Experiment set11H36 for Pseudomonas stutzeri RCH2

Compare to:

LB with Vancomycin Hydrochloride Hydrate 0.016 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
Psest_2325 +2.7 17.6 alpha-L-glutamate ligase-related protein compare
Psest_2324 +2.7 19.4 hypothetical protein compare
Psest_2232 +2.5 16.3 UTP-glucose-1-phosphate uridylyltransferase compare
Psest_2229 +2.4 5.9 Uncharacterized protein conserved in bacteria compare
Psest_2973 +2.3 10.3 Flagellar biosynthesis/type III secretory pathway chaperone compare
Psest_2323 +2.3 14.0 Uncharacterized protein conserved in archaea compare
Psest_1723 +2.3 8.3 flagellar export protein FliJ compare
Psest_1720 +2.3 11.3 flagellar motor switch protein FliG compare
Psest_1719 +2.2 7.4 flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) compare
Psest_0993 +2.2 11.5 Glucose-6-phosphate isomerase compare
Psest_1840 +2.1 18.4 Undecaprenyl-phosphate glucose phosphotransferase compare
Psest_0417 +2.1 5.0 Acyl-CoA dehydrogenases compare
Psest_1740 +2.1 10.3 RNA polymerase sigma factor, FliA/WhiG family compare
Psest_1737 +2.0 7.4 flagellar biosynthesis protein FlhA compare
Psest_1731 +2.0 5.0 flagellar biosynthetic protein FliO compare
Psest_1722 +2.0 10.7 flagellar protein export ATPase FliI compare
Psest_2066 +2.0 2.5 ABC-type uncharacterized transport system, permease component compare
Psest_2965 +1.9 14.2 fagellar hook-basal body proteins compare
Psest_3720 +1.9 14.2 penicillin-binding protein, 1A family compare
Psest_1729 +1.9 7.6 flagellar motor switch protein FliM compare
Psest_2958 +1.9 12.1 flagellar hook-associated protein 3 compare
Psest_2964 +1.9 7.1 flagellar basal-body rod protein FlgF compare
Psest_2507 +1.8 12.4 Flagellin and related hook-associated proteins compare
Psest_1734 +1.8 6.6 flagellar biosynthetic protein FliR compare
Psest_1735 +1.8 7.1 flagellar biosynthetic protein FlhB compare
Psest_2959 +1.8 12.8 flagellar hook-associated protein FlgK compare
Psest_2961 +1.8 3.9 Flagellar basal-body P-ring protein compare
Psest_1732 +1.7 4.2 flagellar biosynthetic protein FliP compare
Psest_2962 +1.7 8.0 Flagellar basal body L-ring protein compare
Psest_0722 +1.7 7.7 Predicted ATPase compare
Psest_2504 +1.6 5.1 flagellar biosynthetic protein FliS compare
Psest_3988 +1.6 7.3 phosphoenolpyruvate carboxykinase (ATP) compare
Psest_2963 +1.6 6.7 flagellar basal-body rod protein FlgG, Gram-negative bacteria compare
Psest_1661 +1.6 3.3 Membrane-associated lipoprotein involved in thiamine biosynthesis compare
Psest_3159 +1.6 6.1 phosphoribosylformylglycinamidine synthase, single chain form compare
Psest_3377 +1.5 2.0 FKBP-type peptidyl-prolyl cis-trans isomerases 2 compare
Psest_2960 +1.5 7.6 flagellar rod assembly protein/muramidase FlgJ compare
Psest_3399 +1.5 1.3 Uncharacterized protein conserved in bacteria compare
Psest_2018 +1.5 3.4 Uncharacterized conserved protein compare
Psest_1249 +1.5 6.3 serine O-acetyltransferase compare
Psest_0414 +1.5 3.9 biotin biosynthesis protein BioC compare
Psest_1050 +1.4 10.0 Paraquat-inducible protein B compare
Psest_1738 +1.4 4.7 flagellar biosynthetic protein FlhF compare
Psest_2862 +1.4 6.8 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 compare
Psest_1728 +1.4 3.6 Flagellar basal body-associated protein compare
Psest_1718 +1.4 3.8 flagellar hook-basal body complex protein FliE compare
Psest_2532 +1.4 2.5 Uncharacterized protein conserved in bacteria compare
