Experiment set11IT005 for Ralstonia sp. UNC404CL21Col

Compare to:

nitrogen source Ammonium chloride 20mM

200 most important genes:

  gene name fitness t score description  
ABZR87_RS14505 -7.5 -5.2 phosphoribosylanthranilate isomerase compare
ABZR87_RS01810 -7.4 -5.1 glutamate 5-kinase compare
ABZR87_RS02565 -7.0 -6.8 glutamate synthase subunit beta compare
ABZR87_RS02595 -6.9 -9.5 shikimate kinase compare
ABZR87_RS14530 -6.9 -4.7 3-isopropylmalate dehydrogenase compare
ABZR87_RS02570 -6.8 -21.2 glutamate synthase-related protein compare
ABZR87_RS02640 -6.8 -17.5 diaminopimelate decarboxylase compare
ABZR87_RS07360 -6.7 -16.3 threonine ammonia-lyase, biosynthetic compare
ABZR87_RS09465 -6.6 -6.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
ABZR87_RS00200 -6.6 -6.4 phosphoadenylyl-sulfate reductase compare
ABZR87_RS14500 -6.5 -12.5 tryptophan synthase subunit beta compare
ABZR87_RS16170 -6.4 -4.4 argininosuccinate lyase compare
ABZR87_RS01110 -6.3 -10.5 3-deoxy-7-phosphoheptulonate synthase AroG compare
ABZR87_RS02155 -6.2 -10.6 anthranilate phosphoribosyltransferase compare
ABZR87_RS22970 -6.2 -15.9 cystathionine gamma-synthase family protein compare
ABZR87_RS02160 -6.1 -7.8 indole-3-glycerol phosphate synthase TrpC compare
ABZR87_RS13250 -6.1 -4.2 phosphoserine phosphatase SerB compare
ABZR87_RS14540 -6.1 -8.3 3-isopropylmalate dehydratase large subunit compare
ABZR87_RS22920 -6.0 -4.2 phosphogluconate dehydratase compare
ABZR87_RS05200 -6.0 -19.5 homoserine O-acetyltransferase compare
ABZR87_RS13790 -5.8 -11.1 chorismate synthase compare
ABZR87_RS07380 -5.8 -14.6 FAD/FMN-binding oxidoreductase compare
ABZR87_RS14950 -5.8 -5.6 acetolactate synthase small subunit compare
ABZR87_RS14535 -5.7 -8.7 3-isopropylmalate dehydratase small subunit compare
ABZR87_RS16140 -5.7 -19.5 phosphoenolpyruvate carboxylase compare
ABZR87_RS02140 -5.6 -21.5 anthranilate synthase component I compare
ABZR87_RS00185 -5.6 -3.9 uroporphyrinogen-III C-methyltransferase compare
ABZR87_RS00285 -5.4 -3.7 acetylornithine transaminase compare
ABZR87_RS14490 -5.4 -12.0 tryptophan synthase subunit alpha compare
ABZR87_RS02590 -5.3 -13.5 3-dehydroquinate synthase compare
ABZR87_RS08630 -5.1 -3.6 dihydroorotase compare
ABZR87_RS00835 -5.0 -6.8 argininosuccinate synthase compare
ABZR87_RS04865 -4.9 -7.5 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABZR87_RS00190 -4.8 -14.5 sulfate adenylyltransferase subunit 1 compare
ABZR87_RS00210 -4.8 -12.0 nitrite/sulfite reductase compare
ABZR87_RS06770 -4.7 -8.6 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABZR87_RS14955 -4.7 -3.2 acetolactate synthase 3 catalytic subunit compare
ABZR87_RS05170 -4.6 -3.2 acetylglutamate kinase compare
ABZR87_RS11440 -4.5 -6.7 pyridoxal phosphate-dependent aminotransferase compare
ABZR87_RS09450 -4.3 -10.4 prephenate dehydratase compare
ABZR87_RS22915 -4.1 -13.6 glucose-6-phosphate dehydrogenase compare
ABZR87_RS05100 -4.1 -6.3 RNA polymerase-binding protein DksA compare
ABZR87_RS22910 -4.0 -2.7 6-phosphogluconolactonase compare
ABZR87_RS09445 -3.9 -12.0 3-phosphoserine/phosphohydroxythreonine transaminase compare
ABZR87_RS01605 -3.7 -10.5 shikimate dehydrogenase compare
ABZR87_RS00205 -3.7 -3.0 DUF934 domain-containing protein compare
ABZR87_RS07665 -3.6 -11.8 aminopeptidase P N-terminal domain-containing protein compare
ABZR87_RS23225 -3.6 -9.1 sugar ABC transporter permease compare
