Experiment set11H39 for Pseudomonas stutzeri RCH2

Compare to:

LB with MreB Perturbing Compound A22 0.005 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
Psest_3766 +3.0 5.5 Uncharacterized protein conserved in bacteria compare
Psest_2810 +2.8 7.4 5'/3'-nucleotidase SurE compare
Psest_2809 +2.5 4.4 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psest_0520 +2.2 2.7 hypothetical protein compare
Psest_3762 +1.7 5.8 iron donor protein CyaY compare
Psest_1752 +1.6 2.6 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB compare
Psest_4010 +1.6 2.0 peroxiredoxin, OsmC subfamily compare
Psest_2590 +1.6 2.0 3-isopropylmalate dehydratase, small subunit compare
Psest_3518 +1.5 1.5 Transcriptional regulators compare
Psest_3031 +1.4 1.8 hypothetical protein compare
Psest_3828 +1.4 1.9 zinc-binding alcohol dehydrogenase family protein compare
Psest_3720 +1.4 10.5 penicillin-binding protein, 1A family compare
Psest_3936 +1.4 3.8 ATP-dependent protease HslVU, peptidase subunit compare
Psest_1176 +1.3 2.5 Urea transporter compare
Psest_0498 +1.3 2.1 ribosome small subunit-dependent GTPase A compare
Psest_1772 +1.2 3.4 Aspartate/tyrosine/aromatic aminotransferase compare
Psest_2955 +1.2 2.3 Predicted transcriptional regulator with C-terminal CBS domains compare
Psest_2766 +1.2 1.6 hypothetical protein compare
Psest_0831 +1.2 1.7 hypothetical protein compare
Psest_3050 +1.2 2.4 tRNA_Gly_CCC compare
Psest_1657 +1.2 1.5 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit compare
Psest_2344 +1.2 2.4 Methyl-accepting chemotaxis protein compare
Psest_2744 +1.1 1.3 Uncharacterized conserved protein compare
Psest_0547 +1.1 1.7 Urease accessory protein UreF compare
Psest_1543 +1.1 3.7 Predicted transcription regulator, contains HTH domain (MarR family) compare
Psest_2786 +1.1 1.3 Domain of unknown function (DUF3597). compare
Psest_2579 +1.1 4.2 amidophosphoribosyltransferase compare
Psest_3399 +1.1 1.3 Uncharacterized protein conserved in bacteria compare
Psest_1704 +1.1 1.8 Dehydrogenases (flavoproteins) compare
Psest_1729 +1.1 6.1 flagellar motor switch protein FliM compare
Psest_2150 +1.0 1.5 DNA polymerase LigD, polymerase domain compare
Psest_3114 +1.0 5.1 electron transport complex, RnfABCDGE type, C subunit compare
Psest_0652 +1.0 1.9 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components compare
Psest_3377 +1.0 1.2 FKBP-type peptidyl-prolyl cis-trans isomerases 2 compare
Psest_3112 +1.0 3.4 electron transport complex, RnfABCDGE type, A subunit compare
Psest_3927 +1.0 3.2 thiazole biosynthesis/tRNA modification protein ThiI compare
Psest_2911 +1.0 1.7 Protein of unknown function (DUF2945). compare
Psest_4339 +1.0 3.2 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog compare
Psest_0697 +1.0 2.4 ribosomal protein L9 compare
Psest_2557 +1.0 1.8 Protein of unknown function (DUF2474). compare
Psest_3159 +1.0 3.9 phosphoribosylformylglycinamidine synthase, single chain form compare
Psest_3450 +1.0 4.5 Permeases compare
Psest_1026 +1.0 2.7 Uncharacterized iron-regulated protein compare
Psest_4287 +1.0 3.5 Predicted glutamine amidotransferases compare
Psest_1115 +1.0 1.9 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 compare
Psest_2229 +1.0 2.0 Uncharacterized protein conserved in bacteria compare
Psest_4088 +1.0 3.0 Transcriptional regulators compare
Psest_3455 +0.9 1.5 Dihaem cytochrome c. compare
Psest_2293 +0.9 1.3 hypothetical protein compare
