Experiment set11IT029 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Strychnine Sulfate 10 mM

200 most detrimental genes:

  gene name fitness t score description  
Psyr_3692 +1.0 1.8 conserved hypothetical protein compare
Psyr_2733 +1.0 2.0 Short-chain dehydrogenase/reductase SDR compare
Psyr_4224 +1.0 1.8 conserved hypothetical protein compare
Psyr_3459 +0.9 2.5 Helix-turn-helix, Fis-type compare
Psyr_2806 +0.9 3.0 Bacteriophage Lambda NinG compare
Psyr_3681 +0.8 1.6 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
Psyr_4143 +0.8 2.0 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI compare
Psyr_0435 +0.8 2.0 membrane protein, putative compare
Psyr_3755 +0.8 1.9 conserved hypothetical protein compare
Psyr_1678 +0.8 1.4 Hypothetical protein compare
Psyr_1633 +0.8 1.4 MotA/TolQ/ExbB proton channel compare
Psyr_0885 +0.8 1.4 conserved hypothetical protein compare
Psyr_0437 +0.7 2.0 acyl carrier protein, putative compare
Psyr_2057 +0.7 2.5 acyl-CoA thioesterase II, putative compare
Psyr_2340 +0.7 2.7 Peptidylprolyl isomerase, FKBP-type compare
Psyr_3004 +0.7 2.1 transcriptional regulator, LysR family compare
Psyr_2337 +0.7 1.2 conserved hypothetical protein compare
Psyr_2922 +0.7 3.8 Permease for cytosine/purines, uracil, thiamine, allantoin compare
Psyr_0822 +0.7 2.0 1-phosphofructokinase compare
Psyr_1447 +0.7 1.5 conserved hypothetical protein compare
Psyr_1955 +0.7 2.5 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_0248 +0.7 2.6 conserved hypothetical protein compare
Psyr_3545 +0.7 2.7 Short-chain dehydrogenase/reductase SDR compare
Psyr_3812 +0.7 1.9 CDS compare
Psyr_4440 +0.7 3.3 Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_3518 +0.7 2.5 hypothetical protein compare
Psyr_3405 +0.7 3.5 Abortive infection protein compare
Psyr_2767 +0.7 1.6 Glycoside hydrolase, family 19 compare
Psyr_3480 +0.6 2.3 Flagellar basal-body rod protein FlgC compare
Psyr_0746 +0.6 2.1 IS66 Orf2 like protein compare
Psyr_1852 +0.6 1.4 conserved hypothetical protein compare
Psyr_1881 +0.6 2.6 conserved hypothetical protein compare
Psyr_2873 +0.6 2.7 Acyl-CoA dehydrogenase, C-terminal compare
Psyr_2318 +0.6 1.6 CDS compare
Psyr_2362 +0.6 1.8 Silent information regulator protein Sir2 compare
Psyr_3611 +0.6 2.2 Protein of unknown function DUF815 compare
Psyr_2501 +0.6 1.9 Hemerythrin compare
Psyr_3932 +0.6 2.0 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_2309 +0.6 2.8 conserved hypothetical protein compare
Psyr_3555 +0.6 1.0 aspartate kinase compare
Psyr_3784 +0.6 2.7 conserved hypothetical protein compare
Psyr_2823 +0.6 1.1 hypothetical protein compare
Psyr_2487 +0.6 1.6 Short-chain dehydrogenase/reductase SDR compare
Psyr_4151 +0.6 1.2 Phosphocarrier HPr protein compare
Psyr_2081 +0.6 2.5 conserved hypothetical protein compare
Psyr_2887 +0.6 1.6 Endoribonuclease L-PSP compare
Psyr_3837 +0.6 1.8 conserved hypothetical protein compare
Psyr_4336 +0.6 1.5 ribosomal large subunit pseudouridine synthase E compare
Psyr_2578 +0.6 1.4 regulatory protein, LuxR compare
Psyr_3337 +0.6 1.8 gluconate kinase, SKI family compare
