Experiment set11H30 for Pseudomonas stutzeri RCH2

Compare to:

LB with Fusidic acid sodium salt 0.016 mg/ml

200 most important genes:

  gene name fitness t score description  
Psest_3648 -5.5 -7.6 anthranilate phosphoribosyltransferase compare
Psest_2584 -4.8 -6.4 Phosphoribosylanthranilate isomerase compare
Psest_3031 -4.8 -1.2 hypothetical protein compare
Psest_1492 -4.6 -6.3 DNA-binding ferritin-like protein (oxidative damage protectant) compare
Psest_0062 -4.2 -14.8 tryptophan synthase, alpha subunit compare
Psest_0309 -4.2 -1.8 RND family efflux transporter, MFP subunit compare
Psest_3228 -4.1 -9.6 Zn-dependent protease with chaperone function compare
Psest_0311 -3.9 -7.9 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family compare
Psest_0310 -3.9 -2.7 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family compare
Psest_0063 -3.8 -13.6 tryptophan synthase, beta subunit compare
Psest_3647 -3.4 -8.4 Indole-3-glycerol phosphate synthase compare
Psest_4219 -3.1 -2.1 DNA polymerase I compare
Psest_0520 -3.1 -1.1 hypothetical protein compare
Psest_2945 -2.9 -1.6 septum site-determining protein MinC compare
Psest_3650 -2.8 -13.8 anthranilate synthase component I, non-proteobacterial lineages compare
Psest_0161 -2.7 -2.9 Membrane-bound metallopeptidase compare
Psest_0514 -2.5 -9.2 lytic murein transglycosylase B compare
Psest_4078 -2.5 -2.8 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D compare
Psest_0697 -2.4 -3.1 ribosomal protein L9 compare
Psest_0845 -2.4 -1.0 hypothetical protein compare
Psest_1871 -2.3 -9.5 Predicted esterase of the alpha-beta hydrolase superfamily compare
Psest_2304 -2.3 -1.4 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family compare
Psest_0691 -2.3 -12.0 ribonuclease R compare
Psest_2872 -2.2 -1.3 protein RecA compare
Psest_4191 -2.2 -3.8 Transcriptional regulator compare
Psest_1167 -2.0 -1.3 hypothetical protein compare
Psest_2023 -2.0 -4.5 isocitrate dehydrogenase, NADP-dependent, monomeric type compare
Psest_2946 -1.9 -1.8 septum site-determining protein MinD compare
Psest_1679 -1.9 -2.5 ribonuclease, Rne/Rng family compare
Psest_2011 -1.8 -8.6 Predicted permease compare
Psest_1012 -1.8 -4.2 Signal transduction histidine kinase compare
Psest_1510 -1.8 -3.1 Putative Zn-dependent protease, contains TPR repeats compare
Psest_3456 -1.8 -1.9 RNA polymerase sigma factor, sigma-70 family compare
Psest_0028 -1.8 -4.8 Coproporphyrinogen III oxidase compare
Psest_1879 -1.8 -3.2 Trk-type K+ transport systems, membrane components compare
Psest_2333 -1.7 -1.2 Protein of unknown function (DUF3359). compare
Psest_0031 -1.7 -1.8 Uncharacterized conserved protein compare
Psest_3649 -1.7 -7.4 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase compare
Psest_1922 -1.7 -8.3 aminopeptidase N, Escherichia coli type compare
Psest_4142 -1.7 -1.3 hypothetical protein compare
Psest_1306 -1.6 -1.9 hypothetical protein compare
Psest_3306 -1.6 -4.3 conserved hypothetical integral membrane protein compare
Psest_3878 -1.5 -2.5 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_0020 -1.5 -4.2 K+ transport systems, NAD-binding component compare
Psest_1724 -1.5 -2.9 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) compare
Psest_2285 -1.5 -3.5 ATP-dependent protease La compare
Psest_0515 -1.4 -4.4 rare lipoprotein A compare
Psest_3129 -1.4 -1.1 tyrosine recombinase XerD compare
