Experiment set11H29 for Pseudomonas stutzeri RCH2

Compare to:

LB with Fusidic acid sodium salt 0.016 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
Psest_0740 +3.5 4.3 Transcriptional regulator compare
Psest_4010 +2.0 3.0 peroxiredoxin, OsmC subfamily compare
Psest_3850 +1.9 1.6 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_3399 +1.7 2.3 Uncharacterized protein conserved in bacteria compare
Psest_3518 +1.5 1.1 Transcriptional regulators compare
Psest_0243 +1.5 2.3 hypothetical protein compare
Psest_3226 +1.5 1.8 Predicted membrane protein compare
Psest_2894 +1.5 3.9 addiction module antidote protein, HigA family compare
Psest_1306 +1.3 2.0 hypothetical protein compare
Psest_0725 +1.3 2.4 Negative regulator of beta-lactamase expression compare
Psest_0999 +1.3 3.7 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_1249 +1.3 5.5 serine O-acetyltransferase compare
Psest_3881 +1.3 1.9 hypothetical protein compare
Psest_2240 +1.2 2.1 hypothetical protein compare
Psest_3113 +1.2 2.7 electron transport complex, RnfABCDGE type, B subunit compare
Psest_1121 +1.2 5.8 Hypoxanthine-guanine phosphoribosyltransferase compare
Psest_2975 +1.1 2.0 tRNA_Arg_CCT compare
Psest_3531 +1.1 1.0 Peptidase propeptide and YPEB domain. compare
Psest_3400 +1.0 1.6 Copper resistance protein D. compare
Psest_3536 +1.0 1.5 hypothetical protein compare
Psest_0722 +1.0 4.8 Predicted ATPase compare
Psest_3762 +1.0 2.8 iron donor protein CyaY compare
Psest_1424 +1.0 2.3 Lipoate-protein ligase A compare
Psest_0872 +1.0 0.9 Helix-turn-helix. compare
Psest_0119 +1.0 2.2 hypothetical protein compare
Psest_3357 +1.0 2.5 Predicted pyrophosphatase compare
Psest_3185 +1.0 2.4 MoxR-like ATPases compare
Psest_0006 +1.0 2.8 alkyl hydroperoxide reductase, F subunit compare
Psest_1282 +0.9 2.2 Amidases related to nicotinamidase compare
Psest_2250 +0.9 3.1 Predicted flavoprotein involved in K+ transport compare
Psest_4406 +0.9 1.6 hypothetical protein compare
Psest_2726 +0.9 1.6 Rhodanese-related sulfurtransferase compare
Psest_3008 +0.9 2.3 cobyric acid synthase CobQ compare
Psest_3114 +0.9 4.8 electron transport complex, RnfABCDGE type, C subunit compare
Psest_4145 +0.9 2.2 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) compare
Psest_2446 +0.9 1.7 acetyl-CoA acetyltransferases compare
Psest_2083 +0.9 3.1 Putative sterol carrier protein compare
Psest_1390 +0.9 2.8 Uncharacterized ABC-type transport system, permease component compare
Psest_3988 +0.9 4.1 phosphoenolpyruvate carboxykinase (ATP) compare
Psest_2771 +0.9 2.9 Predicted membrane protein compare
Psest_0209 +0.9 1.4 membrane protein AbrB duplication compare
Psest_2983 +0.9 1.7 hypothetical protein compare
Psest_3395 +0.9 0.8 hypothetical protein compare
Psest_2798 +0.9 2.4 Truncated hemoglobins compare
Psest_4209 +0.8 1.6 Uncharacterized conserved small protein compare
Psest_2744 +0.8 0.7 Uncharacterized conserved protein compare
Psest_3112 +0.8 3.2 electron transport complex, RnfABCDGE type, A subunit compare
Psest_3853 +0.8 1.5 ABC-type branched-chain amino acid transport systems, ATPase component compare
Psest_3507 +0.8 2.6 FOG: EAL domain compare
Psest_4370 +0.8 1.5 Multisubunit Na+/H+ antiporter, MnhC subunit compare
Psest_4197 +0.8 2.3 general secretion pathway protein J compare