Psyr_3530 +0.6 2.6 transcriptional regulator, GntR family compare
Psyr_2435 +0.6 2.3 Xylulokinase compare
Psyr_3841 +0.6 1.2 conserved hypothetical protein compare
Psyr_2741 +0.6 2.2 Beta-lactamase compare
Psyr_3782 +0.6 1.9 CsbD-like protein compare
Psyr_2829 +0.6 1.8 conserved hypothetical protein compare
Psyr_1600 +0.5 2.3 Zinc-containing alcohol dehydrogenase superfamily compare
Psyr_4673 +0.5 1.0 Coenzyme PQQ synthesis D compare
Psyr_4153 +0.5 2.3 conserved hypothetical protein compare
Psyr_0038 +0.5 2.0 Protein of unknown function DUF1161 compare
Psyr_2223 +0.5 1.3 sarcosine oxidase, delta subunit compare
Psyr_4487 +0.5 1.6 Carbohydrate kinase, PfkB compare
Psyr_0231 +0.5 1.7 conserved hypothetical protein compare
Psyr_3331 +0.5 2.4 Glycolate oxidase subunit GlcD compare
Psyr_1138 +0.5 1.6 GCN5-related N-acetyltransferase compare
Psyr_2196 +0.5 1.3 Urease accessory protein UreG compare
Psyr_RNA28 +0.5 1.3 tRNA-Val compare
Psyr_1966 +0.5 1.7 Peptidase M19, renal dipeptidase compare
Psyr_1893 +0.5 2.5 Isochorismatase hydrolase compare
Psyr_1274 +0.5 1.4 transferase hexapeptide repeat protein compare
Psyr_2925 +0.5 1.2 Helix-turn-helix motif protein compare
Psyr_2171 +0.5 0.8 HpcH/HpaI aldolase compare
Psyr_2588 +0.5 1.0 HpcH/HpaI aldolase compare
Psyr_2107 +0.5 2.0 Ribosome modulation factor compare
Psyr_3741 +0.5 2.6 Polyphosphate:AMP phosphotransferase compare
Psyr_3601 +0.5 0.9 conserved hypothetical protein compare
Psyr_2211 +0.5 1.5 monooxygenase, NtaA/SnaA/SoxA family compare
Psyr_4763 +0.5 2.7 Peptidase C56, PfpI compare
Psyr_0545 +0.5 1.5 Permease for cytosine/purines, uracil, thiamine, allantoin compare
Psyr_2605 +0.5 1.8 transposase, putative compare
Psyr_1391 +0.5 2.7 GCN5-related N-acetyltransferase compare
Psyr_1973 +0.5 1.2 Aspartate transaminase compare
Psyr_2952 +0.5 2.4 NADP oxidoreductase, coenzyme F420-dependent compare
Psyr_1585 +0.5 2.8 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal compare
Psyr_4092 +0.5 2.0 Glutathione S-transferase, N-terminal compare
Psyr_4596 +0.5 1.9 conserved hypothetical protein compare
Psyr_1666 +0.5 1.9 Sporulation related protein compare
Psyr_3652 +0.5 1.6 Short-chain dehydrogenase/reductase SDR compare
Psyr_2051 +0.5 2.2 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_3606 +0.5 2.5 ABC transporter, substrate-binding protein, aliphatic sulfonate compare
Psyr_4942 +0.5 1.3 HAD-superfamily hydrolase, subfamily IA, variant 3 compare
Psyr_3723 +0.5 1.1 CDS compare
Psyr_3938 +0.5 1.6 Amidase compare
Psyr_3006 +0.5 1.8 Protein of unknown function DUF419 compare
Psyr_2725 +0.5 2.3 Thiolase compare
Psyr_1753 +0.5 2.8 conserved hypothetical protein compare
Psyr_2882 +0.5 2.5 transcriptional regulator, AraC family compare
Psyr_3675 +0.5 1.3 adenosylcobinamide kinase compare
Psyr_2073 +0.5 1.6 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase compare
Psyr_3067 +0.5 2.8 conserved hypothetical protein compare
Psyr_2524 +0.5 2.2 conserved hypothetical protein compare
Psyr_4113 +0.5 3.4 LppC putative lipoprotein compare
Psyr_3184 +0.5 1.7 ATP-dependent Clp protease adaptor protein ClpS compare
