Experiment set11IT005 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Veratric Acid 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_1544 -4.1 -3.9 SirA-like protein compare
Psyr_4340 -3.8 -8.7 phosphomethylpyrimidine kinase, putative compare
Psyr_0951 -3.8 -4.4 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_1613 -3.6 -4.9 septum site-determining protein MinC compare
Psyr_4991 -3.3 -3.2 hypothetical protein compare
Psyr_4740 -3.2 -6.1 thiazole-phosphate synthase compare
Psyr_3008 -3.2 -8.9 Undecaprenyl-diphosphatase compare
Psyr_4683 -3.2 -4.3 dethiobiotin synthase compare
Psyr_4627 -3.0 -3.5 dimethyladenosine transferase compare
Psyr_4687 -3.0 -8.0 biotin synthase compare
Psyr_3854 -2.9 -2.4 OmpA/MotB compare
Psyr_0849 -2.9 -10.1 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_1556 -2.8 -3.7 hypothetical protein compare
Psyr_4341 -2.6 -7.4 thiamine-phosphate diphosphorylase compare
Psyr_4686 -2.5 -6.7 8-amino-7-oxononanoate synthase compare
Psyr_0454 -2.4 -6.0 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_1907 -2.2 -4.2 GTP cyclohydrolase I compare
Psyr_1663 -2.1 -3.9 phosphoribosylanthranilate isomerase compare
Psyr_0918 -2.1 -11.3 ABC transporter compare
Psyr_0475 -2.1 -2.4 Protein of unknown function YGGT compare
Psyr_0574 -2.0 -5.5 protease FtsH subunit HflK compare
Psyr_4203 -1.9 -2.5 SsrA-binding protein compare
Psyr_4091 -1.9 -3.8 8-oxo-dGTPase compare
Psyr_5132 -1.8 -3.8 Glucose-inhibited division protein A subfamily compare
Psyr_2347 -1.8 -2.4 hypothetical protein compare
Psyr_4822 -1.8 -3.4 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_0917 -1.8 -10.0 ABC-2 compare
Psyr_4684 -1.7 -2.7 biotin synthesis protein BioC compare
Psyr_1555 -1.6 -4.9 Cobyrinic acid a,c-diamide synthase compare
Psyr_0255 -1.5 -2.5 glutamate-cysteine ligase compare
Psyr_0487 -1.5 -2.5 glutathione synthase compare
Psyr_1667 -1.4 -5.7 Colicin V production protein compare
Psyr_1885 -1.4 -2.5 hypothetical protein compare
Psyr_3808 -1.4 -1.7 hypothetical protein compare
Psyr_2848 -1.3 -4.2 hypothetical protein compare
Psyr_0826 -1.3 -5.9 glucose-6-phosphate isomerase compare
Psyr_0724 -1.3 -2.5 conserved hypothetical protein compare
Psyr_0575 -1.3 -3.1 protease FtsH subunit HflC compare
Psyr_3906 -1.3 -2.0 regulatory protein, DeoR compare
Psyr_0565 -1.3 -4.5 Protein of unknown function UPF0126 compare
Psyr_5135 -1.3 -1.9 Protein of unknown function DUF37 compare
Psyr_0528 -1.3 -2.6 Carbamoyltransferase compare
Psyr_4580 -1.3 -2.0 anthranilate phosphoribosyltransferase compare
Psyr_4884 -1.3 -4.2 Rhodanese-like protein compare
Psyr_3954 -1.2 -4.9 GTP-binding protein LepA compare
Psyr_4362 -1.2 -2.5 Rare lipoprotein A compare
Psyr_4830 -1.2 -1.5 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0282 -1.2 -4.2 Binding-protein-dependent transport systems inner membrane component compare
Psyr_4136 -1.2 -2.0 BolA-like protein compare
