Experiment set11IT015 for Ralstonia sp. UNC404CL21Col

Compare to:

nitrogen source Sodium nitrite 1mM

200 most detrimental genes:

  gene name fitness t score description  
ABZR87_RS10550 +2.1 1.8 outer membrane protein assembly factor BamC compare
ABZR87_RS01285 +1.6 2.2 preprotein translocase subunit YajC compare
ABZR87_RS14080 +1.5 6.4 phosphate signaling complex protein PhoU compare
ABZR87_RS11760 +1.5 1.2 membrane protein compare
ABZR87_RS14665 +1.5 2.2 histidine phosphatase family protein compare
ABZR87_RS04995 +1.3 2.3 DNA topoisomerase III compare
ABZR87_RS14415 +1.3 1.9 hemin uptake protein HemP compare
ABZR87_RS18105 +1.3 1.9 hypothetical protein compare
ABZR87_RS14070 +1.2 9.4 phosphate regulon sensor histidine kinase PhoR compare
ABZR87_RS14085 +1.1 6.7 phosphate ABC transporter ATP-binding protein PstB compare
ABZR87_RS12120 +1.1 1.1 isocitrate lyase/phosphoenolpyruvate mutase family protein compare
ABZR87_RS07730 +1.1 2.3 lysophospholipid acyltransferase family protein compare
ABZR87_RS18400 +1.1 1.7 hypothetical protein compare
ABZR87_RS16720 +1.0 1.8 collagen-like triple helix repeat-containing protein compare
ABZR87_RS06030 +1.0 1.2 AraC family transcriptional regulator compare
ABZR87_RS00005 +1.0 2.1 hypothetical protein compare
ABZR87_RS11970 +1.0 1.3 hypothetical protein compare
ABZR87_RS10700 +0.9 5.2 C40 family peptidase compare
ABZR87_RS23380 +0.9 1.9 chemotaxis protein CheW compare
ABZR87_RS14375 +0.9 2.3 fumarate hydratase compare
ABZR87_RS20155 +0.9 3.8 type VI secretion system-associated protein TagF compare
ABZR87_RS03550 +0.9 2.4 response regulator transcription factor compare
ABZR87_RS14090 +0.9 4.6 phosphate ABC transporter permease PstA compare
ABZR87_RS12100 +0.9 1.7 DsbA family protein compare
ABZR87_RS22370 +0.9 1.1 four-helix bundle copper-binding protein compare
ABZR87_RS12065 +0.9 1.7 L-rhamnose mutarotase compare
ABZR87_RS14095 +0.8 2.9 phosphate ABC transporter permease PstC compare
ABZR87_RS07735 +0.8 2.6 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase compare
ABZR87_RS23295 +0.8 0.9 hypothetical protein compare
ABZR87_RS11650 +0.8 2.9 ribosomal protein S18-alanine N-acetyltransferase compare
ABZR87_RS20090 +0.8 2.1 universal stress protein compare
ABZR87_RS19565 +0.8 4.3 DUF3613 domain-containing protein compare
ABZR87_RS15715 +0.8 3.7 UTP--glucose-1-phosphate uridylyltransferase GalU compare
ABZR87_RS10275 +0.8 1.0 DUF5818 domain-containing protein compare
ABZR87_RS12660 +0.8 2.4 ABC transporter permease compare
ABZR87_RS13130 +0.8 3.1 ogr/Delta-like zinc finger family protein compare
ABZR87_RS20450 +0.8 1.1 HAD family phosphatase compare
ABZR87_RS13400 +0.8 0.9 hypothetical protein compare
ABZR87_RS10285 +0.8 4.2 FecR domain-containing protein compare
ABZR87_RS10870 +0.8 4.0 peptidoglycan DD-metalloendopeptidase family protein compare
ABZR87_RS11735 +0.8 1.3 chitin-binding domain-containing protein compare
ABZR87_RS10910 +0.8 1.2 RodZ family helix-turn-helix domain-containing protein compare
ABZR87_RS22060 +0.8 3.0 flagellar export protein FliJ compare
ABZR87_RS22405 +0.8 1.2 hypothetical protein compare
ABZR87_RS22520 +0.7 1.5 ABATE domain-containing protein compare
ABZR87_RS23095 +0.7 1.0 MarR family transcriptional regulator compare
ABZR87_RS07510 +0.7 2.2 LysR family transcriptional regulator compare
