Experiment set11H40 for Pseudomonas stutzeri RCH2

Compare to:

LB with MreB Perturbing Compound A22 0.005 mg/ml

200 most important genes:

  gene name fitness t score description  
Psest_3648 -4.7 -9.4 anthranilate phosphoribosyltransferase compare
Psest_2584 -4.4 -5.2 Phosphoribosylanthranilate isomerase compare
Psest_1492 -4.4 -4.2 DNA-binding ferritin-like protein (oxidative damage protectant) compare
Psest_3647 -4.2 -7.5 Indole-3-glycerol phosphate synthase compare
Psest_0259 -3.6 -1.5 cell division ATP-binding protein FtsE compare
Psest_0062 -3.4 -10.4 tryptophan synthase, alpha subunit compare
Psest_0719 -3.2 -8.3 Uncharacterized protein conserved in bacteria compare
Psest_2304 -3.1 -1.6 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family compare
Psest_3031 -3.1 -1.3 hypothetical protein compare
Psest_2945 -2.7 -1.8 septum site-determining protein MinC compare
Psest_3650 -2.6 -10.6 anthranilate synthase component I, non-proteobacterial lineages compare
Psest_3910 -2.6 -1.9 Uncharacterized protein conserved in bacteria compare
Psest_0063 -2.6 -9.0 tryptophan synthase, beta subunit compare
Psest_4310 -2.4 -2.2 ABC-type Mn2+/Zn2+ transport systems, permease components compare
Psest_0193 -2.3 -1.5 conserved hypothetical protein compare
Psest_0514 -2.2 -7.7 lytic murein transglycosylase B compare
Psest_4049 -2.2 -1.8 hypothetical protein compare
Psest_2566 -2.1 -1.4 Uncharacterized protein conserved in bacteria compare
Psest_4219 -2.1 -2.4 DNA polymerase I compare
Psest_4191 -2.0 -3.3 Transcriptional regulator compare
Psest_4078 -2.0 -3.0 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D compare
Psest_4298 -2.0 -1.2 Response regulator containing a CheY-like receiver domain and a GGDEF domain compare
Psest_1496 -2.0 -1.2 Holliday junction DNA helicase, RuvA subunit compare
Psest_1879 -1.9 -3.3 Trk-type K+ transport systems, membrane components compare
Psest_1012 -1.8 -4.8 Signal transduction histidine kinase compare
Psest_0515 -1.8 -4.5 rare lipoprotein A compare
Psest_3129 -1.7 -1.4 tyrosine recombinase XerD compare
Psest_3084 -1.7 -2.7 methyltransferase, putative compare
Psest_2538 -1.7 -1.7 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases compare
Psest_1986 -1.7 -1.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
Psest_2285 -1.7 -2.9 ATP-dependent protease La compare
Psest_1087 -1.7 -1.4 uncharacterized peroxidase-related enzyme compare
Psest_0872 -1.6 -1.3 Helix-turn-helix. compare
Psest_0310 -1.6 -2.9 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family compare
Psest_0401 -1.6 -2.2 isopentenyl-diphosphate delta-isomerase, type 2 compare
Psest_0078 -1.6 -1.2 hypothetical protein compare
Psest_3960 -1.6 -1.4 3'(2'),5'-bisphosphate nucleotidase, bacterial compare
Psest_2946 -1.5 -2.0 septum site-determining protein MinD compare
Psest_3995 -1.5 -2.4 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_3853 -1.5 -2.5 ABC-type branched-chain amino acid transport systems, ATPase component compare
Psest_3767 -1.5 -3.9 tyrosine recombinase XerC compare
Psest_2565 -1.5 -1.8 Transcriptional regulator compare
Psest_3092 -1.4 -1.8 ribonuclease III, bacterial compare
Psest_4098 -1.4 -2.9 Superfamily I DNA and RNA helicases compare
Psest_1111 -1.4 -3.0 Flp pilus assembly protein TadD, contains TPR repeats compare
Psest_1574 -1.4 -2.0 phenazine biosynthesis protein PhzF family compare
Psest_2768 -1.4 -2.7 Kef-type K+ transport systems, predicted NAD-binding component compare
Psest_1510 -1.4 -2.7 Putative Zn-dependent protease, contains TPR repeats compare
