Experiment set11IT013 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Acacetin 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_0951 -5.0 -3.4 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4340 -4.1 -8.2 phosphomethylpyrimidine kinase, putative compare
Psyr_1544 -3.9 -4.6 SirA-like protein compare
Psyr_1556 -3.8 -3.6 hypothetical protein compare
Psyr_4203 -2.9 -2.8 SsrA-binding protein compare
Psyr_4687 -2.9 -7.5 biotin synthase compare
Psyr_4341 -2.7 -8.3 thiamine-phosphate diphosphorylase compare
Psyr_4991 -2.7 -3.6 hypothetical protein compare
Psyr_4740 -2.6 -6.7 thiazole-phosphate synthase compare
Psyr_1613 -2.6 -4.9 septum site-determining protein MinC compare
Psyr_3008 -2.5 -8.1 Undecaprenyl-diphosphatase compare
Psyr_0475 -2.5 -2.4 Protein of unknown function YGGT compare
Psyr_4580 -2.4 -3.2 anthranilate phosphoribosyltransferase compare
Psyr_4686 -2.3 -6.6 8-amino-7-oxononanoate synthase compare
Psyr_4683 -2.3 -4.8 dethiobiotin synthase compare
Psyr_0849 -2.2 -10.0 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_4091 -2.1 -3.9 8-oxo-dGTPase compare
Psyr_0565 -2.0 -6.0 Protein of unknown function UPF0126 compare
Psyr_3208 -2.0 -3.0 NADH dehydrogenase subunit M compare
Psyr_4684 -1.9 -3.4 biotin synthesis protein BioC compare
Psyr_1663 -1.9 -3.4 phosphoribosylanthranilate isomerase compare
Psyr_0574 -1.9 -5.4 protease FtsH subunit HflK compare
Psyr_0918 -1.8 -10.6 ABC transporter compare
Psyr_0917 -1.8 -9.3 ABC-2 compare
Psyr_0826 -1.7 -7.0 glucose-6-phosphate isomerase compare
Psyr_4581 -1.7 -2.8 anthranilate synthase, component II compare
Psyr_0454 -1.7 -5.3 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_2980 -1.6 -3.5 UDP-glucose pyrophosphorylase compare
Psyr_0383 -1.6 -1.9 Twin-arginine translocation protein TatB compare
Psyr_3954 -1.6 -4.2 GTP-binding protein LepA compare
Psyr_3808 -1.6 -1.7 hypothetical protein compare
Psyr_1408 -1.6 -3.7 Holliday junction endonuclease RuvC compare
Psyr_0529 -1.6 -4.9 Glycosyl transferase, group 1 compare
Psyr_1227 -1.6 -3.4 Queuosine biosynthesis protein compare
Psyr_1751 -1.6 -4.6 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_4622 -1.5 -5.1 Nucleotidyl transferase compare
Psyr_4460 -1.5 -2.0 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_5132 -1.5 -3.4 Glucose-inhibited division protein A subfamily compare
Psyr_2854 -1.4 -4.2 conserved hypothetical protein compare
Psyr_1907 -1.4 -2.7 GTP cyclohydrolase I compare
Psyr_2312 -1.4 -1.9 Protein of unknown function DUF24 compare
Psyr_0575 -1.4 -3.3 protease FtsH subunit HflC compare
Psyr_2471 -1.3 -2.3 hydroxymethylglutaryl-CoA lyase compare
Psyr_2848 -1.3 -3.6 hypothetical protein compare
Psyr_4115 -1.3 -2.0 phosphoheptose isomerase compare
Psyr_1667 -1.3 -3.4 Colicin V production protein compare
Psyr_3290 -1.3 -3.7 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_4634 -1.3 -1.9 Polynucleotide adenylyltransferase:Metal-dependent phosphohydrolase, HD subdomain protein compare
