Experiment set11IT008 for Burkholderia phytofirmans PsJN

Compare to:

D-Glucose carbon source

200 most important genes:

  gene name fitness t score description  
BPHYT_RS17395 -6.1 -1.7 anthranilate synthase subunit II compare
BPHYT_RS09500 -5.3 -8.1 glucose-6-phosphate isomerase compare
BPHYT_RS12985 -4.4 -2.4 amino acid acetyltransferase compare
BPHYT_RS15075 -4.3 -2.0 dihydrokaempferol 4-reductase compare
BPHYT_RS09860 -4.3 -1.1 pilus assembly protein PilP compare
BPHYT_RS14895 -3.7 -4.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
BPHYT_RS16290 -3.6 -1.0 hypothetical protein compare
BPHYT_RS08955 -3.6 -3.8 homoserine dehydrogenase compare
BPHYT_RS16270 -3.6 -3.2 phosphoglycerate kinase compare
BPHYT_RS08565 -3.5 -1.3 dihydroorotate dehydrogenase compare
BPHYT_RS16675 -3.5 -2.1 dihydroorotase compare
BPHYT_RS12530 -3.2 -5.4 ATP phosphoribosyltransferase regulatory subunit compare
BPHYT_RS25875 -3.2 -1.2 type III secretion protein compare
BPHYT_RS05025 -3.1 -3.8 sugar ABC transporter substrate-binding protein compare
BPHYT_RS08765 -3.1 -0.8 ABC transporter ATP-binding protein compare
BPHYT_RS33875 -3.0 -6.1 tryptophan synthase subunit alpha compare
BPHYT_RS26775 -3.0 -1.0 chemotaxis protein CheB compare
BPHYT_RS15015 -3.0 -1.0 ArsR family transcriptional regulator compare
BPHYT_RS04725 -2.9 -6.0 sulfite reductase compare
BPHYT_RS25970 -2.9 -1.1 urea amidolyase compare
BPHYT_RS16835 -2.9 -4.5 glyceraldehyde-3-phosphate dehydrogenase compare
BPHYT_RS20840 -2.9 -1.9 beta-lactamase compare
BPHYT_RS02965 -2.9 -2.7 membrane protein compare
BPHYT_RS18910 -2.8 -1.8 FlgN compare
BPHYT_RS06545 -2.8 -8.5 acetolactate synthase compare
BPHYT_RS15915 -2.8 -8.1 ornithine carbamoyltransferase compare
BPHYT_RS17405 -2.7 -1.0 indole-3-glycerol phosphate synthase compare
BPHYT_RS06405 -2.7 -6.4 phosphoribosylamine--glycine ligase compare
BPHYT_RS05035 -2.7 -5.4 sugar ABC transporter permease compare
BPHYT_RS12845 -2.7 -14.3 ATPase compare
BPHYT_RS04285 -2.7 -1.7 rhamnosyltransferase compare
BPHYT_RS18320 -2.7 -8.2 orotate phosphoribosyltransferase compare
BPHYT_RS03150 -2.6 -13.1 Phosphoglycerate dehydrogenase (EC:1.1.1.95) (from data) compare
BPHYT_RS22265 -2.6 -1.0 hypothetical protein compare
BPHYT_RS05010 -2.6 -3.4 RpiR family transcriptional regulator compare
BPHYT_RS16255 -2.6 -5.4 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
BPHYT_RS04965 -2.6 -6.1 ATP-binding protein compare
BPHYT_RS14910 -2.6 -5.4 chorismate mutase compare
BPHYT_RS08415 -2.6 -1.1 hypothetical protein compare
BPHYT_RS16840 -2.6 -2.5 transketolase compare
BPHYT_RS13705 -2.5 -3.5 chorismate synthase compare
BPHYT_RS29520 -2.5 -0.9 hypothetical protein compare
BPHYT_RS10165 -2.5 -1.3 transcriptional regulator compare
BPHYT_RS33840 -2.5 -6.7 amidophosphoribosyltransferase compare
BPHYT_RS03625 -2.5 -8.3 Histidinol-phosphatase (EC:3.1.3.15) (from data) compare
BPHYT_RS16905 -2.5 -3.7 orotidine 5'-phosphate decarboxylase compare
BPHYT_RS14190 -2.5 -7.0 carbamoyl phosphate synthase large subunit compare
BPHYT_RS25800 -2.4 -1.8 sugar ABC transporter permease compare