Psest_0172 -1.4 -5.7 Uncharacterized protein conserved in bacteria compare
Psest_0115 -1.4 -1.3 Predicted integral membrane protein compare
Psest_1660 -1.3 -1.7 NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit compare
Psest_1562 -1.3 -1.8 Uncharacterized protein conserved in bacteria compare
Psest_2953 -1.3 -1.6 Histone acetyltransferase compare
Psest_1506 -1.3 -3.9 queuosine biosynthesis protein QueC compare
Psest_0759 -1.3 -1.7 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT). compare
Psest_1919 -1.3 -3.1 Uncharacterized membrane protein (homolog of Drosophila rhomboid) compare
Psest_2104 -1.3 -1.4 IscR-regulated protein YhgI compare
Psest_3565 -1.2 -1.5 hypothetical protein compare
Psest_0744 -1.2 -1.0 Uncharacterized conserved protein compare
Psest_2992 -1.1 -3.2 Uncharacterized conserved protein compare
Psest_1472 -1.1 -5.2 Protein of unknown function (DUF3108). compare
Psest_3777 -1.1 -1.9 diguanylate cyclase (GGDEF) domain compare
Psest_3039 -1.1 -0.9 periplasmic nitrate reductase, NapE protein compare
Psest_0842 -1.1 -1.6 anaerobic ribonucleoside-triphosphate reductase activating protein compare
Psest_2343 -1.1 -3.1 Mg-dependent DNase compare
Psest_4274 -1.1 -1.8 hypothetical protein compare
Psest_4183 -1.1 -2.0 PilZ domain. compare
Psest_4108 -1.1 -3.5 seryl-tRNA(sec) selenium transferase compare
Psest_1752 -1.0 -1.3 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB compare
Psest_4154 -1.0 -3.5 flagella basal body P-ring formation protein FlgA compare
Psest_3649 -1.0 -3.9 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase compare
Psest_1306 -1.0 -1.0 hypothetical protein compare
Psest_3045 -1.0 -1.4 Cold shock proteins compare
Psest_3944 -1.0 -1.9 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
Psest_2238 -1.0 -2.2 hypothetical protein compare
Psest_2424 -1.0 -1.4 K+ transport systems, NAD-binding component compare
Psest_1305 -1.0 -2.5 Heat shock protein compare
Psest_1695 -1.0 -2.1 Tfp pilus assembly protein PilZ compare
Psest_0297 -1.0 -3.1 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_0516 -1.0 -4.6 D-alanyl-D-alanine carboxypeptidase compare
Psest_3301 -0.9 -1.7 Predicted transcriptional regulator, BolA superfamily compare
Psest_2775 -0.9 -2.0 Glycerol-3-phosphate dehydrogenase compare
Psest_3954 -0.9 -1.9 Small protein A (tmRNA-binding) compare
Psest_0505 -0.9 -3.5 Putative effector of murein hydrolase compare
Psest_0119 -0.9 -1.3 hypothetical protein compare
Psest_0958 -0.9 -3.8 Oligoketide cyclase/lipid transport protein compare
Psest_2899 -0.9 -0.9 hypothetical protein compare
Psest_1226 -0.9 -2.1 hypothetical protein compare
Psest_2347 -0.9 -4.8 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component compare
Psest_2643 -0.9 -1.5 Beta-glucosidase-related glycosidases compare
Psest_1642 -0.9 -1.9 Uncharacterized protein conserved in bacteria compare
Psest_3389 -0.9 -1.9 hypothetical protein compare
Psest_4042 -0.9 -1.5 hypothetical protein compare
Psest_2068 -0.9 -4.6 ABC-type oligopeptide transport system, periplasmic component compare
Psest_2786 -0.9 -0.7 Domain of unknown function (DUF3597). compare
Psest_3145 -0.9 -1.1 hypothetical protein compare
Psest_0013 -0.9 -3.9 Lauroyl/myristoyl acyltransferase compare
Psest_1623 -0.9 -3.3 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family compare
Psest_2253 -0.9 -1.4 small redox-active disulfide protein 2 compare
Psest_0789 -0.9 -2.0 hypothetical protein compare
Psest_3069 -0.9 -1.2 3-oxoadipate enol-lactonase compare
