserved hypothetical protein (NCBI ptt file) compare
BT3481 -1.6 -0.9 putative glutaminase A (NCBI ptt file) compare
BT0231 -1.6 -1.7 excisionase (NCBI ptt file) compare
BT1733 -1.6 -4.1 putative phosphoribosylformylglycinamidine synthase (NCBI ptt file) compare
BT0930 -1.6 -2.7 hypothetical protein (NCBI ptt file) compare
BT4303 -1.6 -8.1 glycogen debranching enzyme-related protein (4-alpha-glucanotransferase) (NCBI ptt file) compare
BT0297 -1.6 -3.1 putative outer membrane lipoprotein silC precursor (NCBI ptt file) compare
BT2837 -1.6 -9.7 2-oxoglutarate synthase subunit korB (NCBI ptt file) compare
BT1575 -1.6 -2.1 putative dehydrogenase (NCBI ptt file) compare
BT1267 -1.6 -2.1 outer membrane protein (NCBI ptt file) compare
BT1299 -1.5 -1.8 V-type ATP synthase subunit A (NCBI ptt file) compare
BT0151 -1.5 -1.3 hypothetical protein (NCBI ptt file) compare
BT0429 -1.5 -1.5 indolepyruvate oxidoreductase subunit iorB (NCBI ptt file) compare
BT2787 -1.5 -10.0 GTP-binding elongation factor family protein TypA/BipA (NCBI ptt file) compare
BT3758 -1.5 -3.3 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) compare
BT1835 -1.5 -3.4 biotin synthase (NCBI ptt file) compare
BT4304 -1.5 -8.5 putative glycosyltransferase (NCBI ptt file) compare
BT2122 -1.5 -1.2 lysyl-tRNA synthetase (NCBI ptt file) compare
BT1071 -1.5 -2.2 hypothetical protein (NCBI ptt file) compare
BT0896 -1.5 -1.0 putative patatin-like phospholipase (NCBI ptt file) compare
BT1298 -1.5 -2.7 V-type ATP synthase subunit B (NCBI ptt file) compare
BT1361 -1.5 -4.1 DNA repair protein recN (Recombination protein N) (NCBI ptt file) compare
BT4699 -1.5 -2.7 putative hydrolase, haloacid dehalogenase-like hydrolase (NCBI ptt file) compare
BT1680 -1.5 -1.7 putative NADH dehydrogenase/NAD(P)H nitroreductase (NCBI ptt file) compare
BT3022 -1.5 -1.3 hypothetical protein (NCBI ptt file) compare
BT1740 -1.4 -2.7 hypothetical protein (NCBI ptt file) compare
BT2637 -1.4 -2.5 hypothetical protein (NCBI ptt file) compare
BT4768 -1.4 -2.1 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT4265 -1.4 -1.6 GMP synthase (glutamine-hydrolyzing) (NCBI ptt file) compare
BT0298 -1.4 -1.6 cation efflux system protein (outer membrane protein) (NCBI ptt file) compare
BT0220 -1.4 -1.7 hypothetical protein (NCBI ptt file) compare
BT1112 -1.4 -1.0 transposase (NCBI ptt file) compare
BT1459 -1.4 -4.3 putative two-component system sensor histidine kinase, no kinase domain (NCBI ptt file) compare
BT4598 -1.4 -1.9 hypothetical protein (NCBI ptt file) compare
BT3213 -1.4 -1.0 tRNA pseudouridine synthase B (NCBI ptt file) compare
BT3168 -1.4 -4.0 putative Fe-S oxidoreductase (NCBI ptt file) compare
BT3253 -1.4 -2.6 phosphoribosylamine--glycine ligase (NCBI ptt file) compare
BT4640 -1.4 -4.0 hypothetical protein (NCBI ptt file) compare
BT1222 -1.4 -1.6 6-phosphogluconate dehydrogenase,decarboxylating (NCBI ptt file) compare
BT1589 -1.4 -1.5 hypothetical protein (NCBI ptt file) compare
BT0163 -1.3 -2.5 conserved hypothetical protein (NCBI ptt file) compare
BT0077 -1.3 -1.9 conserved hypothetical protein (NCBI ptt file) compare
BT3730 -1.3 -1.2 putative regulatory protein (NCBI ptt file) compare
BT0647 -1.3 -2.0 thiamine phosphate pyrophosphorylase (NCBI ptt file) compare
BT0177 -1.3 -1.8 hypothetical protein (NCBI ptt file) compare
BT2062 -1.3 -5.4 6-phosphofructokinase (NCBI ptt file) compare
BT1265 -1.3 -2.9 two-component system response regulator (NCBI ptt file) compare
BT1422 -1.3 -1.7 conserved hypothetical protein (NCBI ptt file) compare
BT3428 -1.3 -4.2 hypothetical protein (NCBI ptt file) compare
BT4317 -1.3 -2.3 putative lipoprotein protein (NCBI ptt file) compare