Psest_0496 +1.4 5.9 flagellar motor stator protein MotA compare
Psest_2966 +1.4 6.1 Flagellar hook capping protein compare
Psest_0959 +1.3 2.2 Uncharacterized protein conserved in bacteria compare
Psest_2538 +1.3 2.9 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases compare
Psest_1692 +1.3 6.0 conserved hypothetical protein, YceG family compare
Psest_3476 +1.3 1.8 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_0497 +1.3 4.3 Flagellar motor protein compare
Psest_1474 +1.3 5.3 phosphoribosylaminoimidazole synthetase compare
Psest_1744 +1.3 6.5 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain compare
Psest_3177 +1.3 2.3 hypothetical protein compare
Psest_2971 +1.3 5.7 flagella basal body P-ring formation protein FlgA compare
Psest_3490 +1.3 3.9 Signal transduction histidine kinase, nitrate/nitrite-specific compare
Psest_1048 +1.2 6.2 Uncharacterized paraquat-inducible protein A compare
Psest_3670 +1.2 7.0 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
Psest_3938 +1.2 2.5 Uncharacterized protein conserved in bacteria compare
Psest_2968 +1.2 6.1 flagellar basal-body rod protein FlgB compare
Psest_1749 +1.2 5.0 Chemotaxis signal transduction protein compare
Psest_0243 +1.2 1.3 hypothetical protein compare
Psest_2531 +1.2 7.9 cytochrome c oxidase accessory protein FixG compare
Psest_1049 +1.2 2.6 Uncharacterized paraquat-inducible protein A compare
Psest_1017 +1.2 6.2 Protein of unknown function (DUF3426). compare
Psest_1745 +1.2 3.7 Flagellar motor component compare
Psest_2855 +1.2 1.3 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Psest_0455 +1.2 5.5 ADP-heptose:LPS heptosyltransferase compare
Psest_1721 +1.2 2.9 Flagellar biosynthesis/type III secretory pathway protein compare
Psest_2505 +1.1 5.8 Flagellar capping protein compare
Psest_2344 +1.1 3.3 Methyl-accepting chemotaxis protein compare
Psest_0718 +1.1 2.4 nicotinate-nucleotide pyrophosphorylase compare
Psest_1743 +1.1 4.0 Chemotaxis protein histidine kinase and related kinases compare
Psest_0823 +1.1 2.2 Transcriptional regulators compare
Psest_1741 +1.1 1.3 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_0459 +1.1 5.7 Predicted carbamoyl transferase, NodU family compare
Psest_3122 +1.1 4.3 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Psest_3112 +1.1 3.7 electron transport complex, RnfABCDGE type, A subunit compare
Psest_1733 +1.1 2.9 flagellar biosynthetic protein FliQ compare
Psest_3790 +1.0 5.9 Cytochrome c5 compare
Psest_0415 +1.0 2.4 dethiobiotin synthase compare
Psest_1994 +1.0 2.8 Amidases related to nicotinamidase compare
Psest_3531 +1.0 1.5 Peptidase propeptide and YPEB domain. compare
Psest_0660 +1.0 2.7 Methyl-accepting chemotaxis protein compare
Psest_0740 +1.0 1.4 Transcriptional regulator compare
Psest_3936 +1.0 1.9 ATP-dependent protease HslVU, peptidase subunit compare
Psest_3354 +0.9 2.8 1-phosphofructokinase (EC 2.7.1.56) (from data) compare
Psest_2138 +0.9 2.0 RND family efflux transporter, MFP subunit compare
Psest_1146 +0.9 3.2 Protein of unknown function, DUF481. compare
Psest_3336 +0.9 3.9 Membrane proteins related to metalloendopeptidases compare
Psest_0368 +0.9 1.1 Transcriptional regulator compare
Psest_3114 +0.9 4.1 electron transport complex, RnfABCDGE type, C subunit compare
Psest_2579 +0.9 4.0 amidophosphoribosyltransferase compare
Psest_2527 +0.9 4.2 cytochrome c oxidase, cbb3-type, subunit I compare
Psest_1746 +0.9 3.7 Flagellar motor protein compare
