Experiment set11IT027 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with 2',2'-Bisepigallocatechin Digallate 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_0951 -5.0 -3.4 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_0255 -3.6 -2.5 glutamate-cysteine ligase compare
Psyr_4340 -3.6 -8.8 phosphomethylpyrimidine kinase, putative compare
Psyr_1544 -3.4 -4.6 SirA-like protein compare
Psyr_3008 -3.4 -8.4 Undecaprenyl-diphosphatase compare
Psyr_1613 -3.1 -5.1 septum site-determining protein MinC compare
Psyr_1663 -3.1 -3.6 phosphoribosylanthranilate isomerase compare
Psyr_4341 -3.0 -7.0 thiamine-phosphate diphosphorylase compare
Psyr_4686 -2.8 -6.4 8-amino-7-oxononanoate synthase compare
Psyr_4991 -2.8 -3.7 hypothetical protein compare
Psyr_4687 -2.7 -7.4 biotin synthase compare
Psyr_4684 -2.6 -3.5 biotin synthesis protein BioC compare
Psyr_4683 -2.6 -4.9 dethiobiotin synthase compare
Psyr_4740 -2.6 -6.6 thiazole-phosphate synthase compare
Psyr_0849 -2.6 -10.1 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_0918 -2.3 -12.1 ABC transporter compare
Psyr_0487 -2.3 -3.0 glutathione synthase compare
Psyr_4203 -2.2 -3.0 SsrA-binding protein compare
Psyr_4091 -2.1 -4.4 8-oxo-dGTPase compare
Psyr_0917 -2.0 -10.4 ABC-2 compare
Psyr_0475 -2.0 -3.2 Protein of unknown function YGGT compare
Psyr_5132 -1.9 -3.6 Glucose-inhibited division protein A subfamily compare
Psyr_3620 -1.9 -2.4 hypothetical protein compare
Psyr_0454 -1.9 -5.4 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_5072 -1.9 -2.0 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_4580 -1.9 -2.7 anthranilate phosphoribosyltransferase compare
Psyr_0574 -1.8 -5.3 protease FtsH subunit HflK compare
Psyr_2251 -1.7 -2.2 Phosphonate metabolism PhnG compare
Psyr_2347 -1.6 -3.2 hypothetical protein compare
Psyr_0014 -1.6 -4.2 lipid A biosynthesis acyltransferase compare
Psyr_1667 -1.5 -5.8 Colicin V production protein compare
Psyr_3013 -1.5 -2.7 magnesium chelatase subunit ChlD compare
Psyr_1907 -1.5 -3.5 GTP cyclohydrolase I compare
Psyr_4362 -1.4 -3.5 Rare lipoprotein A compare
Psyr_4822 -1.4 -2.2 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_1688 -1.4 -3.0 Protein of unknown function DUF1315 compare
Psyr_2848 -1.4 -3.7 hypothetical protein compare
Psyr_0565 -1.3 -6.0 Protein of unknown function UPF0126 compare
Psyr_2973 -1.3 -2.8 Glyoxalase I compare
Psyr_3581 -1.3 -5.0 ribosomal large subunit pseudouridine synthase B compare
Psyr_4627 -1.3 -2.1 dimethyladenosine transferase compare
Psyr_4581 -1.3 -2.9 anthranilate synthase, component II compare
Psyr_1556 -1.3 -2.2 hypothetical protein compare
Psyr_1408 -1.2 -2.7 Holliday junction endonuclease RuvC compare
Psyr_1373 -1.2 -2.4 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_2346 -1.2 -4.0 conserved hypothetical protein compare
Psyr_0383 -1.2 -1.4 Twin-arginine translocation protein TatB compare
Psyr_4884 -1.2 -3.8 Rhodanese-like protein compare
Psyr_2095 -1.2 -4.2 Conserved TM helix compare