Psest_1877 -0.8 -2.1 AraC-type DNA-binding domain-containing proteins compare
Psest_1357 -0.8 -1.6 Uncharacterized protein conserved in bacteria compare
Psest_3080 -0.8 -1.2 AraC-type DNA-binding domain-containing proteins compare
Psest_0257 -0.8 -1.8 Predicted Zn-dependent peptidases compare
Psest_4241 -0.8 -2.4 hypothetical protein compare
Psest_1179 -0.8 -1.2 2-hydroxy-3-oxopropionate reductase compare
Psest_4128 -0.8 -0.7 Universal stress protein UspA and related nucleotide-binding proteins compare
Psest_1870 -0.8 -0.8 Transcriptional regulators compare
Psest_2991 -0.8 -3.2 hypothetical protein compare
Psest_4149 -0.8 -1.7 fagellar hook-basal body proteins compare
Psest_3690 -0.8 -2.2 Acyl carrier protein compare
Psest_1522 -0.8 -1.1 hypothetical protein compare
Psest_4280 -0.8 -1.8 ABC-type spermidine/putrescine transport system, permease component II compare
Psest_1149 -0.8 -1.4 Protein affecting phage T7 exclusion by the F plasmid compare
Psest_2066 -0.8 -1.2 ABC-type uncharacterized transport system, permease component compare
Psest_3100 -0.8 -2.4 RNA polymerase sigma factor RpoE compare
Psest_2123 -0.8 -1.0 fusion of gluconokinase (EC 2.7.1.12) and the small permease component of the D-gluconate TRAP transporter (from data) compare
Psest_0867 -0.8 -0.9 hypothetical protein compare
Psest_0765 -0.8 -3.2 hypothetical protein compare
Psest_3247 -0.8 -0.8 Uncharacterized membrane protein compare
Psest_2898 -0.8 -3.3 hypothetical protein compare
Psest_0718 -0.8 -2.3 nicotinate-nucleotide pyrophosphorylase compare
Psest_1824 -0.8 -1.4 Sugar transferases involved in lipopolysaccharide synthesis compare
Psest_0844 -0.8 -2.8 High-affinity Fe2+/Pb2+ permease compare
Psest_4067 -0.8 -2.0 Predicted membrane protein compare
Psest_1611 -0.8 -2.9 Beta-lactamase class D compare
Psest_2429 -0.8 -2.0 Predicted branched-chain amino acid permease (azaleucine resistance) compare
Psest_4370 -0.7 -1.3 Multisubunit Na+/H+ antiporter, MnhC subunit compare
Psest_3367 -0.7 -0.8 translation initation factor SUI1, putative, prokaryotic compare
Psest_4095 -0.7 -1.4 Uncharacterized protein conserved in bacteria compare
Psest_0060 -0.7 -1.4 Predicted Fe-S protein compare
Psest_3795 -0.7 -3.3 Glycine/D-amino acid oxidases (deaminating) compare
Psest_0031 -0.7 -1.1 Uncharacterized conserved protein compare
Psest_2232 -0.7 -5.5 UTP-glucose-1-phosphate uridylyltransferase compare
Psest_2662 -0.7 -3.2 hypothetical protein compare
Psest_1242 -0.7 -1.5 tRNA-guanine transglycosylase, queuosine-34-forming compare
Psest_2526 -0.7 -2.6 cytochrome c oxidase, cbb3-type, subunit III compare
Psest_3296 -0.7 -0.8 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain compare
Psest_1622 -0.7 -2.2 hypothetical protein compare
Psest_0785 -0.7 -1.8 Thioredoxin reductase compare
Psest_1601 -0.7 -1.3 Signal transduction histidine kinase compare
Psest_4315 -0.7 -1.3 ABC-type metal ion transport system, permease component compare
Psest_1905 -0.7 -1.1 Uncharacterized conserved protein, contains double-stranded beta-helix domain compare
Psest_2333 -0.7 -0.7 Protein of unknown function (DUF3359). compare
Psest_1293 -0.7 -1.0 VanZ like family. compare
Psest_3816 -0.7 -0.5 DNA-directed RNA polymerase, omega subunit compare
Psest_0073 -0.7 -3.3 ABC-type multidrug transport system, ATPase and permease components compare
Psest_3148 -0.7 -0.7 hypothetical protein compare
Psest_0833 -0.7 -3.2 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains compare
