Experiment set11IT037 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with 2,5-Dihydroxybenzoic Acid 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_1556 -3.9 -3.8 hypothetical protein compare
Psyr_4340 -3.4 -10.0 phosphomethylpyrimidine kinase, putative compare
Psyr_4740 -3.2 -6.8 thiazole-phosphate synthase compare
Psyr_4203 -3.2 -3.1 SsrA-binding protein compare
Psyr_1544 -3.1 -5.0 SirA-like protein compare
Psyr_1613 -3.0 -5.6 septum site-determining protein MinC compare
Psyr_0951 -2.9 -4.0 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4991 -2.8 -3.8 hypothetical protein compare
Psyr_1663 -2.7 -4.0 phosphoribosylanthranilate isomerase compare
Psyr_0454 -2.6 -6.0 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_3008 -2.6 -6.3 Undecaprenyl-diphosphatase compare
Psyr_4684 -2.6 -4.0 biotin synthesis protein BioC compare
Psyr_4687 -2.6 -8.0 biotin synthase compare
Psyr_0849 -2.5 -10.9 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_4341 -2.5 -6.2 thiamine-phosphate diphosphorylase compare
Psyr_0255 -2.3 -3.0 glutamate-cysteine ligase compare
Psyr_4580 -2.2 -3.3 anthranilate phosphoribosyltransferase compare
Psyr_1408 -2.2 -3.1 Holliday junction endonuclease RuvC compare
Psyr_0383 -2.1 -2.1 Twin-arginine translocation protein TatB compare
Psyr_4683 -2.1 -5.1 dethiobiotin synthase compare
Psyr_4686 -2.0 -6.4 8-amino-7-oxononanoate synthase compare
Psyr_4581 -2.0 -2.4 anthranilate synthase, component II compare
Psyr_5132 -2.0 -4.2 Glucose-inhibited division protein A subfamily compare
Psyr_0918 -1.9 -11.7 ABC transporter compare
Psyr_3886 -1.9 -2.1 methionyl-tRNA synthetase compare
Psyr_4091 -1.8 -3.9 8-oxo-dGTPase compare
Psyr_0574 -1.8 -5.9 protease FtsH subunit HflK compare
Psyr_0917 -1.7 -9.3 ABC-2 compare
Psyr_1404 -1.7 -8.3 Ferritin and Dps compare
Psyr_3954 -1.6 -5.8 GTP-binding protein LepA compare
Psyr_3013 -1.5 -1.9 magnesium chelatase subunit ChlD compare
Psyr_1748 -1.5 -4.4 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_4884 -1.4 -5.3 Rhodanese-like protein compare
Psyr_3806 -1.4 -5.6 hypothetical protein compare
Psyr_1907 -1.4 -3.1 GTP cyclohydrolase I compare
Psyr_3581 -1.3 -5.7 ribosomal large subunit pseudouridine synthase B compare
Psyr_0281 -1.3 -4.0 ABC transporter compare
Psyr_0826 -1.2 -5.8 glucose-6-phosphate isomerase compare
Psyr_4089 -1.2 -5.2 PAS compare
Psyr_1832 -1.2 -2.4 Exonuclease compare
Psyr_0259 -1.2 -2.6 Osmolarity sensor protein envZ compare
Psyr_0487 -1.2 -2.6 glutathione synthase compare
Psyr_0475 -1.2 -2.0 Protein of unknown function YGGT compare
Psyr_1410 -1.2 -3.7 Holliday junction DNA helicase RuvB compare
Psyr_2855 -1.1 -3.7 methionine synthase (B12-independent) compare
Psyr_3199 -1.1 -2.7 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_0565 -1.1 -4.7 Protein of unknown function UPF0126 compare
Psyr_1747 -1.1 -3.7 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_1017 -1.1 -2.0 type III effector HopJ1 compare