Psest_3239 +0.9 2.3 hypothetical protein compare
Psest_0872 +0.9 0.9 Helix-turn-helix. compare
Psest_3712 +0.9 4.2 Type II secretory pathway, component ExeA (predicted ATPase) compare
Psest_2887 +0.9 2.1 Uncharacterized protein conserved in bacteria compare
Psest_2520 +0.9 1.3 Predicted SAM-dependent methyltransferase compare
Psest_1840 +0.9 8.2 Undecaprenyl-phosphate glucose phosphotransferase compare
Psest_3151 +0.9 2.2 hypothetical protein compare
Psest_0919 +0.9 1.8 Permeases of the drug/metabolite transporter (DMT) superfamily compare
Psest_1599 +0.9 2.4 heavy metal sensor kinase compare
Psest_3123 +0.9 1.3 dihydroorotase, homodimeric type compare
Psest_3470 +0.9 4.5 Uncharacterized conserved protein compare
Psest_0164 +0.8 0.7 Glutaredoxin, GrxC family compare
Psest_3488 +0.8 1.9 Universal stress protein UspA and related nucleotide-binding proteins compare
Psest_1617 +0.8 1.8 Methylase involved in ubiquinone/menaquinone biosynthesis compare
Psest_1249 +0.8 3.0 serine O-acetyltransferase compare
Psest_2370 +0.8 2.0 Protein of unknown function (DUF1652). compare
Psest_3012 +0.8 2.8 cob(II)yrinic acid a,c-diamide reductase compare
Psest_0969 +0.8 1.5 transcription elongation factor GreA compare
Psest_0796 +0.8 2.1 ABC-type transport system involved in multi-copper enzyme maturation, permease component compare
Psest_1079 +0.8 2.7 Isopropylmalate/homocitrate/citramalate synthases compare
Psest_2123 +0.8 1.5 fusion of gluconokinase (EC 2.7.1.12) and the small permease component of the D-gluconate TRAP transporter (from data) compare
Psest_2119 +0.8 2.1 Glycine/D-amino acid oxidases (deaminating) compare
Psest_0988 +0.8 1.9 Protein of unknown function (DUF2845). compare
Psest_2037 +0.8 2.5 uroporphyrin-III C-methyltransferase compare
Psest_0316 +0.8 1.9 Cytochrome c556 compare
Psest_3883 +0.8 3.7 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_1734 +0.8 2.6 flagellar biosynthetic protein FliR compare
Psest_1805 +0.8 1.4 integration host factor, beta subunit compare
Psest_1565 +0.8 2.3 RND family efflux transporter, MFP subunit compare
Psest_0837 +0.8 2.7 Putative lipid carrier protein compare
Psest_3531 +0.8 1.1 Peptidase propeptide and YPEB domain. compare
Psest_3185 +0.8 1.3 MoxR-like ATPases compare
Psest_3678 +0.8 2.1 acyl-phosphate glycerol 3-phosphate acyltransferase compare
Psest_3884 +0.8 0.7 Signal transduction histidine kinase compare
Psest_0678 +0.8 1.3 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region compare
Psest_4170 +0.8 1.3 Flagellar biosynthesis/type III secretory pathway protein compare
Psest_1457 +0.7 1.1 FOG: Ankyrin repeat compare
Psest_1166 +0.7 1.2 transcriptional regulator, ArgP family compare
Psest_4009 +0.7 2.4 conserverd hypothetical protein compare
Psest_3215 +0.7 2.2 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Psest_1031 +0.7 3.9 Uncharacterized protein conserved in bacteria compare
Psest_3890 +0.7 1.0 Multisubunit Na+/H+ antiporter, MnhB subunit compare
Psest_3250 +0.7 2.0 Rho termination factor, N-terminal domain. compare
Psest_0845 +0.7 0.7 hypothetical protein compare
Psest_3116 +0.7 3.3 electron transport complex, RnfABCDGE type, G subunit compare
Psest_1279 +0.7 1.7 hypothetical protein compare
Psest_2227 +0.7 2.9 hypothetical protein compare
Psest_2756 +0.7 0.9 hypothetical protein compare
Psest_0368 +0.7 1.3 Transcriptional regulator compare
Psest_1738 +0.7 2.0 flagellar biosynthetic protein FlhF compare