ABZR87_RS13300 -3.6 -11.0 class I poly(R)-hydroxyalkanoic acid synthase compare
ABZR87_RS09935 -3.4 -2.4 amino acid aminotransferase compare
ABZR87_RS04785 -3.4 -13.0 phosphomethylpyrimidine synthase ThiC compare
ABZR87_RS23215 -3.2 -8.5 D-xylose ABC transporter substrate-binding protein compare
ABZR87_RS23220 -3.1 -11.9 xylose ABC transporter ATP-binding protein compare
ABZR87_RS11815 -3.1 -11.4 [protein-PII] uridylyltransferase compare
ABZR87_RS08695 -3.1 -13.3 capsular polysaccharide biosynthesis protein CapF compare
ABZR87_RS00195 -3.1 -4.4 sulfate adenylyltransferase subunit CysD compare
ABZR87_RS12785 -3.1 -7.1 endopeptidase La compare
ABZR87_RS12790 -3.0 -4.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
ABZR87_RS07635 -2.9 -5.2 crossover junction endodeoxyribonuclease RuvC compare
ABZR87_RS07625 -2.9 -5.5 Holliday junction branch migration protein RuvA compare
ABZR87_RS07050 -2.9 -2.6 PTS IIA-like nitrogen regulatory protein PtsN compare
ABZR87_RS00435 -2.9 -11.3 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABZR87_RS00220 -2.8 -8.4 CysB family HTH-type transcriptional regulator compare
ABZR87_RS04125 -2.8 -8.8 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
ABZR87_RS07320 -2.8 -8.7 gluconokinase compare
ABZR87_RS15440 -2.8 -5.3 ribonuclease G compare
ABZR87_RS05590 -2.8 -1.9 orotate phosphoribosyltransferase compare
ABZR87_RS16180 -2.6 -6.0 arginine/lysine/ornithine decarboxylase compare
ABZR87_RS22690 -2.6 -3.7 XRE family transcriptional regulator compare
ABZR87_RS02145 -2.5 -2.2 aminodeoxychorismate/anthranilate synthase component II compare
ABZR87_RS01645 -2.4 -6.3 type II 3-dehydroquinate dehydratase compare
ABZR87_RS04990 -2.3 -3.0 thioredoxin family protein compare
ABZR87_RS12795 -2.3 -5.3 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
ABZR87_RS02480 -2.3 -3.4 imidazole glycerol phosphate synthase subunit HisH compare
ABZR87_RS13290 -2.3 -7.3 3-ketoacyl-ACP reductase compare
ABZR87_RS01675 -2.2 -3.0 carbohydrate kinase family protein compare
ABZR87_RS08700 -2.1 -9.4 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
ABZR87_RS10170 -2.1 -4.5 RseA family anti-sigma factor compare
ABZR87_RS07620 -2.1 -4.4 Holliday junction branch migration DNA helicase RuvB compare
ABZR87_RS00215 -2.1 -4.4 sulfite exporter TauE/SafE family protein compare
ABZR87_RS13475 -2.0 -6.5 PAS domain S-box protein compare
ABZR87_RS08645 -2.0 -1.5 dTDP-glucose 4,6-dehydratase compare
ABZR87_RS09030 -2.0 -7.0 NAD(P)-dependent oxidoreductase compare
ABZR87_RS11065 -1.9 -7.8 nitrogen regulation protein NR(II) compare
ABZR87_RS10785 -1.9 -7.3 exodeoxyribonuclease V subunit beta compare
ABZR87_RS00875 -1.9 -4.1 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABZR87_RS08625 -1.9 -1.3 aspartate carbamoyltransferase catalytic subunit compare
ABZR87_RS01225 -1.8 -3.0 YggS family pyridoxal phosphate-dependent enzyme compare
ABZR87_RS23210 -1.8 -8.0 carbohydrate porin compare
ABZR87_RS02575 -1.8 -5.6 transposase compare
ABZR87_RS23230 -1.8 -7.2 NAD(P)-dependent oxidoreductase compare
ABZR87_RS10930 -1.8 -2.5 outer membrane protein assembly factor BamB compare
ABZR87_RS05350 -1.8 -4.3 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
ABZR87_RS13175 -1.7 -2.3 tRNA-Leu compare
ABZR87_RS10240 -1.7 -2.3 elongation factor P maturation arginine rhamnosyltransferase EarP compare
ABZR87_RS08980 -1.6 -4.9 cell envelope integrity protein TolA compare
ABZR87_RS11555 -1.6 -5.1 CysB family HTH-type transcriptional regulator conserved