Psest_2901 -1.4 -1.7 hypothetical protein compare
Psest_0260 -1.4 -1.4 Cell division protein compare
Psest_0521 -1.4 -7.6 lytic murein transglycosylase compare
Psest_3391 -1.4 -1.7 Uncharacterized protein conserved in bacteria compare
Psest_3177 -1.4 -1.2 hypothetical protein compare
Psest_0442 -1.4 -1.3 ATPases of the AAA+ class compare
Psest_2025 -1.4 -1.0 cold shock domain protein CspD compare
Psest_0958 -1.4 -5.1 Oligoketide cyclase/lipid transport protein compare
Psest_2561 -1.4 -0.9 hypothetical protein compare
Psest_3478 -1.3 -1.2 Cytochrome B561 compare
Psest_0257 -1.3 -2.5 Predicted Zn-dependent peptidases compare
Psest_2613 -1.3 -1.5 hypothetical protein compare
Psest_0759 -1.3 -1.7 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT). compare
Psest_2712 -1.3 -3.9 Surface lipoprotein compare
Psest_1371 -1.3 -4.4 hypothetical protein compare
Psest_3351 -1.3 -4.6 peptide chain release factor 3 compare
Psest_0067 -1.3 -2.3 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain compare
Psest_0852 -1.3 -5.0 glucose-6-phosphate 1-dehydrogenase compare
Psest_1491 -1.2 -2.0 Cold shock proteins compare
Psest_4370 -1.2 -2.9 Multisubunit Na+/H+ antiporter, MnhC subunit compare
Psest_1950 -1.2 -8.0 D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family compare
Psest_3910 -1.2 -1.5 Uncharacterized protein conserved in bacteria compare
Psest_1777 -1.2 -4.2 hypothetical protein compare
Psest_3419 -1.2 -4.9 Predicted transcriptional regulators compare
Psest_3767 -1.2 -2.9 tyrosine recombinase XerC compare
Psest_3383 -1.2 -3.5 Uncharacterized protein conserved in bacteria compare
Psest_0209 -1.2 -1.5 membrane protein AbrB duplication compare
Psest_2566 -1.1 -0.9 Uncharacterized protein conserved in bacteria compare
Psest_1765 -1.1 -5.2 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_0987 -1.1 -2.0 Predicted periplasmic or secreted lipoprotein compare
Psest_3816 -1.1 -1.0 DNA-directed RNA polymerase, omega subunit compare
Psest_0969 -1.1 -1.2 transcription elongation factor GreA compare
Psest_3185 -1.1 -1.4 MoxR-like ATPases compare
Psest_0708 -1.1 -1.1 outer membrane assembly lipoprotein YfiO compare
Psest_3247 -1.1 -1.4 Uncharacterized membrane protein compare
Psest_0414 -1.1 -2.9 biotin biosynthesis protein BioC compare
Psest_0575 -1.1 -0.8 HrpA-like helicases compare
Psest_4044 -1.1 -1.3 type I site-specific deoxyribonuclease, HsdR family compare
Psest_0259 -1.1 -1.1 cell division ATP-binding protein FtsE compare
Psest_1837 -1.1 -3.5 Endoglucanase compare
Psest_0998 -1.1 -2.0 poly(A) polymerase compare
Psest_0844 -1.1 -3.2 High-affinity Fe2+/Pb2+ permease compare
Psest_3100 -1.1 -3.4 RNA polymerase sigma factor RpoE compare
Psest_4021 -1.1 -3.0 hypothetical protein compare
Psest_0082 -1.1 -2.3 Domain of unknown function (DUF892). compare
Psest_3904 -1.0 -1.0 hypothetical protein compare
Psest_2138 -1.0 -2.3 RND family efflux transporter, MFP subunit compare
Psest_2718 -1.0 -1.0 hypothetical protein compare
Psest_1660 -1.0 -1.5 NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit compare
Psest_0466 -1.0 -2.9 Lipopolysaccharide kinase (Kdo/WaaP) family. compare
Psest_2775 -1.0 -2.6 Glycerol-3-phosphate dehydrogenase compare
Psest_0279 -1.0 -3.1 methionine biosynthesis protein MetW compare
Psest_3303 -1.0 -3.4 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) compare
