Experiment set11IT029 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Strychnine Sulfate 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_0951 -4.4 -4.2 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_1544 -4.2 -4.0 SirA-like protein compare
Psyr_4091 -3.6 -6.3 8-oxo-dGTPase compare
Psyr_4203 -3.5 -2.4 SsrA-binding protein compare
Psyr_1613 -3.4 -5.2 septum site-determining protein MinC compare
Psyr_4684 -3.4 -3.3 biotin synthesis protein BioC compare
Psyr_0383 -3.4 -3.2 Twin-arginine translocation protein TatB compare
Psyr_4340 -3.3 -9.9 phosphomethylpyrimidine kinase, putative compare
Psyr_4580 -3.3 -3.1 anthranilate phosphoribosyltransferase compare
Psyr_4740 -3.2 -6.1 thiazole-phosphate synthase compare
Psyr_1663 -3.2 -3.1 phosphoribosylanthranilate isomerase compare
Psyr_3008 -3.2 -8.3 Undecaprenyl-diphosphatase compare
Psyr_4687 -3.1 -7.5 biotin synthase compare
Psyr_4683 -3.0 -5.2 dethiobiotin synthase compare
Psyr_4991 -2.9 -3.4 hypothetical protein compare
Psyr_4341 -2.7 -7.4 thiamine-phosphate diphosphorylase compare
Psyr_1556 -2.6 -3.2 hypothetical protein compare
Psyr_0849 -2.4 -10.3 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_0454 -2.2 -5.9 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_0475 -2.2 -3.2 Protein of unknown function YGGT compare
Psyr_4686 -2.2 -6.2 8-amino-7-oxononanoate synthase compare
Psyr_2847 -2.0 -3.3 hypothetical protein compare
Psyr_0918 -2.0 -10.9 ABC transporter compare
Psyr_0917 -1.9 -9.6 ABC-2 compare
Psyr_4754 -1.9 -3.0 16S rRNA m(2)G-966 methyltransferase compare
Psyr_3135 -1.8 -3.1 transcriptional regulator, GntR family compare
Psyr_3293 -1.7 -3.2 UspA compare
Psyr_4822 -1.7 -4.0 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_3199 -1.7 -3.4 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_0574 -1.7 -5.4 protease FtsH subunit HflK compare
Psyr_3287 -1.7 -2.4 DNA topoisomerase I compare
Psyr_4581 -1.6 -2.6 anthranilate synthase, component II compare
Psyr_0259 -1.6 -3.5 Osmolarity sensor protein envZ compare
Psyr_0565 -1.5 -5.9 Protein of unknown function UPF0126 compare
Psyr_4884 -1.5 -4.7 Rhodanese-like protein compare
Psyr_2227 -1.4 -2.8 conserved hypothetical protein compare
Psyr_5133 -1.4 -3.6 tRNA modification GTPase trmE compare
Psyr_5132 -1.3 -3.2 Glucose-inhibited division protein A subfamily compare
Psyr_1419 -1.3 -2.7 preQ(0) biosynthesis protein QueC compare
Psyr_2347 -1.3 -2.4 hypothetical protein compare
Psyr_0493 -1.3 -3.5 CheW-like protein compare
Psyr_3581 -1.3 -4.6 ribosomal large subunit pseudouridine synthase B compare
Psyr_0826 -1.2 -5.5 glucose-6-phosphate isomerase compare
Psyr_1667 -1.2 -4.3 Colicin V production protein compare
Psyr_2617 -1.2 -2.7 Secretion protein HlyD compare
Psyr_4627 -1.2 -2.4 dimethyladenosine transferase compare
Psyr_1410 -1.2 -3.1 Holliday junction DNA helicase RuvB compare
Psyr_1748 -1.2 -4.4 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_0571 -1.2 -3.2 tRNA isopentenyltransferase compare