BPHYT_RS33880 -2.4 -6.7 N-(5'-phosphoribosyl)anthranilate isomerase compare
BPHYT_RS04740 -2.4 -5.4 sulfate adenylyltransferase subunit 2 compare
BPHYT_RS33835 -2.4 -7.0 O-succinylhomoserine sulfhydrylase compare
BPHYT_RS16245 -2.4 -3.6 phosphoribosylaminoimidazole carboxylase compare
BPHYT_RS09160 -2.4 -5.3 polyhydroxyalkanoate synthesis repressor PhaR compare
BPHYT_RS03015 -2.4 -1.1 aldolase compare
BPHYT_RS06975 -2.4 -2.0 glutamate racemase compare
BPHYT_RS15920 -2.3 -7.0 argininosuccinate synthase compare
BPHYT_RS05020 -2.3 -4.5 glucose-6-phosphate 1-dehydrogenase compare
BPHYT_RS29865 -2.3 -1.7 sugar transferase compare
BPHYT_RS11795 -2.3 -1.3 membrane protein compare
BPHYT_RS17675 -2.3 -1.9 phosphoribosyl-AMP cyclohydrolase compare
BPHYT_RS33900 -2.3 -7.9 3-isopropylmalate dehydrogenase compare
BPHYT_RS14845 -2.2 -1.3 cysteine synthase compare
BPHYT_RS01590 -2.2 -3.3 methionine biosynthesis protein MetW compare
BPHYT_RS17670 -2.2 -3.1 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
BPHYT_RS30490 -2.2 -0.8 2-haloalkanoic acid dehalogenase compare
BPHYT_RS10100 -2.2 -2.8 dihydroxy-acid dehydratase compare
BPHYT_RS28360 -2.2 -1.2 carboxymuconolactone decarboxylase compare
BPHYT_RS17685 -2.2 -5.5 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
BPHYT_RS17855 -2.2 -9.9 glutamate synthase compare
BPHYT_RS09515 -2.2 -2.5 phosphoribosylformylglycinamidine synthase compare
BPHYT_RS17680 -2.2 -2.5 imidazole glycerol phosphate synthase subunit HisF compare
BPHYT_RS04730 -2.2 -4.0 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
BPHYT_RS33645 -2.2 -6.4 homoserine kinase compare
BPHYT_RS06900 -2.1 -4.3 aspartate aminotransferase compare
BPHYT_RS17715 -2.1 -5.2 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
BPHYT_RS02365 -2.1 -0.9 hypothetical protein compare
BPHYT_RS17700 -2.1 -4.1 imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) (from data) compare
BPHYT_RS33805 -2.1 -0.8 hypothetical protein compare
BPHYT_RS29920 -2.1 -0.9 hypothetical protein compare
BPHYT_RS05030 -2.1 -1.6 sugar ABC transporter permease compare
BPHYT_RS34295 -2.1 -0.9 fimbrial protein compare
BPHYT_RS17390 -2.1 -8.9 anthranilate synthase subunit I compare
BPHYT_RS01595 -2.1 -7.0 homoserine O-acetyltransferase compare
BPHYT_RS04455 -2.1 -1.0 glycosyl transferase compare
BPHYT_RS33865 -2.1 -5.2 tryptophan synthase alpha chain compare
BPHYT_RS30825 -2.0 -1.9 extradiol dioxygenase compare
BPHYT_RS04720 -2.0 -7.4 transcriptional regulator compare
BPHYT_RS16735 -2.0 -4.2 phosphogluconate dehydratase compare
BPHYT_RS03725 -2.0 -0.9 serine hydroxymethyltransferase compare
BPHYT_RS04920 -2.0 -2.1 aspartate 1-decarboxylase compare
BPHYT_RS10135 -2.0 -1.0 hypothetical protein compare
BPHYT_RS06375 -2.0 -5.0 ribonuclease compare
BPHYT_RS23395 -2.0 -1.4 glycosyl transferase compare
BPHYT_RS06530 -2.0 -2.4 membrane protein compare
BPHYT_RS09850 -2.0 -1.7 molybdopterin oxidoreductase compare
BPHYT_RS28830 -1.9 -0.9 LysR family transcriptional regulator compare
BPHYT_RS04745 -1.9 -3.5 sulfate adenylyltransferase compare