Psest_1173 +0.8 1.9 hypothetical protein compare
Psest_0207 +0.8 2.1 hypothetical protein compare
Psest_2756 +0.8 0.7 hypothetical protein compare
Psest_3115 +0.8 3.3 electron transport complex, RnfABCDGE type, D subunit compare
Psest_3148 +0.8 1.0 hypothetical protein compare
Psest_2500 +0.8 1.5 hypothetical protein compare
Psest_2786 +0.8 0.9 Domain of unknown function (DUF3597). compare
Psest_1805 +0.8 1.3 integration host factor, beta subunit compare
Psest_1595 +0.8 1.1 Copper chaperone compare
Psest_0082 +0.8 2.3 Domain of unknown function (DUF892). compare
Psest_2243 +0.8 0.9 glyceraldehyde-3-phosphate dehydrogenase, type I compare
Psest_1197 +0.8 2.6 Ureidoglycolate hydrolase compare
Psest_0993 +0.8 4.9 Glucose-6-phosphate isomerase compare
Psest_1656 +0.8 1.2 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit compare
Psest_1920 +0.8 0.8 Uncharacterized protein conserved in bacteria compare
Psest_3377 +0.8 0.9 FKBP-type peptidyl-prolyl cis-trans isomerases 2 compare
Psest_2907 +0.8 0.9 Protein of unknown function (DUF3618). compare
Psest_3117 +0.8 2.1 electron transport complex, RnfABCDGE type, E subunit compare
Psest_4095 +0.8 1.9 Uncharacterized protein conserved in bacteria compare
Psest_0533 +0.8 2.9 Sel1 repeat. compare
Psest_2736 +0.7 1.4 Transposase and inactivated derivatives compare
Psest_2434 +0.7 1.2 Protein of unknown function (DUF2892). compare
Psest_2520 +0.7 0.7 Predicted SAM-dependent methyltransferase compare
Psest_0675 +0.7 1.7 Predicted periplasmic lipoprotein compare
Psest_3546 +0.7 1.1 Phosphatidylglycerophosphatase A and related proteins compare
Psest_0450 +0.7 2.9 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) compare
Psest_2953 +0.7 1.3 Histone acetyltransferase compare
Psest_1655 +0.7 2.2 NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit compare
Psest_0919 +0.7 0.7 Permeases of the drug/metabolite transporter (DMT) superfamily compare
Psest_3323 +0.7 2.4 ribonuclease, Rne/Rng family compare
Psest_1731 +0.7 1.5 flagellar biosynthetic protein FliO compare
Psest_1215 +0.7 1.0 Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) compare
Psest_0182 +0.7 2.7 glycine cleavage system H protein compare
Psest_1235 +0.7 2.5 Leucyl aminopeptidase compare
Psest_0886 +0.7 1.7 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain compare
Psest_2885 +0.7 1.3 Acyl carrier protein compare
Psest_2923 +0.7 1.5 hypothetical protein compare
Psest_1881 +0.7 2.0 Nitroreductase compare
Psest_2764 +0.7 0.7 hypothetical protein compare
Psest_1619 +0.7 2.1 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 compare
Psest_1565 +0.7 1.7 RND family efflux transporter, MFP subunit compare
Psest_1149 +0.7 1.7 Protein affecting phage T7 exclusion by the F plasmid compare
Psest_4314 +0.7 2.1 ABC-type metal ion transport system, ATPase component compare
Psest_2681 +0.7 1.6 Uncharacterized protein conserved in bacteria compare
Psest_3960 +0.7 1.0 3'(2'),5'-bisphosphate nucleotidase, bacterial compare
Psest_1907 +0.7 1.0 hypothetical protein compare
Psest_1048 +0.7 3.6 Uncharacterized paraquat-inducible protein A compare
Psest_3437 +0.7 1.7 diguanylate cyclase (GGDEF) domain compare
Psest_3087 +0.7 2.5 Transcriptional regulator compare
Psest_2527 +0.7 3.3 cytochrome c oxidase, cbb3-type, subunit I compare
