Experiment set11IT014 for Pseudomonas fluorescens SBW25-INTG

Compare to:

p-Coumaric acid (C) and Ammonium chloride (N); with TAPS

Genes with specific phenotypes:

  gene name fitness t score description  
PFLU_RS14730 -5.1 -6.1 response regulator compare
PFLU_RS13560 -5.0 -6.9 TSUP family transporter compare
PFLU_RS07250 -4.5 -16.2 M48 family metallopeptidase compare
PFLU_RS18920 -4.3 -18.8 outer membrane protein assembly factor compare
PFLU_RS12025 -4.2 -6.1 crotonase/enoyl-CoA hydratase family protein compare
PFLU_RS18915 -4.2 -13.9 translocation/assembly module TamB compare
PFLU_RS27490 -3.7 -17.1 YeaH/YhbH family protein compare
PFLU_RS13065 -3.6 -6.8 ser/threonine protein phosphatase compare
PFLU_RS27495 -3.5 -18.9 SpoVR family protein compare
PFLU_RS14725 -3.4 -8.4 hybrid sensor histidine kinase/response regulator compare
PFLU_RS13480 -3.3 -13.6 maltose alpha-D-glucosyltransferase compare
PFLU_RS27485 -3.0 -16.4 PrkA family serine protein kinase compare
PFLU_RS23125 -2.8 -14.2 HAMP domain-containing protein compare
PFLU_RS05665 -2.7 -10.8 aquaporin compare
PFLU_RS15395 -2.6 -10.5 alpha-D-glucose phosphate-specific phosphoglucomutase compare
PFLU_RS12830 -2.5 -9.4 PAS domain-containing protein compare
PFLU_RS23285 -2.4 -6.4 succinylglutamate desuccinylase compare
PFLU_RS26525 -2.4 -14.7 hybrid sensor histidine kinase/response regulator compare
PFLU_RS22320 -2.3 -11.6 cytochrome-c oxidase, cbb3-type subunit I compare
PFLU_RS03735 -2.2 -6.6 NAD(P)/FAD-dependent oxidoreductase compare
PFLU_RS05645 -1.9 -5.3 glutamate/aspartate ABC transporter substrate-binding protein compare
PFLU_RS08700 -1.9 -7.9 MFS transporter compare
PFLU_RS18165 -1.9 -7.8 transketolase compare
PFLU_RS21895 -1.9 -5.2 DMT family transporter compare
PFLU_RS13290 -1.8 -6.0 response regulator transcription factor compare
PFLU_RS21745 -1.8 -10.1 fused response regulator/phosphatase compare
PFLU_RS12485 -1.7 -12.5 non-ribosomal peptide synthetase compare
PFLU_RS04005 -1.7 -6.2 catabolite repressor/activator compare
PFLU_RS06095 -1.7 -5.3 alpha/beta hydrolase compare
PFLU_RS26305 -1.6 -5.8 tRNA (uridine(54)-C5)-methyltransferase TrmA compare
PFLU_RS26820 -1.6 -5.4 NAD(P)H-dependent oxidoreductase compare
PFLU_RS26415 -1.6 -6.0 histone deacetylase compare
PFLU_RS12480 -1.5 -10.9 non-ribosomal peptide synthetase compare
PFLU_RS00370 -1.4 -6.7 zinc ABC transporter ATP-binding protein ZnuC compare
PFLU_RS13140 -1.4 -6.0 glucose-6-phosphate dehydrogenase compare
PFLU_RS05625 -1.3 -5.1 sensor histidine kinase compare
PFLU_RS13245 -1.2 -5.0 MFS transporter compare
PFLU_RS04350 -1.1 -5.9 metalloprotease PmbA compare
PFLU_RS07700 -1.1 -6.6 DEAD/DEAH box helicase compare
PFLU_RS08610 -1.1 -5.3 pseudouridine synthase compare
PFLU_RS00570 -1.1 -6.1 CoA transferase compare
PFLU_RS28780 +1.1 7.0 aspartate aminotransferase family protein compare
PFLU_RS20455 +1.1 6.5 DUF979 domain-containing protein compare
PFLU_RS13280 +1.2 8.0 multidrug efflux RND transporter permease subunit compare
PFLU_RS31045 +1.2 5.4 ribosome modulation factor compare
PFLU_RS13495 +1.3 8.6 response regulator compare
PFLU_RS18975 +1.3 7.8 gamma-carboxygeranoyl-CoA hydratase compare
PFLU_RS21790 +1.3 6.8 PAS domain-containing protein compare
PFLU_RS07565 +1.4 5.8 biotin-dependent carboxyltransferase compare
PFLU_RS04395 +1.5 5.6 ribosome-associated translation inhibitor RaiA compare
PFLU_RS02630 +1.5 5.7 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB compare
PFLU_RS13295 +1.5 7.1 HAMP domain-containing protein compare
PFLU_RS07555 +1.5 10.2 LamB/YcsF family protein compare
PFLU_RS01730 +1.6 11.1 glycogen/starch/alpha-glucan phosphorylase compare
PFLU_RS23260 +1.6 6.7 carbon storage regulator CsrA compare
PFLU_RS05145 +1.8 12.2 HPF/RaiA family ribosome-associated protein compare
PFLU_RS21800 +2.1 11.6 flagellar assembly protein FliT compare
PFLU_RS04345 +2.3 9.6 ribosome-associated protein compare
PFLU_RS04055 +2.4 10.1 ABC transporter permease compare
PFLU_RS04135 +2.4 14.3 HAMP domain-containing histidine kinase compare
PFLU_RS04050 +2.7 12.7 ABC transporter ATP-binding protein compare
PFLU_RS04060 +2.8 13.6 glycine betaine ABC transporter substrate-binding protein compare
PFLU_RS02645 +2.8 16.2 hypothetical protein compare
PFLU_RS04065 +3.0 10.9 ABC transporter permease compare


Specific phenotypes for stress p-Coumaric acid across organisms