Psest_3881 +0.7 1.0 hypothetical protein compare
Psest_3474 +0.7 1.9 Short-chain dehydrogenases of various substrate specificities compare
Psest_2580 +0.7 1.8 Uncharacterized membrane protein, required for colicin V production compare
Psest_2953 +0.7 1.2 Histone acetyltransferase compare
Psest_1463 +0.7 0.7 SufE protein probably involved in Fe-S center assembly compare
Psest_1655 +0.7 2.4 NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit compare
Psest_4183 +0.7 1.8 PilZ domain. compare
Psest_1439 +0.7 3.4 Transcriptional regulator compare
Psest_1103 +0.7 1.4 GTP-binding protein YchF compare
Psest_3459 +0.7 2.1 hypothetical protein compare
Psest_1270 +0.7 2.0 hypothetical protein compare
Psest_2969 +0.7 2.4 Methylase of chemotaxis methyl-accepting proteins compare
Psest_0064 +0.7 1.6 Transcriptional regulator compare
Psest_0150 +0.7 3.0 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components compare
Psest_1980 +0.7 1.8 Uncharacterized conserved protein compare
Psest_0660 +0.7 2.0 Methyl-accepting chemotaxis protein compare
Psest_0992 +0.7 2.1 Uncharacterized protein conserved in bacteria compare
Psest_0693 +0.7 6.1 His Kinase A (phosphoacceptor) domain./PAS fold./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. compare
Psest_3476 +0.7 0.7 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_0506 +0.7 2.1 Uncharacterized protein, similar to the N-terminal domain of Lon protease compare
Psest_1722 +0.7 3.8 flagellar protein export ATPase FliI compare
Psest_2594 +0.7 1.5 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_1635 +0.7 5.9 Signal transduction histidine kinase compare
Psest_1303 +0.7 1.6 hypothetical protein compare
Psest_0822 +0.7 1.7 Transcriptional regulators compare
Psest_2551 +0.6 4.1 1-aminocyclopropane-1-carboxylate deaminase compare
Psest_4273 +0.6 3.4 Lysophospholipase compare
Psest_2670 +0.6 3.0 Uncharacterized conserved protein compare
Psest_4209 +0.6 1.2 Uncharacterized conserved small protein compare
Psest_1313 +0.6 1.3 Uncharacterized conserved small protein compare
Psest_1381 +0.6 2.3 Predicted alpha/beta hydrolase compare
Psest_0363 +0.6 2.0 tripartite ATP-independent periplasmic transporter solute receptor, DctP family compare
Psest_0999 +0.6 1.5 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_0114 +0.6 1.7 RNA polymerase sigma factor, sigma-70 family compare
Psest_1055 +0.6 3.7 Saccharopine dehydrogenase and related proteins compare
Psest_3042 +0.6 0.7 Nitrate reductase cytochrome c-type subunit compare
Psest_2962 +0.6 3.7 Flagellar basal body L-ring protein compare
Psest_0014 +0.6 1.6 PilZ domain. compare
Psest_0362 +0.6 2.7 TRAP-type C4-dicarboxylate transport system, small permease component compare
Psest_1856 +0.6 1.4 Permeases of the drug/metabolite transporter (DMT) superfamily compare
Psest_4267 +0.6 1.7 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_1720 +0.6 3.1 flagellar motor switch protein FliG compare
Psest_3115 +0.6 3.1 electron transport complex, RnfABCDGE type, D subunit compare
Psest_3700 +0.6 0.9 hypothetical protein compare
Psest_1462 +0.6 2.5 3-oxoacyl-[acyl-carrier-protein] synthase III compare
Psest_1474 +0.6 2.2 phosphoribosylaminoimidazole synthetase compare
Psest_1619 +0.6 1.9 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 compare
Psest_1878 +0.6 1.5 Uncharacterized protein conserved in bacteria compare
Psest_3005 +0.6 1.8 Fructose-2,6-bisphosphatase compare