Psyr_1748 -1.2 -3.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_0259 -1.2 -3.0 Osmolarity sensor protein envZ compare
Psyr_1747 -1.1 -3.4 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_5133 -1.1 -3.2 tRNA modification GTPase trmE compare
Psyr_0535 -1.1 -2.3 toluene tolerance protein, putative compare
Psyr_2769 -1.1 -2.6 conserved hypothetical protein compare
Psyr_1410 -1.1 -3.2 Holliday junction DNA helicase RuvB compare
Psyr_1198 -1.1 -2.7 type III secretion protein HrpF compare
Psyr_3581 -1.1 -4.4 ribosomal large subunit pseudouridine synthase B compare
Psyr_3130 -1.1 -3.3 Secretion protein HlyD compare
Psyr_1357 -1.1 -2.9 RNase HII compare
Psyr_4581 -1.0 -1.6 anthranilate synthase, component II compare
Psyr_2854 -1.0 -2.9 conserved hypothetical protein compare
Psyr_1419 -1.0 -2.4 preQ(0) biosynthesis protein QueC compare
Psyr_2641 -1.0 -2.3 hypothetical protein compare
Psyr_3701 -1.0 -1.7 thioredoxin, putative compare
Psyr_1250 -1.0 -2.9 conserved hypothetical protein compare
Psyr_2285 -1.0 -1.9 Twin-arginine translocation pathway signal compare
Psyr_2030 -1.0 -1.4 Calcium-binding EF-hand compare
Psyr_1408 -1.0 -2.0 Holliday junction endonuclease RuvC compare
Psyr_1227 -1.0 -1.9 Queuosine biosynthesis protein compare
Psyr_3806 -1.0 -3.3 hypothetical protein compare
Psyr_4089 -1.0 -3.7 PAS compare
Psyr_1975 -1.0 -1.2 Integrase, catalytic region compare
Psyr_2471 -1.0 -1.5 hydroxymethylglutaryl-CoA lyase compare
Psyr_2921 -1.0 -1.4 ADP-ribosylglycohydrolase compare
Psyr_3462 -1.0 -2.0 conserved hypothetical protein compare
Psyr_3807 -0.9 -3.8 hypothetical protein compare
Psyr_4460 -0.9 -1.9 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_0215 -0.9 -6.1 Exodeoxyribonuclease III xth compare
Psyr_4480 -0.9 -1.8 outer membrane transport energization protein TonB compare
Psyr_2851 -0.9 -1.7 conserved hypothetical protein compare
Psyr_4350 -0.9 -2.6 Protein of unknown function DUF218 compare
Psyr_4622 -0.9 -2.7 Nucleotidyl transferase compare
Psyr_1935 -0.9 -3.8 Protein of unknown function DUF796 compare
Psyr_3090 -0.9 -2.2 hypothetical protein compare
Psyr_5050 -0.9 -2.2 transcriptional regulator, LysR family compare
Psyr_3199 -0.9 -2.1 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_1930 -0.9 -2.5 hypothetical protein compare
Psyr_1404 -0.9 -5.4 Ferritin and Dps compare
Psyr_4609 -0.9 -6.2 anthranilate synthase, component I compare
Psyr_4490 -0.9 -1.8 transcriptional regulator, DeoR family compare
Psyr_1460 -0.9 -3.0 hypothetical protein compare
Psyr_3419 -0.9 -3.0 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_0053 -0.9 -2.4 conserved hypothetical protein compare
Psyr_0137 -0.9 -1.7 outer membrane transport energization protein ExbD compare
Psyr_3840 -0.9 -3.1 conserved hypothetical protein compare
Psyr_0927 -0.9 -3.3 hypothetical protein compare
Psyr_1039 -0.9 -1.7 FecR protein compare