Psyr_2854 -1.2 -4.0 conserved hypothetical protein compare
Psyr_1212 -1.2 -2.8 type III secretion protein HrpO compare
Psyr_4464 -1.2 -1.6 lipoprotein, putative compare
Psyr_4939 -1.1 -3.6 conserved hypothetical protein compare
Psyr_1930 -1.1 -2.4 hypothetical protein compare
Psyr_4362 -1.1 -2.9 Rare lipoprotein A compare
Psyr_1907 -1.1 -2.1 GTP cyclohydrolase I compare
Psyr_2769 -1.1 -3.9 conserved hypothetical protein compare
Psyr_0575 -1.0 -2.8 protease FtsH subunit HflC compare
Psyr_2855 -1.0 -2.7 methionine synthase (B12-independent) compare
Psyr_3604 -1.0 -3.0 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region compare
Psyr_1555 -1.0 -2.9 Cobyrinic acid a,c-diamide synthase compare
Psyr_4893 -1.0 -2.2 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_3739 -1.0 -2.4 conserved hypothetical protein compare
Psyr_2346 -1.0 -3.0 conserved hypothetical protein compare
Psyr_2590 -1.0 -3.0 Periplasmic binding protein compare
Psyr_0034 -1.0 -1.1 tryptophan synthase, beta chain compare
Psyr_0281 -1.0 -1.7 ABC transporter compare
Psyr_3806 -1.0 -3.5 hypothetical protein compare
Psyr_3202 -1.0 -1.4 NADH dehydrogenase subunit G compare
Psyr_2462 -1.0 -3.5 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_0580 -0.9 -3.0 23S rRNA Gm-2251 2'-O-methyltransferase compare
Psyr_0394 -0.9 -3.6 Heat shock protein HslU compare
Psyr_0487 -0.9 -1.9 glutathione synthase compare
Psyr_1408 -0.9 -2.1 Holliday junction endonuclease RuvC compare
Psyr_4386 -0.9 -3.5 conserved hypothetical protein compare
Psyr_1935 -0.9 -3.5 Protein of unknown function DUF796 compare
Psyr_0215 -0.9 -5.9 Exodeoxyribonuclease III xth compare
Psyr_3954 -0.9 -3.7 GTP-binding protein LepA compare
Psyr_2840 -0.9 -2.9 hypothetical protein compare
Psyr_4140 -0.9 -1.9 Protein of unknown function DUF140 compare
Psyr_1751 -0.9 -3.1 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_2406 -0.9 -1.7 Flavin reductase-like protein compare
Psyr_4100 -0.9 -3.8 D-alanine--D-alanine ligase compare
Psyr_1747 -0.9 -3.1 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_3906 -0.9 -1.9 regulatory protein, DeoR compare
Psyr_1250 -0.9 -2.9 conserved hypothetical protein compare
Psyr_1227 -0.9 -2.3 Queuosine biosynthesis protein compare
Psyr_2264 -0.9 -1.5 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_0491 -0.9 -2.7 chemotaxis sensory transducer compare
Psyr_1749 -0.9 -3.9 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_4634 -0.8 -1.7 Polynucleotide adenylyltransferase:Metal-dependent phosphohydrolase, HD subdomain protein compare
Psyr_3808 -0.8 -0.8 hypothetical protein compare
Psyr_4361 -0.8 -2.6 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 compare
Psyr_1530 -0.8 -1.3 hypothetical protein compare
Psyr_2345 -0.8 -3.4 ea59 protein compare
Psyr_0579 -0.8 -5.4 RNAse R compare
Psyr_2255 -0.8 -1.7 ABC transporter compare
Psyr_2680 -0.8 -2.1 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0923 -0.8 -3.6 hypothetical protein compare
