Experiment set11IT030 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Arecoline Hydrobromide 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_1544 -4.2 -4.1 SirA-like protein compare
Psyr_0951 -3.9 -4.6 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_1613 -3.7 -5.0 septum site-determining protein MinC compare
Psyr_4683 -3.6 -4.2 dethiobiotin synthase compare
Psyr_4203 -3.6 -2.5 SsrA-binding protein compare
Psyr_4340 -3.4 -9.9 phosphomethylpyrimidine kinase, putative compare
Psyr_3008 -3.4 -9.1 Undecaprenyl-diphosphatase compare
Psyr_4684 -3.0 -4.0 biotin synthesis protein BioC compare
Psyr_0383 -2.9 -2.9 Twin-arginine translocation protein TatB compare
Psyr_4740 -2.8 -6.9 thiazole-phosphate synthase compare
Psyr_4341 -2.8 -8.6 thiamine-phosphate diphosphorylase compare
Psyr_4686 -2.8 -6.6 8-amino-7-oxononanoate synthase compare
Psyr_4580 -2.8 -3.7 anthranilate phosphoribosyltransferase compare
Psyr_1663 -2.5 -4.1 phosphoribosylanthranilate isomerase compare
Psyr_4687 -2.5 -7.8 biotin synthase compare
Psyr_1556 -2.5 -3.6 hypothetical protein compare
Psyr_0849 -2.4 -10.7 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_0454 -2.4 -6.1 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_3808 -2.3 -1.8 hypothetical protein compare
Psyr_5132 -2.2 -3.5 Glucose-inhibited division protein A subfamily compare
Psyr_0918 -2.0 -12.6 ABC transporter compare
Psyr_0574 -2.0 -5.6 protease FtsH subunit HflK compare
Psyr_4091 -1.9 -4.3 8-oxo-dGTPase compare
Psyr_0917 -1.8 -9.9 ABC-2 compare
Psyr_0475 -1.8 -2.7 Protein of unknown function YGGT compare
Psyr_1688 -1.8 -3.1 Protein of unknown function DUF1315 compare
Psyr_0487 -1.7 -3.0 glutathione synthase compare
Psyr_0281 -1.6 -3.7 ABC transporter compare
Psyr_1907 -1.5 -3.6 GTP cyclohydrolase I compare
Psyr_2642 -1.5 -3.5 hypothetical protein compare
Psyr_1212 -1.5 -3.5 type III secretion protein HrpO compare
Psyr_0565 -1.4 -5.5 Protein of unknown function UPF0126 compare
Psyr_4884 -1.4 -5.0 Rhodanese-like protein compare
Psyr_4991 -1.4 -2.5 hypothetical protein compare
Psyr_4581 -1.4 -2.1 anthranilate synthase, component II compare
Psyr_2848 -1.4 -4.2 hypothetical protein compare
Psyr_4634 -1.4 -2.1 Polynucleotide adenylyltransferase:Metal-dependent phosphohydrolase, HD subdomain protein compare
Psyr_1408 -1.3 -3.0 Holliday junction endonuclease RuvC compare
Psyr_3581 -1.3 -5.0 ribosomal large subunit pseudouridine synthase B compare
Psyr_0255 -1.3 -2.4 glutamate-cysteine ligase compare
Psyr_4136 -1.3 -2.7 BolA-like protein compare
Psyr_2143 -1.3 -1.7 delta1-piperideine 2-carboxylate reductase compare
Psyr_1930 -1.3 -3.5 hypothetical protein compare
Psyr_1555 -1.3 -4.6 Cobyrinic acid a,c-diamide synthase compare
Psyr_1350 -1.3 -2.9 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_2973 -1.2 -2.7 Glyoxalase I compare
Psyr_0529 -1.2 -3.5 Glycosyl transferase, group 1 compare
Psyr_2980 -1.2 -2.7 UDP-glucose pyrophosphorylase compare
