Experiment set11IT028 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Myricetin 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_1613 -3.8 -4.5 septum site-determining protein MinC compare
Psyr_1544 -3.8 -4.5 SirA-like protein compare
Psyr_4684 -3.6 -3.4 biotin synthesis protein BioC compare
Psyr_4740 -3.5 -6.2 thiazole-phosphate synthase compare
Psyr_4687 -3.3 -7.2 biotin synthase compare
Psyr_1663 -3.2 -3.1 phosphoribosylanthranilate isomerase compare
Psyr_4340 -3.2 -10.6 phosphomethylpyrimidine kinase, putative compare
Psyr_4091 -3.0 -5.8 8-oxo-dGTPase compare
Psyr_4203 -3.0 -2.8 SsrA-binding protein compare
Psyr_4686 -2.8 -6.1 8-amino-7-oxononanoate synthase compare
Psyr_3008 -2.8 -8.2 Undecaprenyl-diphosphatase compare
Psyr_3287 -2.8 -2.6 DNA topoisomerase I compare
Psyr_4683 -2.7 -5.1 dethiobiotin synthase compare
Psyr_4341 -2.7 -8.0 thiamine-phosphate diphosphorylase compare
Psyr_0383 -2.5 -2.9 Twin-arginine translocation protein TatB compare
Psyr_0849 -2.4 -10.2 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_1373 -2.4 -3.8 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_0475 -2.3 -2.7 Protein of unknown function YGGT compare
Psyr_0951 -2.3 -2.9 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_0454 -2.2 -5.9 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_1556 -2.1 -2.8 hypothetical protein compare
Psyr_2143 -2.0 -2.7 delta1-piperideine 2-carboxylate reductase compare
Psyr_0565 -2.0 -5.0 Protein of unknown function UPF0126 compare
Psyr_0917 -1.9 -10.8 ABC-2 compare
Psyr_0918 -1.9 -11.8 ABC transporter compare
Psyr_3152 -1.8 -2.3 hypothetical protein compare
Psyr_1408 -1.7 -3.8 Holliday junction endonuclease RuvC compare
Psyr_0255 -1.7 -2.7 glutamate-cysteine ligase compare
Psyr_1930 -1.7 -3.9 hypothetical protein compare
Psyr_4362 -1.6 -3.2 Rare lipoprotein A compare
Psyr_0574 -1.6 -5.2 protease FtsH subunit HflK compare
Psyr_3954 -1.6 -5.9 GTP-binding protein LepA compare
Psyr_4580 -1.6 -2.6 anthranilate phosphoribosyltransferase compare
Psyr_2642 -1.5 -4.8 hypothetical protein compare
Psyr_1667 -1.5 -5.4 Colicin V production protein compare
Psyr_4822 -1.5 -2.9 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_3808 -1.5 -1.9 hypothetical protein compare
Psyr_4627 -1.4 -2.6 dimethyladenosine transferase compare
Psyr_0826 -1.4 -5.8 glucose-6-phosphate isomerase compare
Psyr_3807 -1.4 -6.3 hypothetical protein compare
Psyr_4581 -1.4 -1.4 anthranilate synthase, component II compare
Psyr_2227 -1.4 -2.6 conserved hypothetical protein compare
Psyr_4991 -1.3 -2.4 hypothetical protein compare
Psyr_4019 -1.3 -3.7 H-NS family protein MvaT compare
Psyr_1751 -1.3 -3.9 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_0184 -1.3 -3.8 Protein of unknown function DUF484 compare
Psyr_2769 -1.3 -3.8 conserved hypothetical protein compare
Psyr_0014 -1.3 -3.6 lipid A biosynthesis acyltransferase compare
Psyr_3581 -1.3 -5.2 ribosomal large subunit pseudouridine synthase B compare
Psyr_0487 -1.3 -2.5 glutathione synthase compare