Psyr_3676 +0.5 1.4 adenosylcobyric acid synthase (glutamine-hydrolysing) compare
Psyr_2225 +0.4 1.6 methenyltetrahydrofolate cyclohydrolase / 5,10-methylenetetrahydrofolate dehydrogenase (NADP+) compare
Psyr_4380 +0.4 1.7 translation initiation factor 1 (eIF-1/SUI1) compare
Psyr_3241 +0.4 1.5 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein compare
Psyr_3820 +0.4 1.2 conserved domain protein compare
Psyr_4658 +0.4 1.5 CDS compare
Psyr_2646 +0.4 3.3 Radical SAM compare
Psyr_4628 +0.4 2.2 Protein of unknown function DUF525 compare
Psyr_0315 +0.4 1.8 Protein of unknown function DUF589 compare
Psyr_2401 +0.4 1.6 extracellular solute-binding protein, family 1 compare
Psyr_3710 +0.4 1.9 conserved hypothetical protein compare
Psyr_1222 +0.4 0.6 CDS compare
Psyr_2538 +0.4 0.7 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1936 +0.4 1.6 tRNA-U16,U17-dihydrouridine synthase compare
Psyr_4802 +0.4 1.7 Secretion protein HlyD compare
Psyr_2237 +0.4 2.4 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer compare
Psyr_3653 +0.4 2.0 GGDEF domain protein compare
Psyr_3882 +0.4 1.2 conserved hypothetical protein compare
Psyr_2514 +0.4 1.4 ABC transporter compare
Psyr_3798 +0.4 2.6 conserved domain protein compare
Psyr_4831 +0.4 1.0 ABC transporter compare
Psyr_2986 +0.4 2.4 Glycoside hydrolase, family 15 compare
Psyr_1997 +0.4 1.5 amino acid ABC transporter substrate-binding protein, PAAT family compare
Psyr_2124 +0.4 1.7 Benzoate transport compare
Psyr_0447 +0.4 1.3 malonate decarboxylase subunit, putative compare
Psyr_1104 +0.4 1.6 Heme oxygenase compare
Psyr_1715 +0.4 2.2 Exodeoxyribonuclease I subunit D compare
Psyr_3542 +0.4 2.3 Short-chain dehydrogenase/reductase SDR compare
Psyr_2541 +0.4 1.7 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_2544 +0.4 1.1 Alkylhydroperoxidase AhpD core:Uncharacterized peroxidase-related protein compare
Psyr_2526 +0.4 2.6 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)-like protein compare
Psyr_2787 +0.4 0.8 hypothetical protein compare
Psyr_2765 +0.4 1.4 conserved domain protein compare
Psyr_3165 +0.4 2.9 transcriptional regulator, LysR family compare
Psyr_3591 +0.4 1.3 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_0085 +0.4 1.5 conserved hypothetical protein compare
Psyr_4940 +0.4 0.9 3'(2'),5'-bisphosphate nucleotidase compare
Psyr_3462 +0.4 0.9 conserved hypothetical protein compare
Psyr_4695 +0.4 2.5 extracellular solute-binding protein, family 1 compare
Psyr_1405 +0.4 1.1 hypothetical protein compare
Psyr_3224 +0.4 1.8 Low molecular weight phosphotyrosine protein phosphatase compare
Psyr_2781 +0.4 1.4 hypothetical protein compare
Psyr_1390 +0.4 2.2 RNA-binding S4 compare
Psyr_5036 +0.4 1.3 Response regulator receiver compare
Psyr_3046 +0.4 1.6 Protein of unknown function DUF330 compare
Psyr_3479 +0.4 1.6 Flagellar hook capping protein compare
Psyr_4262 +0.4 0.8 lipoprotein, putative compare
Psyr_2890 +0.4 1.1 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_4049 +0.4 1.4 lyso-ornithine lipid acyltransferase compare