Psest_3921 -0.7 -1.4 Uncharacterized protein conserved in bacteria compare
Psest_2321 -0.7 -2.8 methylisocitrate lyase compare
Psest_0020 -0.7 -2.1 K+ transport systems, NAD-binding component compare
Psest_1681 -0.7 -1.7 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E compare
Psest_2997 -0.7 -3.9 Long-chain fatty acid transport protein compare
Psest_0225 -0.7 -1.5 Predicted permease, DMT superfamily compare
Psest_2011 -0.7 -3.4 Predicted permease compare
Psest_1491 -0.7 -1.3 Cold shock proteins compare
Psest_1950 -0.7 -5.1 D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family compare
Psest_0161 -0.7 -1.2 Membrane-bound metallopeptidase compare
Psest_2711 -0.7 -1.7 PilZ domain. compare
Psest_1884 -0.7 -0.9 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_4330 -0.7 -1.8 Protein of unknown function (DUF2909). compare
Psest_4363 -0.7 -2.7 ATPases involved in chromosome partitioning compare
Psest_1360 -0.7 -1.8 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components compare
Psest_0508 -0.7 -2.9 gamma-glutamyl phosphate reductase compare
Psest_4345 -0.7 -3.6 Bacteriophytochrome (light-regulated signal transduction histidine kinase) compare
Psest_3395 -0.7 -0.7 hypothetical protein compare
Psest_1514 -0.7 -2.9 Glycine cleavage system regulatory protein compare
Psest_3419 -0.7 -2.3 Predicted transcriptional regulators compare
Psest_0814 -0.7 -1.5 MoxR-like ATPases compare
Psest_2425 -0.7 -1.4 Trk-type K+ transport systems, membrane components compare
Psest_2630 -0.7 -1.7 hypothetical protein compare
Psest_0732 -0.7 -1.5 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family compare
Psest_1707 -0.6 -2.9 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain compare
Psest_2531 -0.6 -4.1 cytochrome c oxidase accessory protein FixG compare
Psest_4385 -0.6 -3.0 hypothetical protein compare
Psest_1544 -0.6 -3.2 single-stranded-DNA-specific exonuclease RecJ compare
Psest_1206 -0.6 -1.5 ABC-type Mn2+/Zn2+ transport systems, permease components compare
Psest_3128 -0.6 -1.6 Protein-disulfide isomerase compare
Psest_4044 -0.6 -1.2 type I site-specific deoxyribonuclease, HsdR family compare
Psest_3176 -0.6 -2.1 Predicted ATPase compare
Psest_1724 -0.6 -1.1 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) compare
Psest_2001 -0.6 -0.8 2-phosphoglycolate phosphatase, prokaryotic compare
Psest_0915 -0.6 -1.6 hypothetical protein compare
Psest_1942 -0.6 -2.9 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) compare
Psest_0032 -0.6 -3.9 D-alanyl-D-alanine carboxypeptidase compare
Psest_1854 -0.6 -2.4 Domain of Unknown Function (DUF748). compare
Psest_0533 -0.6 -2.4 Sel1 repeat. compare
Psest_3230 -0.6 -2.6 Uncharacterized conserved protein compare
Psest_1717 -0.6 -1.8 benzoate transporter compare
Psest_0852 -0.6 -1.9 glucose-6-phosphate 1-dehydrogenase compare
Psest_0408 -0.6 -1.5 Protein involved in catabolism of external DNA compare
Psest_1792 -0.6 -1.9 RND family efflux transporter, MFP subunit compare
Psest_1692 -0.6 -3.3 conserved hypothetical protein, YceG family compare
Psest_1909 -0.6 -1.1 Phosphohistidine phosphatase SixA compare
Psest_0299 -0.6 -1.7 Chemotaxis signal transduction protein compare
Psest_1370 -0.6 -2.4 hypothetical protein compare
Psest_1617 -0.6 -1.3 Methylase involved in ubiquinone/menaquinone biosynthesis compare
Psest_1525 -0.6 -2.0 Uncharacterized protein conserved in bacteria compare


Specific Phenotypes

None in this experiment

For Pseudomonas stutzeri RCH2 in stress experiments

For stress MreB Perturbing Compound A22 across organisms