Psyr_4627 -1.2 -2.3 dimethyladenosine transferase compare
Psyr_4362 -1.2 -2.6 Rare lipoprotein A compare
Psyr_5133 -1.2 -3.4 tRNA modification GTPase trmE compare
Psyr_4874 -1.2 -1.5 ABC transporter compare
Psyr_4786 -1.1 -2.2 hypothetical protein compare
Psyr_0444 -1.1 -1.6 Malonate decarboxylase delta subunit compare
Psyr_4822 -1.1 -2.1 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_1505 -1.1 -2.1 Protein of unknown function DUF156 compare
Psyr_2285 -1.1 -1.9 Twin-arginine translocation pathway signal compare
Psyr_0034 -1.1 -1.0 tryptophan synthase, beta chain compare
Psyr_3954 -1.1 -4.6 GTP-binding protein LepA compare
Psyr_1373 -1.1 -2.5 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_2641 -1.1 -2.2 hypothetical protein compare
Psyr_0282 -1.1 -4.5 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1615 -1.1 -3.8 Patatin compare
Psyr_1748 -1.1 -4.1 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_0826 -1.1 -5.0 glucose-6-phosphate isomerase compare
Psyr_3806 -1.0 -3.7 hypothetical protein compare
Psyr_3287 -1.0 -1.9 DNA topoisomerase I compare
Psyr_3805 -1.0 -1.9 hypothetical protein compare
Psyr_0493 -1.0 -2.5 CheW-like protein compare
Psyr_0215 -1.0 -6.7 Exodeoxyribonuclease III xth compare
Psyr_2739 -1.0 -3.5 ThiJ/PfpI compare
Psyr_1097 -1.0 -1.9 glycine cleavage system H protein compare
Psyr_0014 -1.0 -2.7 lipid A biosynthesis acyltransferase compare
Psyr_1885 -1.0 -1.4 hypothetical protein compare
Psyr_1410 -1.0 -3.0 Holliday junction DNA helicase RuvB compare
Psyr_3807 -0.9 -3.5 hypothetical protein compare
Psyr_2854 -0.9 -3.3 conserved hypothetical protein compare
Psyr_1667 -0.9 -3.6 Colicin V production protein compare
Psyr_4754 -0.9 -2.0 16S rRNA m(2)G-966 methyltransferase compare
Psyr_3665 -0.9 -2.9 conserved hypothetical protein compare
Psyr_1460 -0.9 -3.1 hypothetical protein compare
Psyr_3013 -0.9 -1.4 magnesium chelatase subunit ChlD compare
Psyr_2406 -0.9 -2.0 Flavin reductase-like protein compare
Psyr_4138 -0.9 -3.2 Toluene tolerance compare
Psyr_5029 -0.9 -1.5 Rubredoxin-type Fe(Cys)4 protein compare
Psyr_3886 -0.9 -1.6 methionyl-tRNA synthetase compare
Psyr_2348 -0.9 -1.7 hypothetical protein compare
Psyr_4089 -0.9 -3.9 PAS compare
Psyr_1975 -0.9 -2.0 Integrase, catalytic region compare
Psyr_0724 -0.9 -2.0 conserved hypothetical protein compare
Psyr_0575 -0.9 -2.0 protease FtsH subunit HflC compare
Psyr_1268 -0.9 -4.4 extracellular solute-binding protein, family 3:SLT compare
Psyr_4051 -0.8 -1.8 transcriptional regulator, ArsR family compare
Psyr_2347 -0.8 -1.3 hypothetical protein compare
Psyr_1245 -0.8 -4.3 23S rRNA m(2)A-2503 methyltransferase compare
Psyr_2769 -0.8 -2.6 conserved hypothetical protein compare
Psyr_0524 -0.8 -2.4 Lipopolysaccharide kinase compare
Psyr_0268 -0.8 -1.9 DSBA oxidoreductase compare
Psyr_4057 -0.8 -1.9 regulatory protein, LysR:LysR, substrate-binding protein compare
Psyr_3952 -0.8 -1.9 conserved hypothetical protein compare