Psyr_1357 -0.8 -1.5 RNase HII compare
Psyr_1094 -0.8 -2.5 cold-shock DNA-binding protein family compare
Psyr_0941 -0.8 -4.3 Conserved hypothetical protein 92 compare
Psyr_1372 -0.8 -2.3 Protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psyr_2642 -0.8 -3.0 hypothetical protein compare
Psyr_4089 -0.8 -3.5 PAS compare
Psyr_4788 -0.8 -1.1 lipoprotein, putative compare
Psyr_1688 -0.8 -1.4 Protein of unknown function DUF1315 compare
Psyr_3702 -0.8 -1.9 Arsenate reductase compare
Psyr_4115 -0.8 -1.5 phosphoheptose isomerase compare
Psyr_2540 -0.8 -1.5 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_4979 -0.8 -3.9 hypothetical protein compare
Psyr_1733 -0.8 -1.3 Peptidyl-prolyl cis-trans isomerase, cyclophilin type compare
Psyr_4609 -0.8 -5.6 anthranilate synthase, component I compare
Psyr_3807 -0.8 -2.8 hypothetical protein compare
Psyr_2641 -0.8 -2.2 hypothetical protein compare
Psyr_2980 -0.7 -2.1 UDP-glucose pyrophosphorylase compare
Psyr_2921 -0.7 -2.0 ADP-ribosylglycohydrolase compare
Psyr_0919 -0.7 -5.0 Chromosome segregation ATPase-like protein compare
Psyr_3644 -0.7 -1.7 prephenate dehydrogenase compare
Psyr_5067 -0.7 -3.2 conserved hypothetical protein compare
Psyr_1404 -0.7 -4.1 Ferritin and Dps compare
Psyr_1268 -0.7 -3.8 extracellular solute-binding protein, family 3:SLT compare
Psyr_2543 -0.7 -1.0 conserved hypothetical protein compare
Psyr_3377 -0.7 -1.9 transcriptional regulator, MarR family compare
Psyr_0549 -0.7 -1.4 Metallophosphoesterase compare
Psyr_2461 -0.7 -1.7 Uncharacterized conserved protein UCP030820 compare
Psyr_2607 -0.7 -3.0 regulatory protein, LuxR compare
Psyr_0081 -0.7 -1.5 ABC transporter compare
Psyr_4519 -0.7 -3.9 General substrate transporter:Major facilitator superfamily compare
Psyr_2481 -0.7 -2.4 thiol peroxidase (atypical 2-Cys peroxiredoxin) compare
Psyr_1378 -0.7 -1.6 RecA protein compare
Psyr_1275 -0.7 -2.0 Protein of unknown function DUF1289 compare
Psyr_5072 -0.7 -1.0 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_1371 -0.7 -3.3 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_1373 -0.7 -1.8 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_1832 -0.7 -1.3 Exonuclease compare
Psyr_4566 -0.7 -4.1 Peptidase M23B compare
Psyr_1588 -0.7 -1.7 Putative exonuclease, RdgC compare
Psyr_2824 -0.7 -2.3 conserved hypothetical protein compare
Psyr_0148 -0.7 -1.7 hypothetical protein compare
Psyr_2848 -0.7 -2.2 hypothetical protein compare
Psyr_2929 -0.7 -2.1 transcriptional regulator, LysR family compare
Psyr_5135 -0.7 -1.1 Protein of unknown function DUF37 compare
Psyr_0239 -0.7 -2.7 cytochrome c5 compare
Psyr_1972 -0.7 -1.8 conserved hypothetical protein compare
Psyr_2899 -0.7 -2.1 conserved hypothetical protein compare
Psyr_1929 -0.7 -2.0 hypothetical protein compare
Psyr_4989 -0.7 -1.5 hypothetical protein compare
Psyr_0916 -0.7 -4.3 GDP-mannose 4,6-dehydratase compare
Psyr_3198 -0.7 -1.4 NADH dehydrogenase subunit B compare
Psyr_3840 -0.7 -2.5 conserved hypothetical protein compare