ABZR87_RS10820 -1.6 -5.5 LysR substrate-binding domain-containing protein compare
ABZR87_RS10780 -1.5 -4.3 PD-(D/E)XK nuclease family protein compare
ABZR87_RS10620 -1.5 -2.0 serine O-acetyltransferase compare
ABZR87_RS09895 -1.5 -1.9 DUF1841 family protein compare
ABZR87_RS01430 -1.4 -8.8 LysR family transcriptional regulator compare
ABZR87_RS10980 -1.4 -1.8 tRNA-Leu compare
ABZR87_RS03420 -1.4 -0.8 type II secretion system minor pseudopilin GspI compare
ABZR87_RS14115 -1.4 -5.0 ATP-dependent zinc metalloprotease FtsH compare
ABZR87_RS00360 -1.4 -1.5 acyl-CoA desaturase compare
ABZR87_RS07035 -1.4 -7.6 RNase adapter RapZ compare
ABZR87_RS21795 -1.3 -5.8 NUDIX domain-containing protein compare
ABZR87_RS16960 -1.3 -3.1 HAMP domain-containing sensor histidine kinase compare
ABZR87_RS19095 -1.3 -3.3 gluconate:H+ symporter compare
ABZR87_RS09460 -1.3 -3.7 prephenate dehydrogenase compare
ABZR87_RS13285 -1.3 -6.9 polyhydroxyalkanoate synthesis repressor PhaR compare
ABZR87_RS16165 -1.3 -1.3 anti-sigma factor compare
ABZR87_RS10400 -1.3 -2.9 hypothetical protein compare
ABZR87_RS11925 -1.3 -7.4 phosphoenolpyruvate synthase compare
ABZR87_RS01245 -1.2 -4.6 Dps family protein compare
ABZR87_RS21815 -1.2 -1.2 MarR family winged helix-turn-helix transcriptional regulator compare
ABZR87_RS16250 -1.2 -3.3 iron-sulfur cluster carrier protein ApbC compare
ABZR87_RS17145 -1.2 -8.6 AMP nucleosidase compare
ABZR87_RS11070 -1.2 -5.7 nitrogen regulation protein NR(I) compare
ABZR87_RS05065 -1.2 -3.5 tyrosine recombinase XerC compare
ABZR87_RS05060 -1.1 -2.6 DUF484 family protein compare
ABZR87_RS06845 -1.1 -6.2 heme o synthase compare
ABZR87_RS14235 -1.1 -5.7 formyltetrahydrofolate deformylase compare
ABZR87_RS00795 -1.1 -4.1 site-specific tyrosine recombinase XerD compare
ABZR87_RS10865 -1.1 -5.0 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
ABZR87_RS07675 -1.1 -5.9 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU compare
ABZR87_RS09515 -1.1 -1.1 cysteine synthase CysM compare
ABZR87_RS19675 -1.1 -1.3 cold-shock protein compare
ABZR87_RS10610 -1.1 -1.4 inositol monophosphatase family protein compare
ABZR87_RS11170 -1.1 -1.1 FixH family protein compare
ABZR87_RS10175 -1.1 -4.8 MucB/RseB C-terminal domain-containing protein compare
ABZR87_RS05085 -1.1 -7.8 lactonase family protein compare
ABZR87_RS07645 -1.1 -3.6 Fis family transcriptional regulator compare
ABZR87_RS08985 -1.1 -6.4 Tol-Pal system beta propeller repeat protein TolB compare
ABZR87_RS09635 -1.1 -1.3 ribosome small subunit-dependent GTPase A compare
ABZR87_RS06715 -1.1 -3.3 PTS sugar transporter subunit IIA compare
ABZR87_RS14495 -1.1 -2.3 site-specific DNA-methyltransferase compare
ABZR87_RS06030 -1.0 -0.9 AraC family transcriptional regulator compare
ABZR87_RS14890 -1.0 -0.8 preprotein translocase subunit SecG compare
ABZR87_RS12295 -1.0 -3.1 muconate/chloromuconate family cycloisomerase compare
ABZR87_RS06355 -1.0 -4.2 SPOR domain-containing protein compare
ABZR87_RS16125 -1.0 -3.9 heme biosynthesis protein HemY compare
ABZR87_RS08655 -1.0 -3.6 glucose-1-phosphate thymidylyltransferase RfbA compare
ABZR87_RS01980 -1.0 -1.9 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABZR87_RS06645 -1.0 -1.0 TlpA disulfide reductase family protein compare
ABZR87_RS23095 -1.0 -1.0 MarR family transcriptional regulator compare
ABZR87_RS18190 -1.0 -2.3 Ivy family c-type lysozyme inhibitor compare
ABZR87_RS19345 -0.9 -2.3 glutaminase compare