ABZR87_RS11420 +0.7 2.1 DegT/DnrJ/EryC1/StrS aminotransferase family protein compare
ABZR87_RS00765 +0.7 4.1 N-acetylmuramoyl-L-alanine amidase compare
ABZR87_RS18975 +0.7 1.1 entericidin A/B family lipoprotein compare
ABZR87_RS10280 +0.7 3.3 response regulator transcription factor compare
ABZR87_RS22840 +0.7 2.4 DUF2164 domain-containing protein compare
ABZR87_RS20730 +0.7 0.8 hypothetical protein compare
ABZR87_RS19555 +0.7 3.8 type II secretion system F family protein compare
ABZR87_RS05130 +0.7 0.7 CsbD family protein compare
ABZR87_RS02440 +0.7 4.0 twin-arginine translocase subunit TatC compare
ABZR87_RS03075 +0.7 4.1 AGE family epimerase/isomerase compare
ABZR87_RS11075 +0.7 1.2 hypothetical protein compare
ABZR87_RS00970 +0.7 0.7 molecular chaperone DnaJ compare
ABZR87_RS10195 +0.7 1.1 signal peptidase I compare
ABZR87_RS08045 +0.7 1.8 zinc-finger domain-containing protein compare
ABZR87_RS20160 +0.7 2.8 OmpA family protein compare
ABZR87_RS08750 +0.7 2.2 lipopolysaccharide heptosyltransferase I compare
ABZR87_RS07385 +0.7 0.9 HIT family protein compare
ABZR87_RS22645 +0.6 1.8 hypothetical protein compare
ABZR87_RS08165 +0.6 2.2 amidase compare
ABZR87_RS20370 +0.6 0.7 ABC transporter ATP-binding protein compare
ABZR87_RS19050 +0.6 3.1 glycosyltransferase family 39 protein compare
ABZR87_RS06370 +0.6 2.7 ferritin-like domain-containing protein compare
ABZR87_RS19740 +0.6 2.1 BON domain-containing protein compare
ABZR87_RS03780 +0.6 1.1 thiosulfate oxidation carrier protein SoxY compare
ABZR87_RS18655 +0.6 1.5 carbohydrate kinase compare
ABZR87_RS08555 +0.6 1.8 hypothetical protein compare
ABZR87_RS18315 +0.6 1.6 DUF971 domain-containing protein compare
ABZR87_RS16400 +0.6 1.3 LysR family transcriptional regulator compare
ABZR87_RS20825 +0.6 1.8 nuclear transport factor 2 family protein compare
ABZR87_RS22055 +0.6 1.3 flagellar hook-length control protein FliK compare
ABZR87_RS05495 +0.6 0.8 carboxymuconolactone decarboxylase family protein compare
ABZR87_RS17360 +0.6 3.4 glucan biosynthesis protein compare
ABZR87_RS02515 +0.6 1.1 BolA family protein compare
ABZR87_RS21700 +0.6 0.8 hypothetical protein compare
ABZR87_RS19370 +0.6 1.8 hypothetical protein compare
ABZR87_RS21460 +0.6 1.6 hypothetical protein compare
ABZR87_RS06090 +0.6 1.6 YoaK family protein compare
ABZR87_RS14100 +0.6 4.0 phosphate ABC transporter substrate-binding protein PstS compare
ABZR87_RS09970 +0.6 2.1 sugar ABC transporter substrate-binding protein compare
ABZR87_RS10955 +0.6 2.7 protease modulator HflC compare
ABZR87_RS10290 +0.6 2.5 CHASE2 domain-containing protein compare
ABZR87_RS15240 +0.6 1.0 YicC/YloC family endoribonuclease compare
ABZR87_RS22340 +0.6 0.9 hypothetical protein compare
ABZR87_RS14075 +0.6 2.2 phosphate regulon transcriptional regulator PhoB compare
ABZR87_RS05240 +0.6 1.7 FadR/GntR family transcriptional regulator compare
ABZR87_RS03785 +0.6 2.2 c-type cytochrome compare
ABZR87_RS08760 +0.6 1.8 META domain-containing protein compare
ABZR87_RS22000 +0.6 1.2 hypothetical protein compare
ABZR87_RS16185 +0.6 1.0 dCTP deaminase compare
ABZR87_RS18935 +0.5 2.5 TauD/TfdA family dioxygenase compare
ABZR87_RS10950 +0.5 3.5 FtsH protease activity modulator HflK compare
ABZR87_RS15290 +0.5 1.4 hypothetical protein compare