Psyr_0498 -0.8 -2.9 Protein of unknown function DUF1445 compare
Psyr_4519 -0.8 -4.5 General substrate transporter:Major facilitator superfamily compare
Psyr_4350 -0.8 -2.5 Protein of unknown function DUF218 compare
Psyr_2462 -0.8 -2.2 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_1747 -0.8 -2.6 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_3854 -0.8 -1.3 OmpA/MotB compare
Psyr_3702 -0.8 -2.0 Arsenate reductase compare
Psyr_2292 -0.8 -1.7 L-glutaminase compare
Psyr_4893 -0.8 -1.6 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_2039 -0.8 -1.8 Fimbrial protein compare
Psyr_1832 -0.8 -2.3 Exonuclease compare
Psyr_1806 -0.8 -2.4 Ureidoglycolate hydrolase compare
Psyr_2930 -0.8 -1.8 Glyoxalase/bleomycin resistance protein/dioxygenase compare
Psyr_0033 -0.8 -0.7 tryptophan synthase, alpha chain compare
Psyr_3793 -0.8 -2.6 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_3193 -0.8 -1.6 Transcription factor jumonji, jmjC compare
Psyr_3906 -0.8 -1.1 regulatory protein, DeoR compare
Psyr_3034 -0.8 -2.4 conserved hypothetical protein compare
Psyr_2253 -0.8 -1.5 Phosphonate metabolism compare
Psyr_3152 -0.8 -1.1 hypothetical protein compare
Psyr_1419 -0.7 -1.9 preQ(0) biosynthesis protein QueC compare
Psyr_4460 -0.7 -1.4 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_4470 -0.7 -2.7 ABC transporter compare
Psyr_3084 -0.7 -1.9 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_3179 -0.7 -1.7 DNA translocase FtsK compare
Psyr_0464 -0.7 -1.5 hypothetical protein compare
Psyr_2312 -0.7 -1.2 Protein of unknown function DUF24 compare
Psyr_0919 -0.7 -5.0 Chromosome segregation ATPase-like protein compare
Psyr_0041 -0.7 -2.4 Protein of unknown function DUF1161 compare
Psyr_0259 -0.7 -1.7 Osmolarity sensor protein envZ compare
Psyr_3121 -0.7 -1.6 Protein of unknown function DUF1345 compare
Psyr_2620 -0.7 -1.5 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_0579 -0.7 -5.2 RNAse R compare
Psyr_1227 -0.7 -1.8 Queuosine biosynthesis protein compare
Psyr_2346 -0.7 -2.4 conserved hypothetical protein compare
Psyr_1931 -0.7 -3.1 hypothetical protein compare
Psyr_1121 -0.7 -1.4 6-phosphogluconolactonase compare
Psyr_2602 -0.7 -2.7 transcriptional regulator, LuxR family compare
Psyr_5129 -0.7 -2.5 chromosome segregation DNA-binding protein compare
Psyr_2612 -0.7 -1.9 syrP protein, putative compare
Psyr_1935 -0.7 -1.9 Protein of unknown function DUF796 compare
Psyr_4562 -0.7 -3.5 conserved domain protein compare
Psyr_3755 -0.7 -1.1 conserved hypothetical protein compare
Psyr_0490 -0.7 -3.0 CheW-like protein compare
Psyr_2137 -0.7 -1.1 molybdopterin molybdochelatase compare
Psyr_2899 -0.7 -2.7 conserved hypothetical protein compare
Psyr_1749 -0.7 -3.1 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_2664 -0.7 -3.1 hypothetical protein compare
Psyr_1094 -0.7 -1.6 cold-shock DNA-binding protein family compare
Psyr_2990 -0.7 -2.2 conserved hypothetical protein compare
Psyr_0580 -0.7 -1.8 23S rRNA Gm-2251 2'-O-methyltransferase compare