Psyr_0034 -0.9 -1.1 tryptophan synthase, beta chain compare
Psyr_1751 -0.8 -2.7 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_4408 -0.8 -4.5 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_3583 -0.8 -2.9 condensin subunit ScpB compare
Psyr_0184 -0.8 -2.1 Protein of unknown function DUF484 compare
Psyr_3193 -0.8 -1.7 Transcription factor jumonji, jmjC compare
Psyr_4512 -0.8 -4.3 putative phage-related protein compare
Psyr_0571 -0.8 -2.3 tRNA isopentenyltransferase compare
Psyr_3208 -0.8 -1.7 NADH dehydrogenase subunit M compare
Psyr_2823 -0.8 -1.1 hypothetical protein compare
Psyr_2462 -0.8 -3.0 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_2642 -0.8 -2.5 hypothetical protein compare
Psyr_0579 -0.8 -5.5 RNAse R compare
Psyr_0529 -0.8 -3.4 Glycosyl transferase, group 1 compare
Psyr_RNA61 -0.8 -1.8 tRNA-Gly compare
Psyr_1832 -0.8 -2.1 Exonuclease compare
Psyr_0014 -0.8 -2.1 lipid A biosynthesis acyltransferase compare
Psyr_2346 -0.8 -2.3 conserved hypothetical protein compare
Psyr_4476 -0.8 -3.3 dTDP-4-dehydrorhamnose reductase compare
Psyr_2664 -0.8 -3.7 hypothetical protein compare
Psyr_2255 -0.8 -1.3 ABC transporter compare
Psyr_1350 -0.8 -2.2 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_1378 -0.8 -1.6 RecA protein compare
Psyr_0394 -0.8 -3.2 Heat shock protein HslU compare
Psyr_3213 -0.8 -2.2 Propeptide, PepSY amd peptidase M4 compare
Psyr_2930 -0.8 -1.9 Glyoxalase/bleomycin resistance protein/dioxygenase compare
Psyr_1947 -0.8 -1.7 MbtH-like protein compare
Psyr_3677 -0.8 -2.0 Aminotransferase, class I and II compare
Psyr_2386 -0.8 -1.6 hypothetical protein compare
Psyr_1588 -0.8 -1.7 Putative exonuclease, RdgC compare
Psyr_0638 -0.8 -1.9 Peptidase S16, lon N-terminal compare
Psyr_1009 -0.8 -2.0 Peptidylprolyl isomerase, FKBP-type compare
Psyr_2060 -0.7 -1.8 Sec-independent protein translocase TatD compare
Psyr_3620 -0.7 -1.1 hypothetical protein compare
Psyr_1980 -0.7 -1.9 Heat shock protein Hsp20 compare
Psyr_2184 -0.7 -1.9 Short-chain dehydrogenase/reductase SDR compare
Psyr_3240 -0.7 -2.2 CTP synthase compare
Psyr_0493 -0.7 -2.3 CheW-like protein compare
Psyr_1864 -0.7 -2.4 spermidine synthase compare
Psyr_3585 -0.7 -2.1 Sua5/YciO/YrdC/YwlC compare
Psyr_3293 -0.7 -1.2 UspA compare
Psyr_1121 -0.7 -1.2 6-phosphogluconolactonase compare
Psyr_3287 -0.7 -1.3 DNA topoisomerase I compare
Psyr_2739 -0.7 -2.6 ThiJ/PfpI compare
Psyr_2345 -0.7 -2.5 ea59 protein compare
Psyr_1783 -0.7 -1.4 CDS compare
Psyr_3867 -0.7 -1.5 hypothetical protein compare
Psyr_3809 -0.7 -2.5 hypothetical protein compare
Psyr_2320 -0.7 -3.4 YD repeat protein compare
Psyr_2095 -0.7 -2.5 Conserved TM helix compare
Psyr_2590 -0.7 -1.9 Periplasmic binding protein compare
Psyr_2227 -0.7 -1.6 conserved hypothetical protein compare
Psyr_0033 -0.7 -0.7 tryptophan synthase, alpha chain compare