Psyr_0575 -1.1 -3.1 protease FtsH subunit HflC compare
Psyr_2990 -1.1 -2.8 conserved hypothetical protein compare
Psyr_4822 -1.1 -2.3 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_4519 -1.1 -6.3 General substrate transporter:Major facilitator superfamily compare
Psyr_3808 -1.0 -1.0 hypothetical protein compare
Psyr_0215 -1.0 -6.9 Exodeoxyribonuclease III xth compare
Psyr_0535 -1.0 -2.2 toluene tolerance protein, putative compare
Psyr_2462 -1.0 -3.1 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_3854 -1.0 -1.5 OmpA/MotB compare
Psyr_4673 -1.0 -2.4 Coenzyme PQQ synthesis D compare
Psyr_2739 -1.0 -2.8 ThiJ/PfpI compare
Psyr_1667 -1.0 -3.2 Colicin V production protein compare
Psyr_1930 -1.0 -3.0 hypothetical protein compare
Psyr_1236 -0.9 -3.1 transcriptional regulator, BadM/Rrf2 family compare
Psyr_1864 -0.9 -2.9 spermidine synthase compare
Psyr_3807 -0.9 -3.9 hypothetical protein compare
Psyr_2769 -0.9 -2.6 conserved hypothetical protein compare
Psyr_2770 -0.9 -3.6 tail fiber domain protein compare
Psyr_RNA61 -0.9 -1.8 tRNA-Gly compare
Psyr_2628 -0.9 -3.0 ABC transporter compare
Psyr_2471 -0.9 -1.5 hydroxymethylglutaryl-CoA lyase compare
Psyr_4622 -0.9 -3.6 Nucleotidyl transferase compare
Psyr_1751 -0.9 -2.8 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_2778 -0.9 -2.4 Phage minor tail protein L compare
Psyr_3620 -0.9 -1.3 hypothetical protein compare
Psyr_0282 -0.9 -3.5 Binding-protein-dependent transport systems inner membrane component compare
Psyr_4470 -0.9 -3.0 ABC transporter compare
Psyr_2160 -0.9 -2.5 cold-shock DNA-binding protein family compare
Psyr_2346 -0.9 -3.1 conserved hypothetical protein compare
Psyr_2641 -0.8 -2.4 hypothetical protein compare
Psyr_2594 -0.8 -1.3 unknown conserved protein in bacilli compare
Psyr_1718 -0.8 -2.3 von Willebrand factor, type A compare
Psyr_2664 -0.8 -3.7 hypothetical protein compare
Psyr_2848 -0.8 -2.6 hypothetical protein compare
Psyr_1934 -0.8 -3.6 conserved hypothetical protein compare
Psyr_3084 -0.8 -2.9 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_3616 -0.8 -4.9 Heat shock protein, Metallo peptidase, MEROPS family M48B compare
Psyr_1505 -0.8 -2.4 Protein of unknown function DUF156 compare
Psyr_0014 -0.8 -2.3 lipid A biosynthesis acyltransferase compare
Psyr_0529 -0.8 -2.3 Glycosyl transferase, group 1 compare
Psyr_1357 -0.8 -1.8 RNase HII compare
Psyr_0531 -0.8 -1.3 LmbE-like protein compare
Psyr_2820 -0.8 -2.0 RecT protein compare
Psyr_0490 -0.8 -3.9 CheW-like protein compare
Psyr_1418 -0.8 -2.2 Radical SAM compare
Psyr_2593 -0.8 -2.4 ABC transporter compare
Psyr_3419 -0.8 -2.9 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_0201 -0.8 -4.1 ATP-dependent DNA helicase RecG compare
Psyr_3466 -0.8 -1.8 Flagellin, C-terminal:Flagellin, N-terminal compare
Psyr_0699 -0.8 -2.4 CDS compare
Psyr_2347 -0.8 -1.2 hypothetical protein compare
Psyr_1268 -0.7 -3.8 extracellular solute-binding protein, family 3:SLT compare