BT0435 -1.3 -3.0 hypothetical protein (NCBI ptt file) compare
BT1951 -1.3 -1.7 Fe3+ ABC transporter, permease protein (NCBI ptt file) compare
BT0921 -1.3 -3.7 conserved hypothetical protein (NCBI ptt file) compare
BT4451 -1.3 -2.4 putative MTA/SAH nucleosidase (NCBI ptt file) compare
BT3894 -1.3 -3.1 putative methyltransferase (NCBI ptt file) compare
BT3193 -1.3 -7.4 putative coenzyme A transferase (NCBI ptt file) compare
BT1945 -1.2 -2.6 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT3194 -1.2 -3.7 hypothetical protein (NCBI ptt file) compare
BT0567 -1.2 -2.3 putative protein involved in barrier function of the cell envelope (NCBI ptt file) compare
BT3405 -1.2 -2.1 conserved hypothetical protein (NCBI ptt file) compare
BT1290 -1.2 -3.3 putrescine transport system permease protein potH (NCBI ptt file) compare
BT2610 -1.2 -3.8 hypothetical protein (NCBI ptt file) compare
BT1069 -1.2 -1.6 conserved hypothetical protein, putative transcriptional regulator (NCBI ptt file) compare
BT0829 -1.2 -3.2 UDP-glucose 6-dehydrogenase (NCBI ptt file) compare
BT1461 -1.2 -2.7 hypothetical protein (NCBI ptt file) compare
BT0121 -1.2 -1.6 transcriptional regulator, ArsR family (NCBI ptt file) compare
BT0405 -1.2 -1.3 hypothetical protein (NCBI ptt file) compare
BT0185 -1.2 -0.8 conserved hypothetical protein (NCBI ptt file) compare
BT1104 -1.2 -0.5 small heat shock protein (NCBI ptt file) compare
BT1169 -1.2 -1.4 hypothetical protein (NCBI ptt file) compare
BT1276 -1.2 -2.2 L-fucose mutarotase FucU (EC 5.1.3.29) (from data) compare
BT2280 -1.2 -1.6 hypothetical protein (NCBI ptt file) compare
BT3223 -1.2 -2.6 hypothetical protein (NCBI ptt file) compare
BT1070 -1.2 -2.3 conserved hypothetical protein (NCBI ptt file) compare
BT2686 -1.2 -6.5 putative cation efflux transporter (NCBI ptt file) compare
BT0100 -1.2 -1.5 hypothetical protein (NCBI ptt file) compare
BT1252 -1.2 -2.9 hypothetical protein (NCBI ptt file) compare
BT0549 -1.2 -1.7 putative thioredoxin (NCBI ptt file) compare
BT0800 -1.2 -2.4 conserved hypothetical protein (NCBI ptt file) compare
BT3729 -1.2 -3.1 putative protoporphyrinogen oxidase (NCBI ptt file) compare
BT1894 -1.2 -4.5 TPR-repeat-containing proteins (NCBI ptt file) compare
BT2929 -1.2 -1.2 putative non-specific DNA-binding protein (NCBI ptt file) compare
BT0937 -1.2 -1.3 hypothetical protein (NCBI ptt file) compare
BT2853 -1.2 -0.9 hypothetical protein (NCBI ptt file) compare
BT4332 -1.2 -3.1 conserved hypothetical protein (NCBI ptt file) compare
BT1613 -1.2 -4.5 conserved hypothetical protein (NCBI ptt file) compare
BT4638 -1.2 -3.1 conserved hypothetical protein (NCBI ptt file) compare
BT0746 -1.2 -2.5 putative zinc protease (NCBI ptt file) compare
BT0337 -1.2 -1.7 conserved hypothetical protein (NCBI ptt file) compare
BT3843 -1.2 -2.6 ATP-dependent Clp protease ATP-binding subunit (NCBI ptt file) compare
BT1470 -1.2 -1.4 putative two-component system sensor histidine kinase (NCBI ptt file) compare
BT4776 -1.2 -3.0 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT2021 -1.2 -3.1 conserved hypothetical protein, putative non-specific DNA-binding protein (NCBI ptt file) compare
BT4762 -1.2 -2.0 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0475 -1.1 -1.5 putative phosphoheptose isomerase (NCBI ptt file) compare
BT1737 -1.1 -4.6 conserved hypothetical protein, putative secreted protein (NCBI ptt file) compare
BT3317 -1.1 -2.7 conserved hypothetical protein (NCBI ptt file) compare
BT3363 -1.1 -1.1 lipopolysaccharide core biosynthesis protein LpsA (NCBI ptt file) compare
BT3845 -1.1 -1.5 inosine-5'-monophosphate dehydrogenase (NCBI ptt file) compare
BT1161 -1.1 -2.6 putative aminopeptidase C (NCBI ptt file) compare