Psyr_4598 -0.6 -2.2 lipoprotein, putative compare
Psyr_1140 -0.6 -2.0 Disulfide bond formation protein DsbB compare
Psyr_1123 -0.6 -2.4 conserved hypothetical protein compare
Psyr_1783 -0.6 -1.2 CDS compare
Psyr_3152 -0.6 -0.9 hypothetical protein compare
Psyr_4309 -0.6 -3.0 hypothetical protein compare
Psyr_4460 -0.6 -1.3 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_0535 -0.6 -1.8 toluene tolerance protein, putative compare
Psyr_0282 -0.6 -2.2 Binding-protein-dependent transport systems inner membrane component compare
Psyr_4512 -0.6 -3.0 putative phage-related protein compare
Psyr_2160 -0.6 -1.7 cold-shock DNA-binding protein family compare
Psyr_3597 -0.6 -1.0 ABC transporter compare
Psyr_3262 -0.6 -1.2 dnaK suppressor protein, putative compare
Psyr_2060 -0.6 -1.5 Sec-independent protein translocase TatD compare
Psyr_2639 -0.6 -3.3 hypothetical protein compare
Psyr_3084 -0.6 -2.2 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_4978 -0.6 -1.2 hypothetical protein compare
Psyr_1418 -0.6 -1.4 Radical SAM compare
Psyr_2430 -0.6 -2.7 NUDIX hydrolase compare
Psyr_2115 -0.6 -2.1 Response regulator receiver compare
Psyr_2112 -0.6 -1.2 Protein with unknown function DUF469 compare
Psyr_4019 -0.6 -2.3 H-NS family protein MvaT compare
Psyr_0920 -0.6 -5.2 Glycosyl transferase, group 1 compare
Psyr_3040 -0.6 -1.6 conserved hypothetical protein compare
Psyr_3867 -0.6 -1.4 hypothetical protein compare
Psyr_0834 -0.6 -2.5 Glutamyl-tRNA synthetase, class Ic compare
Psyr_2375 -0.6 -1.6 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_0202 -0.6 -3.7 transcriptional regulator, LysR family compare
Psyr_1934 -0.6 -2.6 conserved hypothetical protein compare
Psyr_1975 -0.6 -1.1 Integrase, catalytic region compare
Psyr_3208 -0.6 -1.4 NADH dehydrogenase subunit M compare
Psyr_0680 -0.6 -2.0 DNA helicase/exodeoxyribonuclease V, gamma subunit compare
Psyr_0044 -0.6 -0.9 transferase hexapeptide repeat protein compare
Psyr_3427 -0.6 -1.0 conserved hypothetical protein compare
Psyr_0550 -0.6 -2.5 Protein of unknown function UPF0227 compare
Psyr_3164 -0.6 -3.5 Protein of unknown function UPF0005 compare
Psyr_3282 -0.6 -2.4 transcriptional regulator, TetR family compare
Psyr_0318 -0.6 -2.6 cell division protein ZapA compare
Psyr_3934 -0.6 -1.3 Short-chain dehydrogenase/reductase SDR compare
Psyr_2738 -0.6 -2.4 regulatory protein, LysR compare
Psyr_2339 -0.6 -1.4 hypothetical protein compare
Psyr_3294 -0.6 -2.4 ABC transporter compare
Psyr_2202 -0.6 -1.1 ABC transporter compare
Psyr_1245 -0.6 -2.6 23S rRNA m(2)A-2503 methyltransferase compare
Psyr_4155 -0.6 -1.1 Protein of unknown function DUF615 compare
Psyr_3180 -0.6 -2.3 Leucyl/phenylalanyl-tRNA--protein transferase compare
Psyr_0174 -0.6 -3.5 Sodium:dicarboxylate symporter compare
Psyr_3323 -0.6 -1.6 conserved hypothetical protein compare
Psyr_2104 -0.6 -3.1 Response regulator receiver:ANTAR compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Strychnine Sulfate across organisms