Psest_3908 +0.9 1.4 Cytochrome c553 compare
Psest_1635 +0.9 8.0 Signal transduction histidine kinase compare
Psest_1292 +0.9 4.5 monothiol glutaredoxin, Grx4 family compare
Psest_2975 +0.9 1.7 tRNA_Arg_CCT compare
Psest_0537 +0.9 1.4 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase compare
Psest_2458 +0.9 2.1 MoxR-like ATPases compare
Psest_3693 +0.9 2.3 Glycosyltransferases involved in cell wall biogenesis compare
Psest_1424 +0.9 2.5 Lipoate-protein ligase A compare
Psest_1103 +0.9 2.5 GTP-binding protein YchF compare
Psest_2000 +0.9 3.2 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_0992 +0.9 2.0 Uncharacterized protein conserved in bacteria compare
Psest_2894 +0.9 1.7 addiction module antidote protein, HigA family compare
Psest_0320 +0.9 2.5 ABC-type multidrug transport system, ATPase component compare
Psest_0437 +0.8 2.3 hypothetical protein compare
Psest_2911 +0.8 2.0 Protein of unknown function (DUF2945). compare
Psest_1655 +0.8 2.3 NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit compare
Psest_2260 +0.8 6.8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_1631 +0.8 1.8 Uncharacterized conserved small protein compare
Psest_3367 +0.8 1.3 translation initation factor SUI1, putative, prokaryotic compare
Psest_3455 +0.8 3.0 Dihaem cytochrome c. compare
Psest_0061 +0.8 1.4 hypothetical protein compare
Psest_3339 +0.8 3.6 Signal transduction histidine kinase compare
Psest_2967 +0.8 4.2 flagellar basal-body rod protein FlgC compare
Psest_3518 +0.8 0.8 Transcriptional regulators compare
Psest_4160 +0.8 2.9 RNA polymerase sigma factor, FliA/WhiG family compare
Psest_2090 +0.8 2.5 Protein of unknown function (DUF2970). compare
Psest_1248 +0.8 3.0 RNA methyltransferase, TrmH family, group 1 compare
Psest_3413 +0.8 1.9 hypothetical protein compare
Psest_0867 +0.8 1.8 hypothetical protein compare
Psest_3669 +0.8 3.1 Uncharacterized protein affecting Mg2+/Co2+ transport compare
Psest_3973 +0.8 1.3 Anti-sigma regulatory factor (Ser/Thr protein kinase) compare
Psest_3819 +0.8 2.6 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Psest_1305 +0.8 1.6 Heat shock protein compare
Psest_1367 +0.8 2.8 hypothetical protein compare
Psest_1115 +0.8 1.0 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 compare
Psest_2775 +0.8 2.5 Glycerol-3-phosphate dehydrogenase compare
Psest_0146 +0.8 2.5 Uncharacterized protein involved in outer membrane biogenesis compare
Psest_1681 +0.8 2.1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E compare
Psest_4134 +0.8 1.2 Uncharacterized protein conserved in bacteria compare
Psest_0678 +0.8 2.0 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region compare
Psest_1765 +0.8 2.7 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_2901 +0.8 0.7 hypothetical protein compare
Psest_2801 +0.7 2.8 hypothetical protein compare
Psest_1522 +0.7 2.2 hypothetical protein compare
Psest_2015 +0.7 1.8 Type II secretory pathway, component PulD compare
Psest_1121 +0.7 3.3 Hypoxanthine-guanine phosphoribosyltransferase compare
Psest_4042 +0.7 2.2 hypothetical protein compare
Psest_3395 +0.7 0.7 hypothetical protein compare
Psest_3031 +0.7 0.8 hypothetical protein compare
Psest_1489 +0.7 2.6 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases compare
Psest_2442 +0.7 1.0 hypothetical protein compare
Psest_0191 +0.7 0.6 PAS domain S-box compare
Psest_3361 +0.7 2.4 Uncharacterized protein conserved in bacteria compare