Psyr_1163 +0.4 1.5 Isochorismatase hydrolase compare
Psyr_0897 +0.4 1.8 Protein of unknown function DUF6 compare
Psyr_1480 +0.4 1.6 conserved hypothetical protein compare
Psyr_2943 +0.4 1.9 amino acid ABC transporter membrane protein 2, PAAT family compare
Psyr_0142 +0.4 2.0 ABC transporter compare
Psyr_3229 +0.4 2.1 Glycosyl transferase, group 1 compare
Psyr_2134 +0.4 0.8 protein of unknown function DUF903 compare
Psyr_0299 +0.4 1.7 transcriptional regulator, GntR family compare
Psyr_0433 +0.4 1.6 Glycosyl transferase, family 2 compare
Psyr_1251 +0.4 1.2 quinoprotein compare
Psyr_4413 +0.4 1.8 conserved hypothetical protein compare
Psyr_1999 +0.4 1.5 OmpA/MotB compare
Psyr_2926 +0.4 2.0 General substrate transporter:Major facilitator superfamily compare
Psyr_3877 +0.4 1.4 Succinylglutamate desuccinylase/aspartoacylase compare
Psyr_2999 +0.4 1.1 LmbE-like protein compare
Psyr_0635 +0.4 1.1 MaoC-like dehydratase compare
Psyr_4466 +0.4 1.0 Thioredoxin compare
Psyr_0755 +0.4 2.2 conserved hypothetical protein compare
Psyr_2675 +0.4 1.5 transcriptional regulator, GntR family compare
Psyr_2032 +0.4 1.8 two component transcriptional regulator, winged helix family compare
Psyr_2778 +0.4 1.3 Phage minor tail protein L compare
Psyr_0845 +0.4 1.2 conserved hypothetical protein compare
Psyr_3558 +0.4 1.5 6,7-dimethyl-8-ribityllumazine synthase compare
Psyr_2026 +0.4 1.5 conserved hypothetical protein compare
Psyr_4967 +0.4 1.4 conserved hypothetical protein compare
Psyr_2364 +0.4 1.2 conserved hypothetical protein compare
Psyr_0576 +0.4 1.2 ATP phosphoribosyltransferase regulatory subunit, putative compare
Psyr_4789 +0.4 1.1 lipoprotein, putative compare
Psyr_2955 +0.4 1.1 Surfeit locus 4-related protein compare
Psyr_2446 +0.4 1.7 MCP methyltransferase, CheR-type compare
Psyr_4693 +0.4 1.3 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2527 +0.4 1.4 GCN5-related N-acetyltransferase compare
Psyr_1064 +0.4 2.0 Protein of unknown function DUF328 compare
Psyr_2228 +0.4 1.7 conserved hypothetical protein compare
Psyr_1273 +0.4 1.7 NUDIX hydrolase compare
Psyr_3191 +0.4 1.1 Protein of unknown function DUF489 compare
Psyr_1502 +0.4 2.1 Low molecular weight phosphotyrosine protein phosphatase compare
Psyr_1196 +0.4 1.3 type III secretion protein HrpD compare
Psyr_2300 +0.4 1.8 Conserved hypothetical protein 374 compare
Psyr_2066 +0.4 1.8 Protein of unknown function DUF214:Fimbrial assembly compare
Psyr_4044 +0.4 1.7 Phospholipase D/Transphosphatidylase compare
Psyr_4391 +0.4 1.4 type II and III secretion system protein compare
Psyr_0356 +0.4 0.5 L-cystine ABC transporter ATP-binding protein / Diaminopimelate ABC transporter ATP-binding protein compare
Psyr_3276 +0.4 2.2 membrane protein, putative compare
Psyr_4577 +0.4 1.6 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp compare
Psyr_2144 +0.4 0.8 conserved hypothetical protein compare
Psyr_2586 +0.4 1.5 Drug resistance transporter EmrB/QacA subfamily compare
Psyr_2082 +0.4 1.6 membrane protein, putative compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Strychnine Sulfate across organisms