Psyr_2285 -1.3 -2.3 Twin-arginine translocation pathway signal compare
Psyr_4822 -1.3 -2.7 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_4716 -1.2 -3.5 Sarcosine oxidase, gamma subunit, heterotetrameric compare
Psyr_2462 -1.2 -3.6 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_0282 -1.2 -4.3 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0487 -1.2 -1.9 glutathione synthase compare
Psyr_1975 -1.2 -2.9 Integrase, catalytic region compare
Psyr_4089 -1.2 -4.4 PAS compare
Psyr_4884 -1.2 -4.1 Rhodanese-like protein compare
Psyr_0255 -1.2 -1.9 glutamate-cysteine ligase compare
Psyr_0034 -1.2 -0.8 tryptophan synthase, beta chain compare
Psyr_4860 -1.1 -1.6 Integrase, catalytic region compare
Psyr_4362 -1.1 -3.0 Rare lipoprotein A compare
Psyr_1555 -1.1 -2.9 Cobyrinic acid a,c-diamide synthase compare
Psyr_2973 -1.1 -1.9 Glyoxalase I compare
Psyr_3806 -1.1 -3.8 hypothetical protein compare
Psyr_2769 -1.1 -3.3 conserved hypothetical protein compare
Psyr_3419 -1.1 -3.6 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_4609 -1.1 -6.9 anthranilate synthase, component I compare
Psyr_3193 -1.1 -2.0 Transcription factor jumonji, jmjC compare
Psyr_0927 -1.0 -3.9 hypothetical protein compare
Psyr_2739 -1.0 -2.0 ThiJ/PfpI compare
Psyr_3289 -1.0 -2.6 3-ketoacyl-CoA thiolase compare
Psyr_4736 -1.0 -2.8 conserved hypothetical protein compare
Psyr_3104 -1.0 -2.7 phosphate ABC transporter membrane protein 2, PhoT family compare
Psyr_1802 -1.0 -1.9 transcriptional regulator, AsnC family compare
Psyr_4519 -1.0 -5.5 General substrate transporter:Major facilitator superfamily compare
Psyr_0831 -1.0 -1.9 Two-component response regulator CbrB compare
Psyr_1864 -1.0 -2.6 spermidine synthase compare
Psyr_0259 -1.0 -1.9 Osmolarity sensor protein envZ compare
Psyr_0464 -1.0 -1.6 hypothetical protein compare
Psyr_1094 -1.0 -2.5 cold-shock DNA-binding protein family compare
Psyr_0941 -1.0 -5.1 Conserved hypothetical protein 92 compare
Psyr_1530 -1.0 -2.0 hypothetical protein compare
Psyr_3665 -1.0 -2.4 conserved hypothetical protein compare
Psyr_1748 -1.0 -3.5 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_3121 -1.0 -2.6 Protein of unknown function DUF1345 compare
Psyr_3293 -1.0 -2.5 UspA compare
Psyr_4194 -1.0 -3.1 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_0579 -0.9 -6.6 RNAse R compare
Psyr_0680 -0.9 -2.3 DNA helicase/exodeoxyribonuclease V, gamma subunit compare
Psyr_4278 -0.9 -1.4 regulatory protein, LuxR compare
Psyr_3202 -0.9 -1.5 NADH dehydrogenase subunit G compare
Psyr_4380 -0.9 -2.5 translation initiation factor 1 (eIF-1/SUI1) compare
Psyr_0406 -0.9 -4.0 Pilus assembly protein, PilQ compare
Psyr_1588 -0.9 -1.8 Putative exonuclease, RdgC compare
Psyr_2092 -0.9 -1.6 Protein of unknown function 1935 compare
Psyr_0281 -0.9 -2.8 ABC transporter compare
Psyr_1371 -0.9 -4.5 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_2840 -0.9 -1.8 hypothetical protein compare
Psyr_2200 -0.9 -1.5 UreE urease accessory, N-terminal compare