Psest_2018 -1.0 -1.7 Uncharacterized conserved protein compare
Psest_2581 -1.0 -1.4 Uncharacterized protein conserved in bacteria compare
Psest_0411 -1.0 -5.0 biotin synthetase compare
Psest_0922 -1.0 -2.1 alkylhydroperoxidase AhpD family core domain compare
Psest_4276 -1.0 -1.8 hypothetical protein compare
Psest_2001 -1.0 -1.1 2-phosphoglycolate phosphatase, prokaryotic compare
Psest_1876 -1.0 -2.8 Predicted membrane protein compare
Psest_3145 -1.0 -1.1 hypothetical protein compare
Psest_1919 -1.0 -1.6 Uncharacterized membrane protein (homolog of Drosophila rhomboid) compare
Psest_1860 -1.0 -1.5 Uncharacterized conserved protein compare
Psest_1456 -1.0 -2.4 Protein of unknown function (DUF2892). compare
Psest_3296 -1.0 -0.9 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain compare
Psest_0306 -1.0 -6.2 adenosylmethionine-8-amino-7-oxononanoate transaminase compare
Psest_1173 -1.0 -2.7 hypothetical protein compare
Psest_0558 -1.0 -0.7 urease, beta subunit compare
Psest_2768 -1.0 -1.3 Kef-type K+ transport systems, predicted NAD-binding component compare
Psest_3168 -0.9 -1.6 Molybdopterin converting factor, large subunit compare
Psest_1540 -0.9 -1.1 biotin-dependent carboxylase uncharacterized domain compare
Psest_1421 -0.9 -1.9 Glutathione S-transferase compare
Psest_3401 -0.9 -4.1 DNA repair protein RadA compare
Psest_3304 -0.9 -3.5 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Psest_0133 -0.9 -0.7 type VI secretion protein, VC_A0107 family compare
Psest_1227 -0.9 -2.2 Predicted SAM-dependent methyltransferase compare
Psest_1514 -0.9 -2.7 Glycine cleavage system regulatory protein compare
Psest_2899 -0.9 -1.1 hypothetical protein compare
Psest_1535 -0.9 -3.2 FKBP-type peptidyl-prolyl cis-trans isomerases 1 compare
Psest_1639 -0.9 -3.4 23S rRNA (uracil-5-)-methyltransferase RumA compare
Psest_2667 -0.9 -2.5 Uncharacterized protein involved in propionate catabolism compare
Psest_0684 -0.9 -2.8 GTP-binding protein HflX compare
Psest_4298 -0.9 -0.7 Response regulator containing a CheY-like receiver domain and a GGDEF domain compare
Psest_1642 -0.9 -1.8 Uncharacterized protein conserved in bacteria compare
Psest_2591 -0.9 -1.3 3-isopropylmalate dehydratase, large subunit compare
Psest_0413 -0.9 -2.7 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) compare
Psest_1296 -0.9 -5.4 excinuclease ABC, B subunit compare
Psest_0412 -0.9 -4.4 8-amino-7-oxononanoate synthase compare
Psest_1447 -0.9 -2.7 Putative threonine efflux protein compare
Psest_1056 -0.9 -1.0 2-isopropylmalate synthase, bacterial type compare
Psest_2334 -0.9 -6.0 Uncharacterized protein conserved in bacteria compare
Psest_4067 -0.9 -2.6 Predicted membrane protein compare
Psest_0542 -0.8 -4.0 AMP nucleosidase compare
Psest_3810 -0.8 -1.1 orotate phosphoribosyltransferase compare
Psest_4134 -0.8 -1.4 Uncharacterized protein conserved in bacteria compare
Psest_0218 -0.8 -2.2 Acyl-CoA hydrolase compare
Psest_1115 -0.8 -1.8 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 compare
Psest_1856 -0.8 -2.4 Permeases of the drug/metabolite transporter (DMT) superfamily compare
Psest_1134 -0.8 -2.6 alkyl hydroperoxide reductase, F subunit compare
Psest_1312 -0.8 -3.6 ABC-type branched-chain amino acid transport systems, periplasmic component compare
Psest_3862 -0.8 -5.3 phosphoenolpyruvate-protein phosphotransferase compare