BPHYT_RS31440 -1.9 -2.1 hypothetical protein compare
BPHYT_RS20070 -1.9 -2.5 hypothetical protein compare
BPHYT_RS06045 -1.9 -4.2 transaldolase compare
BPHYT_RS33030 -1.9 -1.0 hypothetical protein compare
BPHYT_RS06555 -1.8 -5.2 ketol-acid reductoisomerase compare
BPHYT_RS17690 -1.8 -6.2 imidazole glycerol phosphate synthase compare
BPHYT_RS00380 -1.8 -1.8 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BPHYT_RS12840 -1.8 -3.3 pyruvate dehydrogenase compare
BPHYT_RS05225 -1.8 -6.0 phosphoenolpyruvate carboxylase compare
BPHYT_RS08250 -1.8 -2.0 hypothetical protein compare
BPHYT_RS33915 -1.8 -3.6 isopropylmalate isomerase compare
BPHYT_RS07570 -1.8 -0.9 hypothetical protein compare
BPHYT_RS08960 -1.8 -1.3 threonine synthase compare
BPHYT_RS14915 -1.8 -5.5 phosphoserine aminotransferase compare
BPHYT_RS29945 -1.7 -2.0 histidine kinase compare
BPHYT_RS22815 -1.7 -1.5 TonB-denpendent receptor compare
BPHYT_RS04955 -1.7 -1.5 methionyl-tRNA synthetase compare
BPHYT_RS28705 -1.7 -1.2 IclR family transcriptional regulator compare
BPHYT_RS09465 -1.7 -1.3 transcriptional regulator compare
BPHYT_RS34400 -1.7 -2.0 hypothetical protein compare
BPHYT_RS15650 -1.7 -6.4 quinolinate synthetase compare
BPHYT_RS23230 -1.7 -1.1 histidine kinase compare
BPHYT_RS24010 -1.7 -1.8 L-histidine ABC transporter, permease component 2 (from data) compare
BPHYT_RS17890 -1.7 -1.1 shikimate kinase compare
BPHYT_RS33845 -1.7 -2.6 bacteriocin production protein compare
BPHYT_RS15645 -1.7 -3.8 nicotinate-nucleotide pyrophosphorylase compare
BPHYT_RS15490 -1.7 -5.4 coproporphyrinogen III oxidase conserved
BPHYT_RS05290 -1.6 -0.9 hypothetical protein compare
BPHYT_RS12465 -1.6 -2.0 inositol monophosphatase compare
BPHYT_RS02865 -1.6 -2.1 hypothetical protein compare
BPHYT_RS12550 -1.6 -0.9 GTP-binding protein HflX compare
BPHYT_RS17400 -1.6 -2.7 anthranilate phosphoribosyltransferase compare
BPHYT_RS02610 -1.6 -3.8 glycerol-3-phosphate dehydrogenase [NAD(P)+] compare
BPHYT_RS00295 -1.6 -2.3 hypothetical protein compare
BPHYT_RS09620 -1.6 -2.3 aminodeoxychorismate lyase compare
BPHYT_RS23860 -1.6 -2.8 malonic semialdehyde reductase compare
BPHYT_RS14920 -1.6 -2.1 hypothetical protein compare
BPHYT_RS02590 -1.6 -4.3 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
BPHYT_RS33175 -1.6 -1.5 hypothetical protein compare
BPHYT_RS08525 -1.6 -0.9 SAM-dependent methyltransferase compare
BPHYT_RS16250 -1.6 -0.8 N5-carboxyaminoimidazole ribonucleotide mutase compare
BPHYT_RS00815 -1.6 -0.8 hypothetical protein compare
BPHYT_RS15190 -1.5 -1.5 acyl carrier protein compare
BPHYT_RS07540 -1.5 -0.9 hypothetical protein compare
BPHYT_RS28065 -1.5 -0.9 hypothetical protein compare
BPHYT_RS35235 -1.5 -1.8 amino acid transporter compare
BPHYT_RS09145 -1.5 -6.1 poly-beta-hydroxybutyrate polymerase compare
BPHYT_RS27890 -1.5 -1.0 hypothetical protein compare
BPHYT_RS02930 -1.5 -1.4 KpsF/GutQ family protein compare
BPHYT_RS10345 -1.5 -0.7 flagellar motor protein MotB compare
BPHYT_RS27860 -1.5 -1.5 membrane protein compare
BPHYT_RS13220 -1.5 -4.3 phosphomethylpyrimidine synthase compare