Psyr_2826 -0.9 -2.3 hypothetical protein compare
Psyr_1832 -0.9 -2.5 Exonuclease compare
Psyr_4019 -0.8 -2.4 H-NS family protein MvaT compare
Psyr_2990 -0.8 -1.7 conserved hypothetical protein compare
Psyr_2360 -0.8 -1.8 CBS compare
Psyr_2071 -0.8 -1.0 outer membrane lipoprotein OprI compare
Psyr_3581 -0.8 -3.3 ribosomal large subunit pseudouridine synthase B compare
Psyr_2899 -0.8 -3.4 conserved hypothetical protein compare
Psyr_4136 -0.8 -1.8 BolA-like protein compare
Psyr_0549 -0.8 -1.5 Metallophosphoesterase compare
Psyr_3240 -0.8 -2.4 CTP synthase compare
Psyr_2249 -0.8 -2.3 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1039 -0.8 -1.4 FecR protein compare
Psyr_2327 -0.8 -2.3 GTP cyclohydrolase subunit MoaA compare
Psyr_1747 -0.8 -2.4 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_3040 -0.8 -2.3 conserved hypothetical protein compare
Psyr_3174 -0.8 -3.2 uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase compare
Psyr_2346 -0.8 -2.7 conserved hypothetical protein compare
Psyr_1097 -0.8 -1.3 glycine cleavage system H protein compare
Psyr_4464 -0.8 -1.1 lipoprotein, putative compare
Psyr_4887 -0.8 -4.8 Peptidase S41A, C-terminal protease compare
Psyr_0907 -0.8 -2.0 conserved hypothetical protein compare
Psyr_4512 -0.7 -3.5 putative phage-related protein compare
Psyr_0493 -0.7 -1.5 CheW-like protein compare
Psyr_1418 -0.7 -1.6 Radical SAM compare
Psyr_2143 -0.7 -1.3 delta1-piperideine 2-carboxylate reductase compare
Psyr_4754 -0.7 -1.7 16S rRNA m(2)G-966 methyltransferase compare
Psyr_4476 -0.7 -3.0 dTDP-4-dehydrorhamnose reductase compare
Psyr_3583 -0.7 -2.3 condensin subunit ScpB compare
Psyr_0923 -0.7 -3.4 hypothetical protein compare
Psyr_0303 -0.7 -1.9 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_4893 -0.7 -1.4 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_4830 -0.7 -1.9 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3018 -0.7 -2.5 membrane protein, putative compare
Psyr_0184 -0.7 -1.6 Protein of unknown function DUF484 compare
Psyr_2639 -0.7 -3.8 hypothetical protein compare
Psyr_1650 -0.7 -1.4 aminodeoxychorismate lyase apoprotein compare
Psyr_4480 -0.7 -1.9 outer membrane transport energization protein TonB compare
Psyr_1931 -0.7 -3.1 hypothetical protein compare
Psyr_2065 -0.7 -2.3 transcription elongation factor GreB compare
Psyr_1212 -0.7 -2.0 type III secretion protein HrpO compare
Psyr_3337 -0.7 -1.7 gluconate kinase, SKI family compare
Psyr_2642 -0.7 -2.1 hypothetical protein compare
Psyr_2738 -0.7 -2.9 regulatory protein, LysR compare
Psyr_2202 -0.7 -1.6 ABC transporter compare
Psyr_3807 -0.7 -2.8 hypothetical protein compare
Psyr_1190 -0.7 -2.5 type III transcriptional regulator HrpR compare
Psyr_4566 -0.7 -4.0 Peptidase M23B compare
Psyr_3116 -0.7 -1.7 transcriptional regulator, CdaR family compare
Psyr_0060 -0.7 -2.7 Protein of unknown function DUF513 compare
Psyr_1250 -0.7 -2.2 conserved hypothetical protein compare