BT1898 -1.1 -5.1 hypothetical protein (NCBI ptt file) compare
BT3075 -1.1 -4.9 NAD-dependent epimerase/dehydratase family protein (NCBI ptt file) compare
BT1746 -1.1 -0.9 conserved hypothetical protein (NCBI ptt file) compare
BT3889 -1.1 -4.3 subtilisin-like serine proteases (NCBI ptt file) compare
BT3264 -1.1 -2.7 conserved hypothetical protein (NCBI ptt file) compare
BT2687 -1.1 -3.4 cation efflux system protein (NCBI ptt file) compare
BT4501 -1.1 -2.3 ribosomal large subunit pseudouridine synthase A (NCBI ptt file) compare
BT4571 -1.1 -1.3 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1363 -1.1 -1.1 DNA Pol III Epsilon Chain (NCBI ptt file) compare
BT1329 -1.1 -2.1 putative thiol peroxidase (NCBI ptt file) compare
BT4612 -1.1 -4.6 conserved hypothetical protein (NCBI ptt file) compare
BT1410 -1.1 -3.1 putative metallo-beta-lactamase (NCBI ptt file) compare
BT2815 -1.1 -1.7 putative mutT family protein (NCBI ptt file) compare
BT0173 -1.1 -1.6 conserved hypothetical protein (NCBI ptt file) compare
BT0560 -1.1 -1.7 outer membrane efflux protein (NCBI ptt file) compare
BT3694 -1.1 -0.7 glycosyltransferase (NCBI ptt file) compare
BT4563 -1.1 -1.3 hypothetical protein (NCBI ptt file) compare
BT4649 -1.1 -0.8 hypothetical protein (NCBI ptt file) compare
BT2299 -1.1 -1.3 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0667 -1.0 -2.6 signal peptidase I (SPase I) (NCBI ptt file) compare
BT0913 -1.0 -2.3 putative Fe-S oxidoreductase (NCBI ptt file) compare
BT3443 -1.0 -1.5 conserved hypothetical protein with a conserved domain (NCBI ptt file) compare
BT1313 -1.0 -1.5 muconate cycloisomerase (NCBI ptt file) compare
BT1834 -1.0 -3.3 putative hydrogenase (NCBI ptt file) compare
BT4027 -1.0 -1.0 hypothetical protein (NCBI ptt file) compare
BT2742 -1.0 -1.2 integrase, site-specific recombinase (NCBI ptt file) compare
BT2685 -1.0 -2.3 hypothetical protein (NCBI ptt file) compare
BT1061 -1.0 -2.3 hypothetical protein (NCBI ptt file) compare
BT3071 -1.0 -3.1 conserved hypothetical protein (NCBI ptt file) compare
BT1295 -1.0 -0.7 V-type sodium ATP synthase subunit K (NCBI ptt file) compare
BT0208 -1.0 -1.5 hypothetical protein (NCBI ptt file) compare
BT0693 -1.0 -2.7 hypothetical protein (NCBI ptt file) compare
BT1242 -1.0 -2.1 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT2184 -1.0 -2.5 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
p5482_37 -1.0 -2.4 hypothetical protein (NCBI) compare
BT4064 -1.0 -2.8 NADH dehydrogenase I, chain H (NCBI ptt file) compare
BT0055 -1.0 -2.3 putative glycosyltransferase (NCBI ptt file) compare
BT2546 -1.0 -3.6 transcriptional regulator (NCBI ptt file) compare
BT1557 -1.0 -1.1 hypothetical protein (NCBI ptt file) compare
BT3487 -1.0 -4.1 arylsulfatase (aryl-sulfate sulphohydrolase) (NCBI ptt file) compare
BT3485 -1.0 -4.5 hypothetical protein (NCBI ptt file) compare
BT0679 -1.0 -2.5 cation efflux system protein czcB (NCBI ptt file) compare
BT4046 -1.0 -1.2 conserved hypothetical protein (NCBI ptt file) compare
BT0846 -1.0 -1.7 hypothetical protein (NCBI ptt file) compare
BT2093 -1.0 -1.2 hypothetical protein (NCBI ptt file) compare
BT3737 -1.0 -1.1 hypothetical protein (NCBI ptt file) compare
BT1982 -1.0 -1.5 hypothetical protein (NCBI ptt file) compare
BT0216 -1.0 -1.9 putative rubrerythrin (NCBI ptt file) compare
BT2542 -1.0 -2.0 putative haloacid dehalogenase-like hydrolase (NCBI ptt file) compare
BT3127 -1.0 -3.3 conserved hypothetical protein (NCBI ptt file) compare


Specific Phenotypes

None in this experiment

For Bacteroides thetaiotaomicron VPI-5482 in stress experiments

For stress Lithocholic acid across organisms