BPHYT_RS00160 -1.5 -2.3 ABC transporter substrate-binding protein compare
BPHYT_RS20665 -1.5 -0.9 LysR family transcriptional regulator compare
BPHYT_RS03065 -1.5 -1.2 LuxR family transcriptional regulator compare
BPHYT_RS33615 -1.5 -2.1 decarboxylase compare
BPHYT_RS09645 -1.4 -4.1 ankyrin compare
BPHYT_RS07475 -1.4 -1.2 nitrate reductase compare
BPHYT_RS03090 -1.4 -1.3 hypothetical protein compare
BPHYT_RS11995 -1.4 -2.0 flagellar hook protein FlgE compare
BPHYT_RS10260 -1.4 -1.2 hypothetical protein compare
BPHYT_RS02710 -1.4 -0.8 hypothetical protein compare
BPHYT_RS26025 -1.4 -0.8 hypothetical protein compare
BPHYT_RS17520 -1.4 -4.2 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase compare
BPHYT_RS17380 -1.4 -5.7 ribulose-phosphate 3-epimerase compare
BPHYT_RS16180 -1.4 -0.7 TetR family transcriptional regulator compare
BPHYT_RS08340 -1.4 -0.3 chemotaxis protein CheY compare
BPHYT_RS23100 -1.4 -1.5 sugar ABC transporter substrate-binding protein compare
BPHYT_RS00115 -1.4 -1.2 acetaldehyde dehydrogenase compare
BPHYT_RS01115 -1.4 -1.3 hypothetical protein compare
BPHYT_RS15710 -1.4 -1.0 ATP-dependent Clp protease ATP-binding protein compare
BPHYT_RS05040 -1.4 -1.8 sugar ABC transporter ATPase compare
BPHYT_RS19785 -1.4 -0.8 chemotaxis protein CheY compare
BPHYT_RS08385 -1.4 -1.1 secretion protein compare
BPHYT_RS06500 -1.3 -2.2 LOG family protein compare
BPHYT_RS08490 -1.3 -1.9 Crp/Fnr family transcriptional regulator compare
BPHYT_RS05960 -1.3 -4.4 endoribonuclease L-PSP compare
BPHYT_RS26135 -1.3 -1.0 ABC transporter permease compare
BPHYT_RS10120 -1.3 -2.4 membrane protein compare
BPHYT_RS17035 -1.3 -2.3 sugar kinase compare
BPHYT_RS25025 -1.3 -2.3 acyl-CoA dehydrogenase compare
BPHYT_RS21475 -1.3 -3.1 hypothetical protein compare
BPHYT_RS26740 -1.3 -1.4 hypothetical protein compare
BPHYT_RS21870 -1.3 -1.1 hypothetical protein compare
BPHYT_RS17095 -1.3 -2.0 proline--tRNA ligase compare
BPHYT_RS29820 -1.3 -2.4 hypothetical protein compare
BPHYT_RS30750 -1.3 -1.2 GntR family transcriptional regulator compare
BPHYT_RS28745 -1.3 -1.5 2-keto-4-pentenoate hydratase compare
BPHYT_RS24315 -1.3 -1.1 phosphoribosyltransferase compare
BPHYT_RS29810 -1.3 -0.8 hexapeptide transferase compare
BPHYT_RS30130 -1.3 -2.4 AraC family transcriptional regulator compare
BPHYT_RS16175 -1.3 -1.3 hemolysin D compare
BPHYT_RS16085 -1.3 -2.7 DeoR faimly transcriptional regulator compare
BPHYT_RS14400 -1.3 -2.3 anti-sigma factor compare
BPHYT_RS23895 -1.3 -1.7 hypothetical protein compare
BPHYT_RS28535 -1.3 -0.8 response regulator receiver compare
BPHYT_RS00350 -1.3 -1.6 hypothetical protein compare
BPHYT_RS27230 -1.2 -1.3 hypothetical protein compare
BPHYT_RS13450 -1.2 -1.0 GntR family transcriptional regulator compare
BPHYT_RS15640 -1.2 -6.2 L-aspartate oxidase compare
BPHYT_RS05300 -1.2 -1.8 polyketide cyclase compare
BPHYT_RS30085 -1.2 -1.2 hypothetical protein compare
BPHYT_RS09815 -1.2 -1.5 malate synthase compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source D-Glucose in Burkholderia phytofirmans PsJN

For carbon source D-Glucose across organisms