Psyr_3090 -1.3 -1.5 hypothetical protein compare
Psyr_3806 -1.3 -4.7 hypothetical protein compare
Psyr_1832 -1.3 -3.2 Exonuclease compare
Psyr_1748 -1.2 -4.6 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_1907 -1.2 -2.8 GTP cyclohydrolase I compare
Psyr_4884 -1.2 -3.8 Rhodanese-like protein compare
Psyr_0580 -1.2 -3.8 23S rRNA Gm-2251 2'-O-methyltransferase compare
Psyr_0575 -1.2 -2.8 protease FtsH subunit HflC compare
Psyr_5135 -1.2 -1.8 Protein of unknown function DUF37 compare
Psyr_3728 -1.2 -4.0 hypothetical protein compare
Psyr_3127 -1.2 -3.6 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_4774 -1.2 -1.3 Hypothetical protein compare
Psyr_0034 -1.1 -0.8 tryptophan synthase, beta chain compare
Psyr_1935 -1.1 -3.9 Protein of unknown function DUF796 compare
Psyr_2462 -1.1 -3.0 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_2854 -1.1 -3.4 conserved hypothetical protein compare
Psyr_0535 -1.1 -3.0 toluene tolerance protein, putative compare
Psyr_1747 -1.1 -3.5 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_2921 -1.1 -2.0 ADP-ribosylglycohydrolase compare
Psyr_4519 -1.1 -5.1 General substrate transporter:Major facilitator superfamily compare
Psyr_0638 -1.1 -2.4 Peptidase S16, lon N-terminal compare
Psyr_5133 -1.1 -3.2 tRNA modification GTPase trmE compare
Psyr_5132 -1.1 -2.2 Glucose-inhibited division protein A subfamily compare
Psyr_1555 -1.0 -2.8 Cobyrinic acid a,c-diamide synthase compare
Psyr_0281 -1.0 -2.6 ABC transporter compare
Psyr_0282 -1.0 -4.0 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3432 -1.0 -2.7 MotA/TolQ/ExbB proton channel compare
Psyr_2031 -1.0 -2.3 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_1419 -1.0 -2.5 preQ(0) biosynthesis protein QueC compare
Psyr_4609 -1.0 -7.0 anthranilate synthase, component I compare
Psyr_3906 -1.0 -2.0 regulatory protein, DeoR compare
Psyr_2471 -1.0 -2.0 hydroxymethylglutaryl-CoA lyase compare
Psyr_1227 -1.0 -2.4 Queuosine biosynthesis protein compare
Psyr_2071 -1.0 -2.3 outer membrane lipoprotein OprI compare
Psyr_2664 -1.0 -4.2 hypothetical protein compare
Psyr_1410 -1.0 -2.9 Holliday junction DNA helicase RuvB compare
Psyr_4118 -1.0 -3.9 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal compare
Psyr_2872 -0.9 -1.5 hypothetical protein compare
Psyr_1404 -0.9 -5.8 Ferritin and Dps compare
Psyr_4089 -0.9 -3.5 PAS compare
Psyr_3701 -0.9 -1.7 thioredoxin, putative compare
Psyr_3554 -0.9 -1.3 Carbon storage regulator compare
Psyr_4902 -0.9 -2.7 Protein of unknown function DUF495 compare
Psyr_2262 -0.9 -2.1 Peptidase M20:Peptidase M20 compare
Psyr_2346 -0.9 -2.8 conserved hypothetical protein compare
Psyr_1588 -0.9 -2.6 Putative exonuclease, RdgC compare
Psyr_3854 -0.9 -1.3 OmpA/MotB compare
Psyr_2855 -0.9 -2.2 methionine synthase (B12-independent) compare
Psyr_3208 -0.9 -1.9 NADH dehydrogenase subunit M compare
Psyr_1418 -0.9 -2.2 Radical SAM compare
Psyr_4512 -0.8 -4.2 putative phage-related protein compare