Psyr_1418 -1.2 -2.2 Radical SAM compare
Psyr_3954 -1.2 -4.8 GTP-binding protein LepA compare
Psyr_0373 -1.2 -1.8 CDS compare
Psyr_2642 -1.1 -3.9 hypothetical protein compare
Psyr_2769 -1.1 -3.5 conserved hypothetical protein compare
Psyr_0575 -1.1 -2.9 protease FtsH subunit HflC compare
Psyr_1748 -1.1 -4.3 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_3419 -1.1 -3.6 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_4786 -1.1 -1.2 hypothetical protein compare
Psyr_0826 -1.1 -4.8 glucose-6-phosphate isomerase compare
Psyr_1555 -1.1 -2.9 Cobyrinic acid a,c-diamide synthase compare
Psyr_3806 -1.1 -4.3 hypothetical protein compare
Psyr_0034 -1.1 -1.0 tryptophan synthase, beta chain compare
Psyr_1935 -1.0 -3.5 Protein of unknown function DUF796 compare
Psyr_4417 -1.0 -2.1 Ferredoxin--nitrite reductase compare
Psyr_1350 -1.0 -3.1 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_4609 -1.0 -6.7 anthranilate synthase, component I compare
Psyr_3555 -1.0 -1.7 aspartate kinase compare
Psyr_2738 -1.0 -3.8 regulatory protein, LysR compare
Psyr_3293 -1.0 -2.2 UspA compare
Psyr_1930 -1.0 -2.6 hypothetical protein compare
Psyr_1747 -1.0 -3.0 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_0215 -1.0 -6.2 Exodeoxyribonuclease III xth compare
Psyr_0724 -0.9 -2.0 conserved hypothetical protein compare
Psyr_0579 -0.9 -6.3 RNAse R compare
Psyr_2471 -0.9 -1.9 hydroxymethylglutaryl-CoA lyase compare
Psyr_4622 -0.9 -3.6 Nucleotidyl transferase compare
Psyr_0493 -0.9 -2.0 CheW-like protein compare
Psyr_1404 -0.9 -5.1 Ferritin and Dps compare
Psyr_2462 -0.9 -3.0 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_3164 -0.9 -5.1 Protein of unknown function UPF0005 compare
Psyr_1250 -0.9 -2.6 conserved hypothetical protein compare
Psyr_3193 -0.8 -1.8 Transcription factor jumonji, jmjC compare
Psyr_2617 -0.8 -1.5 Secretion protein HlyD compare
Psyr_0680 -0.8 -2.5 DNA helicase/exodeoxyribonuclease V, gamma subunit compare
Psyr_0524 -0.8 -2.5 Lipopolysaccharide kinase compare
Psyr_4089 -0.8 -3.5 PAS compare
Psyr_1410 -0.8 -2.6 Holliday junction DNA helicase RuvB compare
Psyr_0081 -0.8 -1.5 ABC transporter compare
Psyr_2092 -0.8 -2.2 Protein of unknown function 1935 compare
Psyr_4830 -0.8 -1.9 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3947 -0.8 -2.0 Methyltransferase, putative compare
Psyr_3585 -0.8 -2.5 Sua5/YciO/YrdC/YwlC compare
Psyr_0377 -0.8 -4.0 Periplasmic glucan biosynthesis protein, MdoG compare
Psyr_1227 -0.8 -2.1 Queuosine biosynthesis protein compare
Psyr_5133 -0.8 -2.4 tRNA modification GTPase trmE compare
Psyr_4519 -0.8 -4.0 General substrate transporter:Major facilitator superfamily compare
Psyr_0294 -0.8 -2.9 Exopolyphosphatase compare
Psyr_0919 -0.8 -5.5 Chromosome segregation ATPase-like protein compare
Psyr_4566 -0.8 -4.7 Peptidase M23B compare
Psyr_1249 -0.8 -2.5 histidyl-tRNA synthetase compare
Psyr_0053 -0.8 -2.1 conserved hypothetical protein compare