ABZR87_RS12200 +0.5 3.7 DUF2252 family protein compare
ABZR87_RS12510 +0.5 1.5 GNAT family N-acetyltransferase compare
ABZR87_RS01745 +0.5 1.6 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
ABZR87_RS10335 +0.5 2.9 aldose 1-epimerase compare
ABZR87_RS15450 +0.5 1.7 2-dehydropantoate 2-reductase compare
ABZR87_RS22115 +0.5 3.0 phytanoyl-CoA dioxygenase family protein compare
ABZR87_RS01660 +0.5 1.6 50S ribosomal protein L11 methyltransferase compare
ABZR87_RS00625 +0.5 1.1 hypothetical protein compare
ABZR87_RS12070 +0.5 1.1 porin compare
ABZR87_RS08525 +0.5 0.9 prepilin peptidase compare
ABZR87_RS19545 +0.5 3.1 CpaF family protein compare
ABZR87_RS01250 +0.5 1.5 hypothetical protein compare
ABZR87_RS17455 +0.5 1.6 AraC family transcriptional regulator compare
ABZR87_RS10985 +0.5 3.6 ribonuclease R compare
ABZR87_RS18735 +0.5 2.3 sulfite exporter TauE/SafE family protein compare
ABZR87_RS11460 +0.5 1.7 gephyrin-like molybdotransferase Glp compare
ABZR87_RS00565 +0.5 2.0 methylated-DNA--[protein]-cysteine S-methyltransferase compare
ABZR87_RS04695 +0.5 1.5 hypothetical protein compare
ABZR87_RS19980 +0.5 1.0 DUF1488 domain-containing protein compare
ABZR87_RS01455 +0.5 1.5 SDR family oxidoreductase compare
ABZR87_RS01895 +0.5 2.4 M23 family metallopeptidase compare
ABZR87_RS19170 +0.5 1.8 DMT family transporter compare
ABZR87_RS14050 +0.5 1.5 phosphohistidine phosphatase SixA compare
ABZR87_RS10240 +0.5 1.2 elongation factor P maturation arginine rhamnosyltransferase EarP compare
ABZR87_RS06900 +0.5 3.0 CmpA/NrtA family ABC transporter substrate-binding protein compare
ABZR87_RS02320 +0.5 1.0 cytochrome o ubiquinol oxidase subunit IV compare
ABZR87_RS06245 +0.5 2.2 YbaK/EbsC family protein compare
ABZR87_RS20880 +0.5 2.5 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
ABZR87_RS22010 +0.5 1.7 hypothetical protein compare
ABZR87_RS06960 +0.5 1.3 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD compare
ABZR87_RS00960 +0.5 2.4 ATP-binding cassette domain-containing protein compare
ABZR87_RS21230 +0.5 1.8 3-oxoadipate enol-lactonase compare
ABZR87_RS09235 +0.5 1.8 DUF3999 domain-containing protein compare
ABZR87_RS07350 +0.5 2.8 transporter compare
ABZR87_RS06745 +0.5 1.5 S41 family peptidase compare
ABZR87_RS18415 +0.5 0.8 hypothetical protein compare
ABZR87_RS04310 +0.5 1.2 2-dehydropantoate 2-reductase compare
ABZR87_RS02075 +0.5 0.7 23S ribosomal RNA compare
ABZR87_RS17100 +0.5 1.5 cupredoxin family protein compare
ABZR87_RS00690 +0.5 1.2 ester cyclase compare
ABZR87_RS20395 +0.5 1.9 acyl-CoA dehydrogenase family protein compare
ABZR87_RS08575 +0.5 2.8 response regulator compare
ABZR87_RS07990 +0.5 2.3 TerC family protein compare
ABZR87_RS22120 +0.5 2.9 class I SAM-dependent methyltransferase compare
ABZR87_RS10070 +0.5 1.2 gephyrin-like molybdotransferase Glp compare
ABZR87_RS01565 +0.5 3.2 NADP-dependent malic enzyme compare
ABZR87_RS11790 +0.5 1.4 cell division protein ZipA C-terminal FtsZ-binding domain-containing protein compare
ABZR87_RS03175 +0.5 2.2 hypothetical protein compare
ABZR87_RS10450 +0.5 1.0 alpha/beta hydrolase compare
ABZR87_RS19890 +0.5 2.3 efflux RND transporter periplasmic adaptor subunit compare
ABZR87_RS14330 +0.5 0.4 hypothetical protein compare
ABZR87_RS06100 +0.5 1.3 DoxX family protein compare