Psyr_0259 -0.8 -2.4 Osmolarity sensor protein envZ compare
Psyr_1094 -0.8 -2.6 cold-shock DNA-binding protein family compare
Psyr_3658 -0.8 -4.5 Rhodanese-like protein compare
Psyr_1980 -0.8 -2.2 Heat shock protein Hsp20 compare
Psyr_4978 -0.8 -2.5 hypothetical protein compare
Psyr_1371 -0.8 -3.7 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_1460 -0.8 -3.3 hypothetical protein compare
Psyr_3857 -0.8 -2.8 conserved hypothetical protein compare
Psyr_1212 -0.8 -1.7 type III secretion protein HrpO compare
Psyr_5130 -0.8 -4.2 chromosome segregation ATPase compare
Psyr_2842 -0.8 -4.1 hypothetical protein compare
Psyr_0550 -0.8 -2.2 Protein of unknown function UPF0227 compare
Psyr_2980 -0.8 -2.2 UDP-glucose pyrophosphorylase compare
Psyr_2095 -0.8 -2.4 Conserved TM helix compare
Psyr_1719 -0.8 -1.9 conserved hypothetical protein compare
Psyr_0393 -0.8 -2.6 Protein of unknown function DUF971 compare
Psyr_2428 -0.8 -2.2 GCN5-related N-acetyltransferase compare
Psyr_4893 -0.8 -1.8 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_3104 -0.8 -1.5 phosphate ABC transporter membrane protein 2, PhoT family compare
Psyr_4634 -0.8 -1.1 Polynucleotide adenylyltransferase:Metal-dependent phosphohydrolase, HD subdomain protein compare
Psyr_1975 -0.8 -1.4 Integrase, catalytic region compare
Psyr_3896 -0.8 -1.6 BFD-like [2Fe-2S]-binding region compare
Psyr_3644 -0.8 -2.0 prephenate dehydrogenase compare
Psyr_1614 -0.7 -2.0 lipid A biosynthesis acyltransferase compare
Psyr_4112 -0.7 -4.4 Protein of unknown function UPF0011 compare
Psyr_1843 -0.7 -2.0 Protein of unknown function DUF1311 compare
Psyr_4136 -0.7 -1.2 BolA-like protein compare
Psyr_0493 -0.7 -2.1 CheW-like protein compare
Psyr_1250 -0.7 -1.6 conserved hypothetical protein compare
Psyr_2977 -0.7 -1.7 cointegrate resolution protein T compare
Psyr_1968 -0.7 -1.9 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_4408 -0.7 -4.0 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_3655 -0.7 -5.3 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) compare
Psyr_3164 -0.7 -4.2 Protein of unknown function UPF0005 compare
Psyr_4989 -0.7 -2.7 hypothetical protein compare
Psyr_2112 -0.7 -0.9 Protein with unknown function DUF469 compare
Psyr_3290 -0.7 -2.1 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_2617 -0.7 -1.1 Secretion protein HlyD compare
Psyr_2345 -0.7 -2.5 ea59 protein compare
Psyr_4278 -0.7 -1.4 regulatory protein, LuxR compare
Psyr_2969 -0.7 -3.4 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_3118 -0.7 -1.4 transcriptional regulator, GntR family compare
Psyr_4417 -0.7 -1.3 Ferredoxin--nitrite reductase compare
Psyr_3013 -0.7 -1.4 magnesium chelatase subunit ChlD compare
Psyr_1645 -0.7 -2.0 phosphate:acyl-[acyl carrier protein] acyltransferase compare
Psyr_0571 -0.7 -2.1 tRNA isopentenyltransferase compare
Psyr_1357 -0.7 -2.6 RNase HII compare
Psyr_2820 -0.7 -1.8 RecT protein compare
Psyr_4055 -0.7 -1.9 conserved domain protein compare
Psyr_3555 -0.7 -1.3 aspartate kinase compare