Psyr_2664 -0.8 -3.7 hypothetical protein compare
Psyr_2990 -0.8 -2.4 conserved hypothetical protein compare
Psyr_5130 -0.8 -4.2 chromosome segregation ATPase compare
Psyr_0319 -0.8 -3.9 conserved hypothetical protein compare
Psyr_2386 -0.8 -1.0 hypothetical protein compare
Psyr_0033 -0.7 -0.7 tryptophan synthase, alpha chain compare
Psyr_4057 -0.7 -2.5 regulatory protein, LysR:LysR, substrate-binding protein compare
Psyr_0404 -0.7 -2.6 Fimbrial assembly compare
Psyr_1802 -0.7 -0.9 transcriptional regulator, AsnC family compare
Psyr_1751 -0.7 -2.1 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_0259 -0.7 -1.9 Osmolarity sensor protein envZ compare
Psyr_4019 -0.7 -2.7 H-NS family protein MvaT compare
Psyr_5065 -0.7 -3.9 ATP-dependent DNA helicase UvrD compare
Psyr_0270 -0.7 -2.3 DNA polymerase I compare
Psyr_3949 -0.7 -3.2 DNA replication and repair protein RecO compare
Psyr_1378 -0.7 -1.6 RecA protein compare
Psyr_3149 -0.7 -2.2 General secretion pathway protein G compare
Psyr_0941 -0.7 -3.8 Conserved hypothetical protein 92 compare
Psyr_0174 -0.7 -3.6 Sodium:dicarboxylate symporter compare
Psyr_2201 -0.7 -2.0 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family compare
Psyr_3290 -0.7 -2.2 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_1931 -0.7 -2.6 hypothetical protein compare
Psyr_0923 -0.7 -2.5 hypothetical protein compare
Psyr_3027 -0.7 -2.9 Protein kinase:Leucine-rich repeat protein compare
Psyr_3805 -0.7 -1.7 hypothetical protein compare
Psyr_2564 -0.7 -1.6 transcriptional regulator, GntR family compare
Psyr_3005 -0.7 -1.0 3-oxoadipate enol-lactonase compare
Psyr_3547 -0.7 -2.4 transcriptional regulator, TetR family compare
Psyr_4361 -0.7 -2.2 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 compare
Psyr_4112 -0.7 -4.2 Protein of unknown function UPF0011 compare
Psyr_0184 -0.7 -1.5 Protein of unknown function DUF484 compare
Psyr_2921 -0.7 -1.7 ADP-ribosylglycohydrolase compare
Psyr_3906 -0.7 -1.2 regulatory protein, DeoR compare
Psyr_0673 -0.7 -2.7 nucleoside ABC transporter ATP-binding protein compare
Psyr_4408 -0.7 -3.5 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_4093 -0.7 -2.8 glutamate N-acetyltransferase compare
Psyr_4100 -0.7 -2.5 D-alanine--D-alanine ligase compare
Psyr_2209 -0.7 -2.1 ABC transporter, substrate-binding protein, aliphatic sulfonate compare
Psyr_0179 -0.7 -2.1 Protein of unknown function DUF1289 compare
Psyr_4350 -0.7 -0.9 Protein of unknown function DUF218 compare
Psyr_3840 -0.6 -2.4 conserved hypothetical protein compare
Psyr_2899 -0.6 -2.3 conserved hypothetical protein compare
Psyr_1417 -0.6 -2.3 TPR repeat protein compare
Psyr_3854 -0.6 -1.0 OmpA/MotB compare
Psyr_2601 -0.6 -3.9 regulatory protein, LuxR compare
Psyr_2345 -0.6 -2.5 ea59 protein compare
Psyr_2190 -0.6 -0.9 NADH:flavin oxidoreductase/NADH oxidase compare
Psyr_2804 -0.6 -1.4 hypothetical protein compare
Psyr_3678 -0.6 -2.7 adenosylcobinamide-phosphate synthase compare
Psyr_2317 -0.6 -1.9 CDS compare