Psyr_5129 -0.7 -3.0 chromosome segregation DNA-binding protein compare
Psyr_1806 -0.7 -2.3 Ureidoglycolate hydrolase compare
Psyr_2312 -0.7 -1.2 Protein of unknown function DUF24 compare
Psyr_3906 -0.7 -1.8 regulatory protein, DeoR compare
Psyr_4350 -0.7 -1.5 Protein of unknown function DUF218 compare
Psyr_1378 -0.7 -1.5 RecA protein compare
Psyr_1461 -0.7 -4.1 hypothetical protein compare
Psyr_1946 -0.7 -1.3 diaminobutyrate aminotransferase apoenzyme compare
Psyr_2095 -0.7 -3.0 Conserved TM helix compare
Psyr_0927 -0.7 -2.0 hypothetical protein compare
Psyr_0347 -0.7 -2.4 hypothetical protein compare
Psyr_0493 -0.7 -2.5 CheW-like protein compare
Psyr_4512 -0.7 -3.6 putative phage-related protein compare
Psyr_2973 -0.7 -1.4 Glyoxalase I compare
Psyr_2151 -0.7 -1.3 monosaccharide ABC transporter substrate-binding protein, CUT2 family compare
Psyr_1250 -0.7 -2.2 conserved hypothetical protein compare
Psyr_1935 -0.7 -2.7 Protein of unknown function DUF796 compare
Psyr_3208 -0.7 -1.7 NADH dehydrogenase subunit M compare
Psyr_0579 -0.7 -5.1 RNAse R compare
Psyr_2071 -0.7 -0.8 outer membrane lipoprotein OprI compare
Psyr_3293 -0.7 -0.8 UspA compare
Psyr_3450 -0.7 -2.5 Hpt compare
Psyr_2398 -0.7 -2.1 ABC transporter compare
Psyr_1419 -0.7 -1.9 preQ(0) biosynthesis protein QueC compare
Psyr_1975 -0.7 -1.3 Integrase, catalytic region compare
Psyr_0724 -0.7 -1.9 conserved hypothetical protein compare
Psyr_2345 -0.7 -2.7 ea59 protein compare
Psyr_1371 -0.7 -3.8 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_4361 -0.7 -1.9 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 compare
Psyr_3640 -0.7 -1.3 conserved hypothetical protein compare
Psyr_3282 -0.7 -3.2 transcriptional regulator, TetR family compare
Psyr_0053 -0.7 -2.4 conserved hypothetical protein compare
Psyr_1783 -0.7 -1.6 CDS compare
Psyr_1373 -0.7 -1.5 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_3290 -0.7 -1.9 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_0844 -0.6 -2.3 Protein of unknown function DUF446 compare
Psyr_2980 -0.6 -1.9 UDP-glucose pyrophosphorylase compare
Psyr_2112 -0.6 -0.9 Protein with unknown function DUF469 compare
Psyr_0919 -0.6 -4.2 Chromosome segregation ATPase-like protein compare
Psyr_2320 -0.6 -3.3 YD repeat protein compare
Psyr_0034 -0.6 -0.8 tryptophan synthase, beta chain compare
Psyr_3727 -0.6 -3.1 conserved hypothetical protein compare
Psyr_2285 -0.6 -1.5 Twin-arginine translocation pathway signal compare
Psyr_2397 -0.6 -1.6 transcriptional regulator, LysR family compare
Psyr_4627 -0.6 -1.6 dimethyladenosine transferase compare
Psyr_1885 -0.6 -0.9 hypothetical protein compare
Psyr_1791 -0.6 -1.9 HAD-superfamily hydrolase, subfamily IA, variant 2 compare
Psyr_3164 -0.6 -3.4 Protein of unknown function UPF0005 compare
Psyr_0033 -0.6 -0.8 tryptophan synthase, alpha chain compare
Psyr_2221 -0.6 -1.3 sarcosine oxidase, gamma subunit compare