Psyr_2847 -0.7 -1.6 hypothetical protein compare
Psyr_1247 -0.7 -1.2 conserved hypothetical protein compare
Psyr_5129 -0.7 -2.5 chromosome segregation DNA-binding protein compare
Psyr_1515 -0.7 -2.6 hypothetical protein compare
Psyr_0941 -0.7 -3.1 Conserved hypothetical protein 92 compare
Psyr_2544 -0.7 -2.1 Alkylhydroperoxidase AhpD core:Uncharacterized peroxidase-related protein compare
Psyr_0215 -0.7 -4.4 Exodeoxyribonuclease III xth compare
Psyr_2770 -0.7 -3.1 tail fiber domain protein compare
Psyr_5065 -0.7 -3.8 ATP-dependent DNA helicase UvrD compare
Psyr_0724 -0.7 -1.9 conserved hypothetical protein compare
Psyr_1458 -0.6 -1.4 hypothetical protein compare
Psyr_3665 -0.6 -1.9 conserved hypothetical protein compare
Psyr_3213 -0.6 -1.4 Propeptide, PepSY amd peptidase M4 compare
Psyr_2848 -0.6 -2.2 hypothetical protein compare
Psyr_1350 -0.6 -1.8 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_2543 -0.6 -0.9 conserved hypothetical protein compare
Psyr_1931 -0.6 -2.7 hypothetical protein compare
Psyr_2612 -0.6 -1.3 syrP protein, putative compare
Psyr_0202 -0.6 -4.1 transcriptional regulator, LysR family compare
Psyr_0529 -0.6 -2.0 Glycosyl transferase, group 1 compare
Psyr_0791 -0.6 -1.4 MOSC compare
Psyr_2221 -0.6 -1.2 sarcosine oxidase, gamma subunit compare
Psyr_1791 -0.6 -1.3 HAD-superfamily hydrolase, subfamily IA, variant 2 compare
Psyr_3089 -0.6 -5.0 Hemolysin-type calcium-binding region:hemolysin-type calcium binding related protein compare
Psyr_4833 -0.6 -1.9 histidine ammonia-lyase compare
Psyr_1929 -0.6 -2.2 hypothetical protein compare
Psyr_3107 -0.6 -1.4 conserved hypothetical protein compare
Psyr_1140 -0.6 -1.9 Disulfide bond formation protein DsbB compare
Psyr_2184 -0.6 -1.4 Short-chain dehydrogenase/reductase SDR compare
Psyr_2985 -0.6 -1.6 DNA-N1-methyladenine dioxygenase compare
Psyr_0792 -0.6 -2.4 conserved hypothetical protein compare
Psyr_1934 -0.6 -3.2 conserved hypothetical protein compare
Psyr_0294 -0.6 -2.6 Exopolyphosphatase compare
Psyr_1688 -0.6 -1.5 Protein of unknown function DUF1315 compare
Psyr_4566 -0.6 -3.7 Peptidase M23B compare
Psyr_3867 -0.6 -0.9 hypothetical protein compare
Psyr_1553 -0.6 -2.9 hypothetical protein compare
Psyr_0919 -0.6 -4.0 Chromosome segregation ATPase-like protein compare
Psyr_2474 -0.6 -1.8 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region compare
Psyr_2628 -0.6 -2.0 ABC transporter compare
Psyr_1783 -0.6 -1.5 CDS compare
Psyr_4093 -0.6 -2.6 glutamate N-acetyltransferase compare
Psyr_4933 -0.6 -3.0 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase compare
Psyr_1718 -0.6 -2.1 von Willebrand factor, type A compare
Psyr_2899 -0.6 -2.1 conserved hypothetical protein compare
Psyr_2641 -0.6 -1.6 hypothetical protein compare
Psyr_0622 -0.6 -1.3 transcriptional regulator, XRE family compare
Psyr_4386 -0.6 -2.3 conserved hypothetical protein compare
Psyr_2092 -0.6 -1.3 Protein of unknown function 1935 compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Myricetin across organisms