Psyr_2982 -0.7 -2.2 conserved hypothetical protein compare
Psyr_2160 -0.7 -2.0 cold-shock DNA-binding protein family compare
Psyr_0947 -0.6 -3.4 TPR repeat protein:TPR repeat protein compare
Psyr_2154 -0.6 -2.8 transcriptional regulator, LacI family compare
Psyr_2837 -0.6 -4.3 hypothetical protein compare
Psyr_1806 -0.6 -1.8 Ureidoglycolate hydrolase compare
Psyr_2180 -0.6 -1.3 transcriptional regulator, LysR family compare
Psyr_1930 -0.6 -1.8 hypothetical protein compare
Psyr_1317 -0.6 -1.1 conserved hypothetical protein compare
Psyr_5065 -0.6 -3.6 ATP-dependent DNA helicase UvrD compare
Psyr_2087 -0.6 -2.9 aconitase / 2-methylcitrate dehydratase (trans-methylaconitate-forming) compare
Psyr_1404 -0.6 -4.0 Ferritin and Dps compare
Psyr_2347 -0.6 -1.1 hypothetical protein compare
Psyr_3199 -0.6 -1.6 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_2592 -0.6 -2.6 transport system permease protein compare
Psyr_5130 -0.6 -3.6 chromosome segregation ATPase compare
Psyr_1947 -0.6 -0.9 MbtH-like protein compare
Psyr_2272 -0.6 -2.1 Helix-turn-helix motif protein compare
Psyr_0119 -0.6 -2.2 CDS compare
Psyr_2770 -0.6 -2.9 tail fiber domain protein compare
Psyr_2345 -0.6 -2.3 ea59 protein compare
Psyr_0404 -0.6 -2.1 Fimbrial assembly compare
Psyr_0774 -0.6 -1.5 monosaccharide ABC transporter membrane protein, CUT2 family compare
Psyr_2999 -0.6 -2.2 LmbE-like protein compare
Psyr_3258 -0.6 -1.6 conserved hypothetical protein compare
Psyr_5073 -0.6 -2.7 conserved hypothetical protein compare
Psyr_0491 -0.6 -2.0 chemotaxis sensory transducer compare
Psyr_3476 -0.6 -1.8 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_3728 -0.6 -2.2 hypothetical protein compare
Psyr_4093 -0.6 -2.5 glutamate N-acetyltransferase compare
Psyr_2171 -0.6 -1.6 HpcH/HpaI aldolase compare
Psyr_0792 -0.6 -2.2 conserved hypothetical protein compare
Psyr_2771 -0.6 -3.1 conserved domain protein compare
Psyr_2880 -0.6 -3.1 conserved hypothetical protein compare
Psyr_3088 -0.6 -2.2 Glycosyl transferase, group 1 compare
Psyr_2765 -0.6 -1.6 conserved domain protein compare
Psyr_0919 -0.6 -4.0 Chromosome segregation ATPase-like protein compare
Psyr_1268 -0.6 -3.1 extracellular solute-binding protein, family 3:SLT compare
Psyr_1968 -0.6 -1.1 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_1372 -0.6 -2.4 Protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psyr_4408 -0.6 -3.3 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_0169 -0.6 -2.4 Hsp33 protein compare
Psyr_0827 -0.6 -2.0 pantothenate synthetase compare
Psyr_3429 -0.6 -1.2 CheW-like protein compare
Psyr_0386 -0.6 -2.4 phosphoribosyl-AMP cyclohydrolase compare
Psyr_4062 -0.6 -1.3 Pyridoxamine 5'-phosphate oxidase-related protein compare
Psyr_3213 -0.6 -1.1 Propeptide, PepSY amd peptidase M4 compare
Psyr_3439 -0.6 -2.4 GTP-binding signal recognition particle SRP54, G-domain protein compare
Psyr_2833 -0.6 -1.6 CDS compare
Psyr_1749 -0.6 -3.1 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Acacetin across organisms