Psyr_0580 -0.6 -2.0 23S rRNA Gm-2251 2'-O-methyltransferase compare
Psyr_3808 -0.6 -0.6 hypothetical protein compare
Psyr_4476 -0.6 -2.3 dTDP-4-dehydrorhamnose reductase compare
Psyr_1749 -0.6 -3.3 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_1702 -0.6 -2.3 regulatory protein, LuxR compare
Psyr_4194 -0.6 -2.2 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_0920 -0.6 -5.2 Glycosyl transferase, group 1 compare
Psyr_3341 -0.6 -2.0 hypothetical protein compare
Psyr_3176 -0.6 -2.0 camphor resistance protein CrcB compare
Psyr_2739 -0.6 -1.9 ThiJ/PfpI compare
Psyr_4893 -0.6 -1.2 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_2644 -0.6 -4.6 Uncharacterized protein conserved in bacteria-like protein compare
Psyr_3427 -0.6 -1.1 conserved hypothetical protein compare
Psyr_2594 -0.6 -0.9 unknown conserved protein in bacilli compare
Psyr_4470 -0.6 -2.2 ABC transporter compare
Psyr_2824 -0.6 -2.0 conserved hypothetical protein compare
Psyr_2227 -0.6 -1.4 conserved hypothetical protein compare
Psyr_3835 -0.6 -1.2 hypothetical protein compare
Psyr_5129 -0.6 -1.6 chromosome segregation DNA-binding protein compare
Psyr_2842 -0.6 -2.9 hypothetical protein compare
Psyr_0927 -0.6 -1.1 hypothetical protein compare
Psyr_4512 -0.6 -3.3 putative phage-related protein compare
Psyr_3739 -0.6 -1.5 conserved hypothetical protein compare
Psyr_4118 -0.6 -3.0 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal compare
Psyr_3952 -0.6 -1.7 conserved hypothetical protein compare
Psyr_0774 -0.6 -2.2 monosaccharide ABC transporter membrane protein, CUT2 family compare
Psyr_1947 -0.6 -1.0 MbtH-like protein compare
Psyr_0378 -0.6 -3.6 Glycosyl transferase, family 2 compare
Psyr_2321 -0.6 -3.2 YD repeat protein compare
Psyr_2980 -0.6 -1.6 UDP-glucose pyrophosphorylase compare
Psyr_4879 -0.6 -2.2 hypothetical protein compare
Psyr_3127 -0.6 -1.5 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_2398 -0.6 -1.7 ABC transporter compare
Psyr_1718 -0.6 -2.0 von Willebrand factor, type A compare
Psyr_1460 -0.6 -1.9 hypothetical protein compare
Psyr_3677 -0.6 -1.8 Aminotransferase, class I and II compare
Psyr_4254 -0.5 -1.0 conserved hypothetical protein compare
Psyr_2312 -0.5 -1.0 Protein of unknown function DUF24 compare
Psyr_1009 -0.5 -1.4 Peptidylprolyl isomerase, FKBP-type compare
Psyr_3418 -0.5 -2.4 PilT protein, N-terminal compare
Psyr_0827 -0.5 -2.3 pantothenate synthetase compare
Psyr_0490 -0.5 -2.4 CheW-like protein compare
Psyr_4978 -0.5 -1.6 hypothetical protein compare
Psyr_1806 -0.5 -1.7 Ureidoglycolate hydrolase compare
Psyr_4754 -0.5 -0.8 16S rRNA m(2)G-966 methyltransferase compare
Psyr_0928 -0.5 -3.7 hypothetical protein compare
Psyr_RNA61 -0.5 -1.8 tRNA-Gly compare
Psyr_2474 -0.5 -1.6 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region compare
Psyr_1050 -0.5 -1.6 conserved hypothetical protein compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress 2',2'-Bisepigallocatechin Digallate across organisms