Psyr_0268 -0.6 -1.7 DSBA oxidoreductase compare
Psyr_1350 -0.6 -1.4 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_3213 -0.6 -1.5 Propeptide, PepSY amd peptidase M4 compare
Psyr_0920 -0.6 -5.4 Glycosyl transferase, group 1 compare
Psyr_3179 -0.6 -1.2 DNA translocase FtsK compare
Psyr_0491 -0.6 -1.8 chemotaxis sensory transducer compare
Psyr_4908 -0.6 -2.6 conserved hypothetical protein compare
Psyr_3020 -0.6 -1.1 precorrin-4 C11-methyltransferase compare
Psyr_4833 -0.6 -1.8 histidine ammonia-lyase compare
Psyr_4362 -0.6 -1.8 Rare lipoprotein A compare
Psyr_4598 -0.6 -2.3 lipoprotein, putative compare
Psyr_2520 -0.6 -1.1 SOS-response transcriptional repressor, LexA compare
Psyr_3088 -0.6 -1.8 Glycosyl transferase, group 1 compare
Psyr_2645 -0.6 -2.6 hypothetical protein compare
Psyr_0916 -0.6 -3.6 GDP-mannose 4,6-dehydratase compare
Psyr_2171 -0.6 -1.1 HpcH/HpaI aldolase compare
Psyr_0270 -0.6 -2.5 DNA polymerase I compare
Psyr_3900 -0.6 -1.6 conserved hypothetical protein compare
Psyr_4136 -0.6 -1.1 BolA-like protein compare
Psyr_2947 -0.6 -2.5 hypothetical protein compare
Psyr_0202 -0.6 -3.1 transcriptional regulator, LysR family compare
Psyr_2642 -0.6 -1.9 hypothetical protein compare
Psyr_3677 -0.6 -2.0 Aminotransferase, class I and II compare
Psyr_3257 -0.6 -1.9 multisubunit potassium/proton antiporter, PhaG subunit compare
Psyr_4609 -0.6 -4.3 anthranilate synthase, component I compare
Psyr_1460 -0.6 -2.3 hypothetical protein compare
Psyr_3034 -0.6 -2.1 conserved hypothetical protein compare
Psyr_0174 -0.6 -2.9 Sodium:dicarboxylate symporter compare
Psyr_1588 -0.6 -1.8 Putative exonuclease, RdgC compare
Psyr_2899 -0.6 -2.1 conserved hypothetical protein compare
Psyr_1123 -0.6 -1.8 conserved hypothetical protein compare
Psyr_2868 -0.6 -2.0 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_1286 -0.6 -3.2 tyrosine recombinase XerD subunit compare
Psyr_4813 -0.6 -1.8 Short-chain dehydrogenase/reductase SDR compare
Psyr_2802 -0.6 -1.6 lipoprotein, putative compare
Psyr_3637 -0.6 -4.3 Glycosyl transferase, family 4 compare
Psyr_2601 -0.6 -3.2 regulatory protein, LuxR compare
Psyr_2804 -0.6 -1.5 hypothetical protein compare
Psyr_4093 -0.6 -2.0 glutamate N-acetyltransferase compare
Psyr_5130 -0.6 -3.4 chromosome segregation ATPase compare
Psyr_2327 -0.6 -1.1 GTP cyclohydrolase subunit MoaA compare
Psyr_0466 -0.5 -2.5 3-hydroxyisobutyrate dehydrogenase compare
Psyr_2321 -0.5 -3.0 YD repeat protein compare
Psyr_1417 -0.5 -2.1 TPR repeat protein compare
Psyr_0492 -0.5 -3.9 Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt compare
Psyr_1555 -0.5 -1.6 Cobyrinic acid a,c-diamide synthase compare
Psyr_0099 -0.5 -0.7 Conserved hypothetical protein compare
Psyr_0395 -0.5 -1.9 HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B compare
Psyr_3720 -0.5 -2.8 Filamentation induced by cAMP protein Fic compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress 2,5-dihydroxybenzoic acid across organisms