ABZR87_RS01035 -0.9 -3.5 histidine utilization repressor compare
ABZR87_RS04860 -0.9 -2.0 phage holin family protein compare
ABZR87_RS08990 -0.9 -3.6 peptidoglycan-associated lipoprotein Pal compare
ABZR87_RS00970 -0.9 -1.1 molecular chaperone DnaJ compare
ABZR87_RS08610 -0.9 -2.6 YqgE/AlgH family protein compare
ABZR87_RS14510 -0.9 -3.4 tRNA pseudouridine(38-40) synthase TruA compare
ABZR87_RS10165 -0.9 -5.9 RNA polymerase sigma factor RpoE compare
ABZR87_RS08660 -0.9 -4.4 dTDP-4-dehydrorhamnose 3,5-epimerase compare
ABZR87_RS15505 -0.8 -1.0 DNA polymerase III subunit alpha compare
ABZR87_RS15705 -0.8 -2.3 UvrD-helicase domain-containing protein compare
ABZR87_RS02150 -0.8 -1.6 lysozyme inhibitor LprI family protein compare
ABZR87_RS11940 -0.8 -1.9 SsrA-binding protein SmpB compare
ABZR87_RS16185 -0.8 -1.0 dCTP deaminase compare
ABZR87_RS10030 -0.8 -1.4 SDR family oxidoreductase compare
ABZR87_RS00830 -0.8 -1.5 pyrimidine/purine nucleoside phosphorylase compare
ABZR87_RS11195 -0.8 -4.4 pseudouridine synthase compare
ABZR87_RS11495 -0.8 -1.7 NADPH-dependent FMN reductase compare
ABZR87_RS23265 -0.8 -1.4 MarR family winged helix-turn-helix transcriptional regulator compare
ABZR87_RS21285 -0.8 -1.8 TetR/AcrR family transcriptional regulator compare
ABZR87_RS16400 -0.8 -1.7 LysR family transcriptional regulator compare
ABZR87_RS01270 -0.8 -4.6 ATP-dependent DNA helicase RecG compare
ABZR87_RS17310 -0.8 -3.9 PadR family transcriptional regulator compare
ABZR87_RS08970 -0.8 -3.2 protein TolQ compare
ABZR87_RS11000 -0.8 -4.5 transaldolase compare
ABZR87_RS11245 -0.8 -3.3 translational GTPase TypA compare
ABZR87_RS13495 -0.8 -2.7 exodeoxyribonuclease III compare
ABZR87_RS10195 -0.8 -1.8 signal peptidase I compare
ABZR87_RS14350 -0.8 -3.1 DUF4239 domain-containing protein compare
ABZR87_RS01610 -0.8 -4.4 energy transducer TonB compare
ABZR87_RS13330 -0.7 -2.5 DUF465 domain-containing protein compare
ABZR87_RS05025 -0.7 -0.8 rod shape-determining protein MreC compare
ABZR87_RS09415 -0.7 -2.8 HAD-IA family hydrolase compare
ABZR87_RS06855 -0.7 -2.0 RNA polymerase sigma factor RpoH compare
ABZR87_RS14380 -0.7 -3.0 glutamate racemase compare
ABZR87_RS07470 -0.7 -4.2 TetR/AcrR family transcriptional regulator compare
ABZR87_RS14675 -0.7 -0.7 glyoxalase compare
ABZR87_RS09625 -0.7 -4.5 CobD/CbiB family protein compare
ABZR87_RS11770 -0.7 -3.3 succinyldiaminopimelate transaminase compare
ABZR87_RS11265 -0.7 -1.1 amino acid ABC transporter ATP-binding protein compare
ABZR87_RS02305 -0.7 -1.3 CDGSH iron-sulfur domain-containing protein compare
ABZR87_RS00150 -0.7 -4.5 leucyl aminopeptidase compare
ABZR87_RS15815 -0.7 -2.6 ABC transporter substrate-binding protein compare
ABZR87_RS15605 -0.7 -1.3 hypothetical protein compare
ABZR87_RS10395 -0.7 -3.8 single-stranded-DNA-specific exonuclease RecJ compare
ABZR87_RS07965 -0.7 -3.0 recombinase RecA compare
ABZR87_RS07705 -0.7 -1.9 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
ABZR87_RS17650 -0.7 -3.4 TetR/AcrR family transcriptional regulator compare
ABZR87_RS13400 -0.7 -0.7 hypothetical protein compare
ABZR87_RS15680 -0.7 -4.0 DNA polymerase I compare
ABZR87_RS22645 -0.7 -1.4 hypothetical protein compare
ABZR87_RS10520 -0.7 -3.3 3',5'-nucleoside bisphosphate phosphatase compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source Ammonium chloride in Ralstonia sp. UNC404CL21Col

For nitrogen source Ammonium chloride across organisms