Experiment set11IT017 for Pseudomonas fluorescens FW300-N2E2

Compare to:

RCH2 defined with Cobalt chloride hexahydrate 0.04 mM

Genes with specific phenotypes:

  gene name fitness t score description  
Pf6N2E2_2251 -5.8 -5.6 NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) conserved
Pf6N2E2_5711 -3.2 -7.3 tRNA(Cytosine32)-2-thiocytidine synthetase compare
Pf6N2E2_5578 -3.0 -9.5 Ferric iron ABC transporter, ATP-binding protein conserved
Pf6N2E2_3627 -3.0 -9.1 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) compare
Pf6N2E2_3079 -3.0 -8.6 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA compare
Pf6N2E2_4483 -2.9 -16.7 Ferric iron ABC transporter, iron-binding protein conserved
Pf6N2E2_4484 -2.8 -15.4 Ferric iron ABC transporter, permease protein conserved
Pf6N2E2_4357 -2.5 -11.5 Nucleoside-diphosphate-sugar epimerases conserved
Pf6N2E2_2391 -2.1 -8.5 FIG137360: hypothetical protein compare
Pf6N2E2_2133 -2.0 -6.4 Putative sulfate permease compare
Pf6N2E2_1239 -1.9 -6.4 Putative TEGT family carrier/transport protein compare
Pf6N2E2_5618 -1.9 -10.3 Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites conserved
Pf6N2E2_608 -1.8 -6.2 Transcriptional regulator of the arabinose operon in Shewanella, GntR family compare
Pf6N2E2_4413 -1.6 -7.1 FIG004064: hypothetical protein compare
Pf6N2E2_2853 -1.6 -5.7 Iron-regulated protein A precursor conserved
Pf6N2E2_5403 -1.5 -6.8 ABC transporter for D-Alanine, permease component 2 (from data) compare
Pf6N2E2_5617 -1.5 -5.1 Iron-regulated protein A precursor conserved
Pf6N2E2_2533 -1.5 -5.7 Rhodanese domain protein UPF0176 compare
Pf6N2E2_5404 -1.5 -6.4 ABC transporter for D-Alanine, permease component 1 (from data) compare
Pf6N2E2_2737 -1.4 -5.2 SAM-dependent methyltransferases compare
Pf6N2E2_5104 -1.4 -5.4 Conserved uncharacterized protein CreA compare
Pf6N2E2_4433 -1.3 -6.1 Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) compare
Pf6N2E2_4447 -1.3 -8.4 Cytochrome c family protein compare
Pf6N2E2_4091 -1.1 -5.2 Oligopeptidase A (EC 3.4.24.70) compare
Pf6N2E2_4887 +1.0 5.8 Bacterioferritin conserved
Pf6N2E2_3376 +1.0 6.0 Sodium-dependent transporter family protein compare
Pf6N2E2_3318 +1.2 5.1 putative non-ribosomal peptide synthetase compare
Pf6N2E2_6077 +1.3 5.9 Cysteine desulfurase (EC 2.8.1.7) compare
Pf6N2E2_2426 +1.6 8.8 Similar to ribosomal large subunit pseudouridine synthase A compare
Pf6N2E2_3918 +1.6 9.8 D-cysteine desulfhydrase (EC 4.4.1.15) conserved
Pf6N2E2_459 +1.6 7.0 Oxidoreductase, aldo/keto reductase family compare
Pf6N2E2_2470 +1.7 10.2 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) compare
Pf6N2E2_3944 +1.7 7.3 Protein of unknown function DUF81 compare
Pf6N2E2_5593 +2.0 6.3 Leucyl-tRNA synthetase compare
Pf6N2E2_4555 +2.1 12.6 Lysophospholipase (EC 3.1.1.5) compare
Pf6N2E2_4480 +2.1 13.6 Xaa-Pro aminopeptidase (EC 3.4.11.9) compare
Pf6N2E2_3317 +2.1 11.2 Ornithine cyclodeaminase (EC 4.3.1.12) compare
Pf6N2E2_3114 +2.1 8.7 Transcriptional regulator, TetR family compare
Pf6N2E2_4630 +2.2 6.0 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) compare
Pf6N2E2_5017 +2.5 5.2 Phosphate starvation-inducible protein PhoH, predicted ATPase conserved
Pf6N2E2_458 +3.4 16.4 Protein rarD compare
Pf6N2E2_2254 +3.7 5.4 Cell filamentation protein fic compare
Pf6N2E2_4795 +4.4 5.4 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY compare
Pf6N2E2_3152 +5.3 21.5 Magnesium and cobalt efflux protein CorC conserved
Pf6N2E2_3191 +5.6 7.9 Serine acetyltransferase (EC 2.3.1.30) conserved
Pf6N2E2_5274 +5.8 26.5 FolM Alternative dihydrofolate reductase 1 conserved


Specific phenotypes for stress Cobalt chloride hexahydrate across organisms