Psyr_3589 -0.7 -2.3 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_0170 -0.7 -1.7 heat shock protein Hsp15 compare
Psyr_3013 -0.7 -1.0 magnesium chelatase subunit ChlD compare
Psyr_0919 -0.7 -4.4 Chromosome segregation ATPase-like protein compare
Psyr_4995 -0.7 -2.0 RHS protein compare
Psyr_2378 -0.7 -1.8 transcriptional regulator, TetR family compare
Psyr_4519 -0.7 -3.6 General substrate transporter:Major facilitator superfamily compare
Psyr_2039 -0.7 -1.2 Fimbrial protein compare
Psyr_0281 -0.7 -1.6 ABC transporter compare
Psyr_0464 -0.7 -0.9 hypothetical protein compare
Psyr_1791 -0.7 -1.9 HAD-superfamily hydrolase, subfamily IA, variant 2 compare
Psyr_0982 -0.7 -1.9 conserved hypothetical protein compare
Psyr_1094 -0.7 -1.9 cold-shock DNA-binding protein family compare
Psyr_2899 -0.7 -2.3 conserved hypothetical protein compare
Psyr_2787 -0.7 -1.6 hypothetical protein compare
Psyr_3047 -0.6 -3.4 Helix-turn-helix motif protein compare
Psyr_1212 -0.6 -1.8 type III secretion protein HrpO compare
Psyr_0201 -0.6 -3.6 ATP-dependent DNA helicase RecG compare
Psyr_1247 -0.6 -1.2 conserved hypothetical protein compare
Psyr_0549 -0.6 -0.8 Metallophosphoesterase compare
Psyr_2249 -0.6 -1.5 Binding-protein-dependent transport systems inner membrane component compare
Psyr_4254 -0.6 -1.6 conserved hypothetical protein compare
Psyr_1379 -0.6 -1.2 Regulatory protein RecX compare
Psyr_1373 -0.6 -1.4 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_4316 -0.6 -1.8 conserved hypothetical protein compare
Psyr_1389 -0.6 -2.4 Protein of unknown function DUF1456 compare
Psyr_0920 -0.6 -5.1 Glycosyl transferase, group 1 compare
Psyr_4015 -0.6 -1.4 conserved domain protein compare
Psyr_2275 -0.6 -1.5 glutamate synthase (NADPH) GltB3 subunit compare
Psyr_2980 -0.6 -1.7 UDP-glucose pyrophosphorylase compare
Psyr_3133 -0.6 -1.1 Amidohydrolase 2 compare
Psyr_2990 -0.6 -1.1 conserved hypothetical protein compare
Psyr_2496 -0.6 -2.9 lipopolysaccharide core biosynthesis domain protein compare
Psyr_1749 -0.6 -3.2 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_1931 -0.6 -2.6 hypothetical protein compare
Psyr_2433 -0.6 -2.2 conserved hypothetical protein compare
Psyr_4688 -0.6 -2.3 Phosphoribosyltransferase compare
Psyr_1418 -0.6 -1.3 Radical SAM compare
Psyr_1802 -0.6 -1.1 transcriptional regulator, AsnC family compare
Psyr_1528 -0.6 -1.3 Arc-like DNA binding protein compare
Psyr_4343 -0.6 -3.2 Sel1-like repeat protein compare
Psyr_0941 -0.6 -3.0 Conserved hypothetical protein 92 compare
Psyr_3450 -0.6 -2.2 Hpt compare
Psyr_2779 -0.6 -1.1 Phage minor tail compare
Psyr_3137 -0.6 -3.2 ATPase compare
Psyr_5065 -0.6 -3.2 ATP-dependent DNA helicase UvrD compare
Psyr_2977 -0.6 -1.7 cointegrate resolution protein T compare
Psyr_0038 -0.6 -2.1 Protein of unknown function DUF1161 compare
Psyr_4194 -0.6 -2.2 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Veratric Acid across organisms