Experiment set11IT019 for Pseudomonas fluorescens FW300-N2E2

Compare to:

RCH2 defined with Cobalt chloride hexahydrate 0.04 mM

Genes with specific phenotypes:

  gene name fitness t score description  
Pf6N2E2_2251 -4.5 -6.1 NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) conserved
Pf6N2E2_4484 -3.1 -15.2 Ferric iron ABC transporter, permease protein conserved
Pf6N2E2_5578 -3.0 -7.7 Ferric iron ABC transporter, ATP-binding protein conserved
Pf6N2E2_3627 -2.8 -7.4 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) compare
Pf6N2E2_4483 -2.7 -15.7 Ferric iron ABC transporter, iron-binding protein conserved
Pf6N2E2_5711 -2.6 -6.8 tRNA(Cytosine32)-2-thiocytidine synthetase compare
Pf6N2E2_1605 -2.5 -6.8 Carboxynorspermidine dehydrogenase, putative (EC 1.1.1.-) compare
Pf6N2E2_5618 -2.3 -9.5 Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites conserved
Pf6N2E2_3079 -2.2 -7.4 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA compare
Pf6N2E2_4357 -2.1 -10.4 Nucleoside-diphosphate-sugar epimerases conserved
Pf6N2E2_5616 -2.0 -5.5 outer membrane component of uptake system, probably for ferrous iron (from data) conserved
Pf6N2E2_4413 -2.0 -8.3 FIG004064: hypothetical protein compare
Pf6N2E2_1239 -1.7 -5.6 Putative TEGT family carrier/transport protein compare
Pf6N2E2_2391 -1.7 -6.6 FIG137360: hypothetical protein compare
Pf6N2E2_5617 -1.5 -5.2 Iron-regulated protein A precursor conserved
Pf6N2E2_4447 -1.5 -10.3 Cytochrome c family protein compare
Pf6N2E2_5404 -1.5 -6.7 ABC transporter for D-Alanine, permease component 1 (from data) compare
Pf6N2E2_5960 -1.3 -5.2 Putative deoxyribonuclease YcfH compare
Pf6N2E2_4091 -1.2 -6.9 Oligopeptidase A (EC 3.4.24.70) compare
Pf6N2E2_3334 -1.1 -6.9 Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19) compare
Pf6N2E2_5681 +1.0 6.1 RhtB family transporter compare
Pf6N2E2_5132 +1.0 5.7 NADH dehydrogenase (EC 1.6.99.3) conserved
Pf6N2E2_3606 +1.3 6.3 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) conserved
Pf6N2E2_2257 +1.4 5.6 tRNA dihydrouridine synthase A conserved
Pf6N2E2_5583 +1.5 6.1 Bacterioferritin conserved
Pf6N2E2_2426 +1.6 8.7 Similar to ribosomal large subunit pseudouridine synthase A compare
Pf6N2E2_3918 +1.6 9.7 D-cysteine desulfhydrase (EC 4.4.1.15) conserved
Pf6N2E2_459 +1.7 7.3 Oxidoreductase, aldo/keto reductase family compare
Pf6N2E2_3114 +1.9 9.2 Transcriptional regulator, TetR family compare
Pf6N2E2_3317 +2.0 10.6 Ornithine cyclodeaminase (EC 4.3.1.12) compare
Pf6N2E2_5593 +2.1 5.8 Leucyl-tRNA synthetase compare
Pf6N2E2_4480 +2.1 13.5 Xaa-Pro aminopeptidase (EC 3.4.11.9) compare
Pf6N2E2_4555 +2.1 14.5 Lysophospholipase (EC 3.1.1.5) compare
Pf6N2E2_4630 +2.4 6.7 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) compare
Pf6N2E2_5017 +2.6 5.2 Phosphate starvation-inducible protein PhoH, predicted ATPase conserved
Pf6N2E2_458 +3.0 14.1 Protein rarD compare
Pf6N2E2_2254 +3.6 5.6 Cell filamentation protein fic compare
Pf6N2E2_4795 +4.8 5.8 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY compare
Pf6N2E2_3152 +5.0 18.4 Magnesium and cobalt efflux protein CorC conserved
Pf6N2E2_3191 +5.3 8.2 Serine acetyltransferase (EC 2.3.1.30) conserved
Pf6N2E2_5274 +5.8 26.9 FolM Alternative dihydrofolate reductase 1 conserved


Specific phenotypes for stress Cobalt chloride hexahydrate across organisms