Psyr_RNA61 -0.7 -1.6 tRNA-Gly compare
Psyr_2593 -0.7 -2.0 ABC transporter compare
Psyr_0923 -0.6 -3.1 hypothetical protein compare
Psyr_0393 -0.6 -2.6 Protein of unknown function DUF971 compare
Psyr_0920 -0.6 -5.5 Glycosyl transferase, group 1 compare
Psyr_0395 -0.6 -2.2 HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B compare
Psyr_3450 -0.6 -2.0 Hpt compare
Psyr_3293 -0.6 -1.3 UspA compare
Psyr_3476 -0.6 -2.0 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_1588 -0.6 -1.7 Putative exonuclease, RdgC compare
Psyr_4566 -0.6 -4.2 Peptidase M23B compare
Psyr_0927 -0.6 -2.0 hypothetical protein compare
Psyr_3104 -0.6 -1.7 phosphate ABC transporter membrane protein 2, PhoT family compare
Psyr_2887 -0.6 -1.2 Endoribonuclease L-PSP compare
Psyr_2154 -0.6 -2.7 transcriptional regulator, LacI family compare
Psyr_5065 -0.6 -3.8 ATP-dependent DNA helicase UvrD compare
Psyr_3720 -0.6 -3.2 Filamentation induced by cAMP protein Fic compare
Psyr_3250 -0.6 -2.1 Helix-turn-helix motif protein compare
Psyr_2591 -0.6 -3.2 transport system permease protein compare
Psyr_1250 -0.6 -2.0 conserved hypothetical protein compare
Psyr_1198 -0.6 -1.5 type III secretion protein HrpF compare
Psyr_4087 -0.6 -0.9 Protein of unknown function DUF520 compare
Psyr_4480 -0.6 -1.5 outer membrane transport energization protein TonB compare
Psyr_2030 -0.6 -1.1 Calcium-binding EF-hand compare
Psyr_1864 -0.6 -2.1 spermidine synthase compare
Psyr_2160 -0.6 -1.5 cold-shock DNA-binding protein family compare
Psyr_1404 -0.6 -3.7 Ferritin and Dps compare
Psyr_2128 -0.6 -1.7 Protein of unknown function DUF6 compare
Psyr_2592 -0.6 -2.3 transport system permease protein compare
Psyr_2264 -0.6 -1.3 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_0959 -0.6 -2.4 Short-chain dehydrogenase/reductase SDR compare
Psyr_4609 -0.6 -4.5 anthranilate synthase, component I compare
Psyr_0638 -0.6 -2.0 Peptidase S16, lon N-terminal compare
Psyr_1458 -0.6 -2.1 hypothetical protein compare
Psyr_2476 -0.6 -1.4 Exodeoxyribonuclease III compare
Psyr_3439 -0.6 -2.4 GTP-binding signal recognition particle SRP54, G-domain protein compare
Psyr_3282 -0.6 -2.6 transcriptional regulator, TetR family compare
Psyr_2105 -0.6 -2.0 conserved hypothetical protein compare
Psyr_2595 -0.6 -2.2 Dimethylmenaquinone methyltransferase compare
Psyr_2071 -0.6 -0.7 outer membrane lipoprotein OprI compare
Psyr_0818 -0.6 -1.7 ampE protein compare
Psyr_1418 -0.6 -1.6 Radical SAM compare
Psyr_2180 -0.6 -1.8 transcriptional regulator, LysR family compare
Psyr_3636 -0.6 -3.8 Polysaccharide biosynthesis protein CapD compare
Psyr_1919 -0.6 -2.2 hypothetical protein compare
Psyr_0025 -0.6 -1.8 shikimate dehydrogenase compare
Psyr_2738 -0.6 -1.8 regulatory protein, LysR compare
Psyr_3198 -0.6 -1.2 NADH dehydrogenase subunit B compare
Psyr_0319 -0.6 -3.1 conserved hypothetical protein compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Arecoline Hydrobromide across organisms