Psest_0227 +0.7 1.4 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific compare
Psest_2405 +0.7 1.1 NAD-dependent protein deacetylases, SIR2 family compare
Psest_1148 +0.7 2.3 Putative heme iron utilization protein compare
Psest_3908 +0.7 1.0 Cytochrome c553 compare
Psest_3698 +0.7 2.3 Predicted exporter compare
Psest_0409 +0.7 0.9 Putative homoserine kinase type II (protein kinase fold) compare
Psest_0115 +0.7 1.1 Predicted integral membrane protein compare
Psest_3932 +0.7 2.5 nitrogen regulation protein NR(I) compare
Psest_0078 +0.7 0.7 hypothetical protein compare
Psest_0455 +0.7 3.1 ADP-heptose:LPS heptosyltransferase compare
Psest_1022 +0.7 4.2 Thiol:disulfide interchange protein compare
Psest_4161 +0.7 1.5 Flagellar basal body-associated protein compare
Psest_3545 +0.7 2.0 clan AA aspartic protease, TIGR02281 family compare
Psest_0889 +0.7 2.8 Lactoylglutathione lyase and related lyases compare
Psest_0299 +0.7 1.6 Chemotaxis signal transduction protein compare
Psest_0307 +0.7 3.1 Cytochrome B561 compare
Psest_2757 +0.6 0.9 hypothetical protein compare
Psest_1745 +0.6 2.3 Flagellar motor component compare
Psest_1293 +0.6 0.8 VanZ like family. compare
Psest_0506 +0.6 2.1 Uncharacterized protein, similar to the N-terminal domain of Lon protease compare
Psest_0510 +0.6 1.9 iojap-like ribosome-associated protein compare
Psest_1840 +0.6 5.4 Undecaprenyl-phosphate glucose phosphotransferase compare
Psest_3790 +0.6 3.6 Cytochrome c5 compare
Psest_1720 +0.6 3.6 flagellar motor switch protein FliG compare
Psest_0459 +0.6 4.2 Predicted carbamoyl transferase, NodU family compare
Psest_3836 +0.6 1.7 L-lactate permease compare
Psest_3670 +0.6 3.7 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
Psest_3289 +0.6 2.3 prepilin-type N-terminal cleavage/methylation domain compare
Psest_1736 +0.6 2.4 Cu/Zn superoxide dismutase compare
Psest_2956 +0.6 1.9 Uncharacterized conserved protein compare
Psest_1563 +0.6 0.9 Protein of unknown function (DUF548). compare
Psest_1464 +0.6 2.9 Selenocysteine lyase compare
Psest_1378 +0.6 2.6 hypothetical protein compare
Psest_2570 +0.6 2.0 Transcriptional regulator compare
Psest_3697 +0.6 1.3 Outer membrane lipoprotein carrier protein LolA. compare
Psest_1139 +0.6 1.8 PAS domain S-box compare
Psest_3701 +0.6 1.6 3-oxoacyl-(acyl-carrier-protein) synthase compare
Psest_4158 +0.6 1.1 Flagellar motor protein compare
Psest_2475 +0.6 2.0 Acyl-CoA dehydrogenases compare
Psest_3502 +0.6 1.5 flavoprotein, HI0933 family/uncharacterized flavoprotein, PP_4765 family compare
Psest_1599 +0.6 1.5 heavy metal sensor kinase compare
Psest_2796 +0.6 1.4 HNH endonuclease. compare
Psest_1538 +0.6 1.6 Uncharacterized protein conserved in bacteria compare
Psest_2428 +0.6 1.7 hypothetical protein compare
Psest_1610 +0.6 1.4 hypothetical protein compare
Psest_0814 +0.6 1.2 MoxR-like ATPases compare
Psest_2940 +0.6 1.5 Predicted membrane protein compare
Psest_2229 +0.6 0.9 Uncharacterized protein conserved in bacteria compare
Psest_0294 +0.6 1.8 Putative transcriptional regulator compare
Psest_0662 +0.6 0.7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_0660 +0.6 1.1 Methyl-accepting chemotaxis protein compare
Psest_2130 +0.6 1.4 exodeoxyribonuclease III compare