Psest_3396 -0.8 -4.7 Predicted ATP-dependent protease conserved
Psest_2589 -0.8 -4.4 3-isopropylmalate dehydrogenase compare
Psest_2736 -0.8 -2.6 Transposase and inactivated derivatives compare
Psest_3307 -0.8 -3.1 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Psest_1417 -0.8 -0.8 hypothetical protein compare
Psest_0417 -0.8 -1.5 Acyl-CoA dehydrogenases compare
Psest_1513 -0.8 -4.0 Peroxiredoxin compare
Psest_1428 -0.8 -1.9 Threonine dehydrogenase and related Zn-dependent dehydrogenases compare
Psest_3084 -0.8 -1.5 methyltransferase, putative compare
Psest_3014 -0.8 -1.1 cob(I)alamin adenosyltransferase compare
Psest_0013 -0.8 -3.4 Lauroyl/myristoyl acyltransferase compare
Psest_1505 -0.8 -0.8 Organic radical activating enzymes compare
Psest_1486 -0.8 -2.1 hypothetical protein compare
Psest_2017 -0.8 -2.7 Predicted acyltransferase compare
Psest_0316 -0.8 -1.6 Cytochrome c556 compare
Psest_0955 -0.8 -3.2 D,L-lactate:H+ symporter (from data) compare
Psest_0400 -0.8 -3.0 Geranylgeranyl pyrophosphate synthase compare
Psest_3110 -0.8 -3.2 Enoyl-CoA hydratase/carnithine racemase compare
Psest_1466 -0.8 -1.7 transcriptional regulator, Spx/MgsR family compare
Psest_0482 -0.8 -1.9 yqiA-like hydrolase, affects the cell envelope (from data) compare
Psest_2091 -0.8 -2.3 Molecular chaperone (small heat shock protein) compare
Psest_3148 -0.7 -0.7 hypothetical protein compare
Psest_2277 -0.7 -2.6 coenzyme PQQ biosynthesis protein A compare
Psest_3651 -0.7 -2.6 2-phosphoglycolate phosphatase, prokaryotic compare
Psest_1445 -0.7 -1.8 Curli assembly protein CsgE. compare
Psest_2643 -0.7 -1.4 Beta-glucosidase-related glycosidases compare
Psest_1339 -0.7 -3.9 ATP-dependent helicase HrpA conserved
Psest_4001 -0.7 -2.7 acetylornithine deacetylase (ArgE) compare
Psest_2764 -0.7 -0.8 hypothetical protein compare
Psest_0148 -0.7 -1.6 nitrate transport ATP-binding subunits C and D compare
Psest_3735 -0.7 -0.9 uncharacterized domain 1 compare
Psest_0191 -0.7 -0.6 PAS domain S-box compare
Psest_0359 -0.7 -1.3 Transcriptional regulators compare
Psest_1179 -0.7 -1.0 2-hydroxy-3-oxopropionate reductase compare
Psest_2411 -0.7 -3.2 PAS domain S-box compare
Psest_1444 -0.7 -1.1 Curli production assembly/transport component CsgF. compare
Psest_0950 -0.7 -1.5 hypothetical protein compare
Psest_3155 -0.7 -1.9 hypothetical protein compare
Psest_2324 -0.7 -5.3 hypothetical protein compare
Psest_4146 -0.7 -2.3 Flagellar basal-body P-ring protein compare
Psest_3884 -0.7 -0.5 Signal transduction histidine kinase compare
Psest_1870 -0.7 -0.7 Transcriptional regulators compare
Psest_1910 -0.7 -1.8 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase compare
Psest_1031 -0.7 -2.6 Uncharacterized protein conserved in bacteria compare
Psest_2976 -0.7 -0.8 hypothetical protein compare
Psest_1884 -0.7 -1.0 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_4366 -0.7 -2.4 Multisubunit Na+/H+ antiporter, MnhG subunit compare
Psest_3190 -0.7 -2.6 pyruvate kinase compare
Psest_1327 -0.7 -3.9 Superfamily II DNA/RNA helicases, SNF2 family compare
Psest_0021 -0.7 -1.9 ribosomal RNA small subunit methyltransferase RsmB compare
Psest_0181 -0.7 -2.8 glycine cleavage system T protein compare


Specific Phenotypes

For 1 genes in this experiment

For stress Fusidic acid sodium salt in Pseudomonas stutzeri RCH2

For stress Fusidic acid sodium salt across organisms