Psest_3077 +0.7 2.6 Protein of unknown function (DUF3203). compare
Psest_1008 +0.7 1.0 hypothetical protein compare
Psest_2899 +0.7 1.2 hypothetical protein compare
Psest_0237 +0.7 2.8 intracellular protease, PfpI family compare
Psest_0988 +0.7 0.8 Protein of unknown function (DUF2845). compare
Psest_3850 +0.7 0.5 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_0412 +0.7 3.6 8-amino-7-oxononanoate synthase compare
Psest_2969 +0.7 2.5 Methylase of chemotaxis methyl-accepting proteins compare
Psest_0401 +0.7 2.0 isopentenyl-diphosphate delta-isomerase, type 2 compare
Psest_4397 +0.7 3.5 hypothetical protein compare
Psest_3979 +0.7 1.1 Fructose-2,6-bisphosphatase compare
Psest_1791 +0.7 1.4 ABC-type transport system, involved in lipoprotein release, permease component compare
Psest_3651 +0.7 1.9 2-phosphoglycolate phosphatase, prokaryotic compare
Psest_0952 +0.7 1.0 Uncharacterized conserved protein compare
Psest_3550 +0.7 1.0 3,4-dihydroxy-2-butanone 4-phosphate synthase compare
Psest_3736 +0.7 2.0 Uncharacterized protein conserved in bacteria compare
Psest_3662 +0.7 1.0 DnaJ-domain-containing proteins 1 compare
Psest_0662 +0.7 1.5 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_3437 +0.7 1.9 diguanylate cyclase (GGDEF) domain compare
Psest_1963 +0.7 1.5 Peptidase inhibitor I78 family. compare
Psest_0413 +0.7 2.2 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) compare
Psest_1451 +0.7 2.0 Uncharacterized ABC-type transport system, permease components compare
Psest_3762 +0.7 2.3 iron donor protein CyaY compare
Psest_2047 +0.7 1.8 Signal transduction histidine kinase compare
Psest_1974 +0.7 1.4 integration host factor, alpha subunit compare
Psest_1414 +0.7 2.6 Lactoylglutathione lyase and related lyases compare
Psest_1303 +0.7 1.6 hypothetical protein compare
Psest_2119 +0.7 1.8 Glycine/D-amino acid oxidases (deaminating) compare
Psest_2674 +0.7 2.4 Protein chain release factor B compare
Psest_1565 +0.6 2.2 RND family efflux transporter, MFP subunit compare
Psest_0632 +0.6 1.1 hypothetical protein compare
Psest_3719 +0.6 3.9 type IV pilus assembly protein PilM compare
Psest_3319 +0.6 2.8 Uncharacterized protein conserved in bacteria compare
Psest_2863 +0.6 2.2 Transcriptional regulator compare
Psest_1952 +0.6 1.8 hypothetical protein compare
Psest_1197 +0.6 1.7 Ureidoglycolate hydrolase compare
Psest_2641 +0.6 3.8 Conserved secreted protein compare
Psest_2988 +0.6 2.5 aspartate kinase, monofunctional class compare
Psest_4216 +0.6 1.6 hypothetical protein compare
Psest_1656 +0.6 0.9 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit compare
Psest_0306 +0.6 4.0 adenosylmethionine-8-amino-7-oxononanoate transaminase compare
Psest_1958 +0.6 2.1 Glutaredoxin-like domain (DUF836). compare
Psest_0828 +0.6 2.6 Nitric oxide reductase activation protein compare
Psest_1406 +0.6 1.7 His Kinase A (phosphoacceptor) domain./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. compare
Psest_1022 +0.6 3.6 Thiol:disulfide interchange protein compare
Psest_1459 +0.6 1.8 hypothetical protein compare
Psest_1466 +0.6 0.8 transcriptional regulator, Spx/MgsR family compare
Psest_0999 +0.6 1.4 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_0170 +0.6 2.6 5,10-methenyltetrahydrofolate synthetase compare


Specific Phenotypes

For 2 genes in this experiment

For stress Vancomycin Hydrochloride Hydrate in Pseudomonas stutzeri RCH2

For stress Vancomycin Hydrochloride Hydrate across organisms