ABZR87_RS01470 +0.5 1.4 L-arabinose ABC transporter permease AraH compare
ABZR87_RS19285 +0.5 1.9 FHA domain-containing protein compare
ABZR87_RS10555 +0.5 2.3 MBL fold metallo-hydrolase compare
ABZR87_RS16550 +0.4 1.9 acyl-CoA dehydrogenase family protein compare
ABZR87_RS10875 +0.4 3.2 RNA polymerase sigma factor RpoS compare
ABZR87_RS07315 +0.4 2.4 hypothetical protein compare
ABZR87_RS11670 +0.4 2.2 DNA repair protein RadA compare
ABZR87_RS22285 +0.4 1.6 flagellar basal body rod protein FlgC compare
ABZR87_RS08585 +0.4 0.8 chemotaxis protein CheW compare
ABZR87_RS19165 +0.4 2.0 TerC family protein compare
ABZR87_RS18280 +0.4 1.6 cysteine hydrolase family protein compare
ABZR87_RS12960 +0.4 0.6 head completion/stabilization protein compare
ABZR87_RS02235 +0.4 2.5 response regulator compare
ABZR87_RS12410 +0.4 1.7 LysR substrate-binding domain-containing protein compare
ABZR87_RS12815 +0.4 1.9 siderophore ferric iron reductase compare
ABZR87_RS04105 +0.4 1.0 ATP synthase subunit I compare
ABZR87_RS10800 +0.4 0.7 YbaB/EbfC family nucleoid-associated protein compare
ABZR87_RS22415 +0.4 1.0 universal stress protein compare
ABZR87_RS08950 +0.4 1.7 transcriptional regulator NrdR compare
ABZR87_RS01695 +0.4 1.9 collagen-like triple helix repeat-containing protein compare
ABZR87_RS19560 +0.4 2.0 lipoprotein compare
ABZR87_RS08040 +0.4 1.9 lipopolysaccharide heptosyltransferase II compare
ABZR87_RS09120 +0.4 1.7 arylformamidase compare
ABZR87_RS02665 +0.4 1.5 ATP-binding protein compare
ABZR87_RS08410 +0.4 0.8 hypothetical protein compare
ABZR87_RS13045 +0.4 1.5 phage tail assembly protein compare
ABZR87_RS13090 +0.4 2.1 hypothetical protein compare
ABZR87_RS15380 +0.4 0.9 SDR family oxidoreductase compare
ABZR87_RS01510 +0.4 0.9 YidB family protein compare
ABZR87_RS20640 +0.4 2.1 VOC family protein compare
ABZR87_RS01370 +0.4 2.9 ATP-binding protein compare
ABZR87_RS23360 +0.4 0.6 chemotaxis response regulator protein-glutamate methylesterase compare
ABZR87_RS07780 +0.4 2.5 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB compare
ABZR87_RS23465 +0.4 2.4 malonate transporter subunit MadM compare
ABZR87_RS22220 +0.4 1.6 flagellar biosynthetic protein FliR compare
ABZR87_RS12775 +0.4 1.4 tRNA-Val compare
ABZR87_RS06200 +0.4 1.8 acyl-CoA dehydrogenase family protein compare
ABZR87_RS15665 +0.4 2.2 ZIP family metal transporter compare
ABZR87_RS12645 +0.4 2.3 BolA family transcriptional regulator compare
ABZR87_RS15015 +0.4 2.0 group II truncated hemoglobin compare
ABZR87_RS17545 +0.4 2.7 MFS transporter compare
ABZR87_RS01375 +0.4 2.5 two-component system hybrid sensor histidine kinase/response regulator PhcR compare
ABZR87_RS21155 +0.4 1.6 branched-chain amino acid ABC transporter permease compare
ABZR87_RS18860 +0.4 1.1 hypothetical protein compare
ABZR87_RS13215 +0.4 2.3 ATP-binding protein compare
ABZR87_RS17235 +0.4 1.7 alkyl hydroperoxide reductase subunit C compare
ABZR87_RS12740 +0.4 2.4 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase compare
ABZR87_RS21615 +0.4 1.6 response regulator compare
ABZR87_RS10650 +0.4 1.4 DNA-3-methyladenine glycosylase compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source Sodium nitrite in Ralstonia sp. UNC404CL21Col

For nitrogen source Sodium nitrite across organisms