Psest_3998 +0.6 2.8 glutamate--cysteine ligase compare
Psest_2963 +0.6 2.7 flagellar basal-body rod protein FlgG, Gram-negative bacteria compare
Psest_2862 +0.6 3.4 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 compare
Psest_1468 +0.6 1.7 hypothetical protein compare
Psest_1939 +0.6 2.3 Tetratricopeptide repeat. compare
Psest_0243 +0.6 0.7 hypothetical protein compare
Psest_0828 +0.6 2.0 Nitric oxide reductase activation protein compare
Psest_2864 +0.6 1.5 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_2329 +0.6 3.9 Transcriptional regulator compare
Psest_4243 +0.6 0.8 type VI secretion lipoprotein, VC_A0113 family compare
Psest_2748 +0.6 0.7 Transcriptional regulator compare
Psest_1740 +0.6 2.4 RNA polymerase sigma factor, FliA/WhiG family compare
Psest_2448 +0.6 1.8 AraC-type DNA-binding domain-containing proteins compare
Psest_2964 +0.6 2.2 flagellar basal-body rod protein FlgF compare
Psest_3084 +0.6 1.0 methyltransferase, putative compare
Psest_1659 +0.6 1.2 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit compare
Psest_1723 +0.6 2.1 flagellar export protein FliJ compare
Psest_0743 +0.6 1.9 adenosine deaminase compare
Psest_1018 +0.6 2.1 ribosomal protein L11 methyltransferase compare
Psest_1197 +0.6 1.6 Ureidoglycolate hydrolase compare
Psest_3317 +0.6 1.7 Phosphotransferase System HPr (HPr) Family compare
Psest_0006 +0.6 1.2 alkyl hydroperoxide reductase, F subunit compare
Psest_1048 +0.6 2.7 Uncharacterized paraquat-inducible protein A compare
Psest_0484 +0.6 1.4 hypothetical protein compare
Psest_2330 +0.6 3.6 2-dehydropantoate 2-reductase compare
Psest_1001 +0.6 0.9 hypothetical protein compare
Psest_2764 +0.6 0.7 hypothetical protein compare
Psest_1434 +0.6 1.7 NADPH:quinone reductase and related Zn-dependent oxidoreductases compare
Psest_0987 +0.6 1.3 Predicted periplasmic or secreted lipoprotein compare
Psest_2247 +0.5 2.2 Protein-tyrosine-phosphatase compare
Psest_2885 +0.5 1.6 Acyl carrier protein compare
Psest_3527 +0.5 1.1 Pseudouridylate synthases, 23S RNA-specific compare
Psest_1235 +0.5 2.4 Leucyl aminopeptidase compare
Psest_3865 +0.5 2.3 Predicted integral membrane protein (DUF2269). compare
Psest_2260 +0.5 4.5 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_3351 +0.5 2.2 peptide chain release factor 3 compare
Psest_2852 +0.5 1.5 Outer membrane lipoprotein compare
Psest_3422 +0.5 2.5 hypothetical protein compare
Psest_0538 +0.5 5.2 Signal transduction histidine kinase compare
Psest_3670 +0.5 3.0 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
Psest_4102 +0.5 1.6 peroxiredoxin, Ohr subfamily compare
Psest_0402 +0.5 1.0 glycosyltransferase, MGT family compare
Psest_1238 +0.5 2.0 Predicted membrane protein/domain compare
Psest_0687 +0.5 2.8 ATP phosphoribosyltransferase, regulatory subunit compare
Psest_0482 +0.5 1.3 yqiA-like hydrolase, affects the cell envelope (from data) compare
Psest_3008 +0.5 1.2 cobyric acid synthase CobQ compare
Psest_1069 +0.5 2.6 Protease II compare
Psest_1511 +0.5 1.5 Predicted redox protein, regulator of disulfide bond formation compare
Psest_2188 +0.5 2.2 AraC-type DNA-binding domain-containing proteins compare
Psest_0457 +0.5 1.2 Lipopolysaccharide kinase (Kdo/WaaP) family. compare
Psest_0175 +0.5 2.1 Xaa-Pro aminopeptidase compare
Psest_4082 +0.5 1.1 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Pseudomonas stutzeri RCH2 in stress experiments

For stress MreB Perturbing Compound A22 across organisms