Psest_2276 +0.6 2.3 Aldehyde dehydrogenase (EC 1.2.1.3) (from data) compare
Psest_1600 +0.6 1.4 hypothetical protein compare
Psest_1429 +0.6 2.2 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit compare
Psest_2624 +0.6 1.3 hypothetical protein compare
Psest_4366 +0.6 1.9 Multisubunit Na+/H+ antiporter, MnhG subunit compare
Psest_1078 +0.5 1.4 acetyl-CoA:acetoacetate CoA transferase, A subunit (EC 2.8.3.8) (from data) compare
Psest_3391 +0.5 0.8 Uncharacterized protein conserved in bacteria compare
Psest_3979 +0.5 1.1 Fructose-2,6-bisphosphatase compare
Psest_3890 +0.5 0.9 Multisubunit Na+/H+ antiporter, MnhB subunit compare
Psest_2232 +0.5 3.8 UTP-glucose-1-phosphate uridylyltransferase compare
Psest_1238 +0.5 2.6 Predicted membrane protein/domain compare
Psest_3037 +0.5 2.3 Uncharacterized protein conserved in bacteria compare
Psest_3756 +0.5 1.4 hypothetical protein compare
Psest_1801 +0.5 1.9 3-deoxy-7-phosphoheptulonate synthase, class II compare
Psest_1593 +0.5 2.3 hypothetical protein compare
Psest_0296 +0.5 2.2 glutathione synthetase, prokaryotic compare
Psest_0149 +0.5 1.8 nitrate ABC transporter, permease protein compare
Psest_3719 +0.5 3.4 type IV pilus assembly protein PilM compare
Psest_1010 +0.5 3.0 Predicted integral membrane protein compare
Psest_1520 +0.5 1.1 hypothetical protein compare
Psest_3961 +0.5 2.2 NTP pyrophosphohydrolases including oxidative damage repair enzymes compare
Psest_0238 +0.5 2.1 Predicted signal transduction protein compare
Psest_1382 +0.5 1.0 Transcription elongation factor compare
Psest_1392 +0.5 1.0 ABC-type uncharacterized transport systems, ATPase components compare
Psest_0103 +0.5 1.3 triphosphoribosyl-dephospho-CoA synthase MdcB compare
Psest_0144 +0.5 2.2 Fe-S cluster protector protein compare
Psest_3473 +0.5 1.9 hypothetical protein compare
Psest_2626 +0.5 0.8 Flp pilus assembly protein CpaB compare
Psest_1307 +0.5 1.7 Dienelactone hydrolase and related enzymes compare
Psest_2090 +0.5 1.3 Protein of unknown function (DUF2970). compare
Psest_2711 +0.5 1.1 PilZ domain. compare
Psest_1049 +0.5 1.1 Uncharacterized paraquat-inducible protein A compare
Psest_2973 +0.5 1.9 Flagellar biosynthesis/type III secretory pathway chaperone compare
Psest_4335 +0.5 1.0 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems compare
Psest_1230 +0.5 0.9 Uncharacterized protein conserved in bacteria compare
Psest_1017 +0.5 2.6 Protein of unknown function (DUF3426). compare
Psest_0883 +0.5 2.4 hypothetical protein compare
Psest_1902 +0.5 1.6 hypothetical protein compare
Psest_0216 +0.5 2.2 Predicted permeases compare
Psest_1475 +0.5 1.4 Uncharacterized protein conserved in bacteria compare
Psest_3222 +0.5 0.9 Putative threonine efflux protein compare
Psest_1508 +0.5 3.0 succinate CoA transferases compare
Psest_0048 +0.5 2.0 ABC-type multidrug transport system, ATPase and permease components compare
Psest_2855 +0.5 0.8 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Psest_3146 +0.5 0.4 hypothetical protein compare
Psest_1813 +0.5 2.9 pseudaminic acid biosynthesis-associated protein PseG compare
Psest_4403 +0.5 2.3 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment

For stress Fusidic acid sodium salt in Pseudomonas stutzeri RCH2

For stress Fusidic acid sodium salt across organisms