Experiment set11H27 for Pseudomonas stutzeri RCH2

Compare to:

LB with Bacitracin 0.25 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
Psest_2232 +5.2 31.6 UTP-glucose-1-phosphate uridylyltransferase compare
Psest_1733 +4.2 5.3 flagellar biosynthetic protein FliQ compare
Psest_2775 +3.8 8.7 Glycerol-3-phosphate dehydrogenase compare
Psest_1661 +3.7 6.2 Membrane-associated lipoprotein involved in thiamine biosynthesis compare
Psest_1734 +3.6 11.5 flagellar biosynthetic protein FliR compare
Psest_3377 +3.5 5.3 FKBP-type peptidyl-prolyl cis-trans isomerases 2 compare
Psest_1840 +3.5 28.5 Undecaprenyl-phosphate glucose phosphotransferase compare
Psest_1721 +3.4 7.3 Flagellar biosynthesis/type III secretory pathway protein compare
Psest_1013 +3.3 9.2 phosphoribosylamine--glycine ligase compare
Psest_3670 +3.3 17.7 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
Psest_1719 +3.3 14.5 flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) compare
Psest_3159 +3.3 13.6 phosphoribosylformylglycinamidine synthase, single chain form compare
Psest_3338 +3.2 2.8 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain compare
Psest_3112 +3.1 13.3 electron transport complex, RnfABCDGE type, A subunit compare
Psest_1722 +3.1 17.9 flagellar protein export ATPase FliI compare
Psest_3114 +3.1 15.0 electron transport complex, RnfABCDGE type, C subunit compare
Psest_1720 +3.0 15.6 flagellar motor switch protein FliG compare
Psest_1731 +3.0 7.9 flagellar biosynthetic protein FliO compare
Psest_2323 +3.0 19.2 Uncharacterized protein conserved in archaea compare
Psest_1737 +3.0 10.6 flagellar biosynthesis protein FlhA compare
Psest_1655 +3.0 10.1 NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit compare
Psest_0417 +3.0 8.7 Acyl-CoA dehydrogenases compare
Psest_1718 +3.0 8.3 flagellar hook-basal body complex protein FliE compare
Psest_2862 +2.9 12.5 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 compare
Psest_1729 +2.9 10.2 flagellar motor switch protein FliM compare
Psest_0722 +2.9 13.2 Predicted ATPase compare
Psest_1723 +2.8 8.7 flagellar export protein FliJ compare
Psest_3113 +2.8 6.7 electron transport complex, RnfABCDGE type, B subunit compare
Psest_1663 +2.8 5.1 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes compare
Psest_2965 +2.7 19.2 fagellar hook-basal body proteins compare
Psest_0958 +2.7 12.1 Oligoketide cyclase/lipid transport protein compare
Psest_2104 +2.7 4.6 IscR-regulated protein YhgI compare
Psest_0993 +2.6 14.4 Glucose-6-phosphate isomerase compare
Psest_1660 +2.6 4.2 NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit compare
Psest_3115 +2.6 10.6 electron transport complex, RnfABCDGE type, D subunit compare
Psest_3117 +2.5 6.6 electron transport complex, RnfABCDGE type, E subunit compare
Psest_1656 +2.5 4.5 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit compare
Psest_1249 +2.5 10.1 serine O-acetyltransferase compare
Psest_0455 +2.5 9.2 ADP-heptose:LPS heptosyltransferase compare
Psest_1474 +2.5 9.8 phosphoribosylaminoimidazole synthetase compare
Psest_3762 +2.5 6.0 iron donor protein CyaY compare
Psest_1292 +2.5 11.2 monothiol glutaredoxin, Grx4 family compare
Psest_2579 +2.4 9.7 amidophosphoribosyltransferase compare
Psest_1735 +2.4 10.9 flagellar biosynthetic protein FlhB compare
Psest_1824 +2.4 3.7 Sugar transferases involved in lipopolysaccharide synthesis compare
Psest_3790 +2.4 14.3 Cytochrome c5 compare
Psest_3988 +2.4 9.7 phosphoenolpyruvate carboxykinase (ATP) compare
Psest_4003 +2.3 8.6 TIGR00153 family protein compare
Psest_1740 +2.3 9.7 RNA polymerase sigma factor, FliA/WhiG family compare
Psest_2324 +2.3 17.5 hypothetical protein compare
Psest_0678 +2.3 7.2 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region compare
Psest_0959 +2.3 5.0 Uncharacterized protein conserved in bacteria compare
Psest_1728 +2.3 6.1 Flagellar basal body-associated protein compare
Psest_1732 +2.3 5.6 flagellar biosynthetic protein FliP compare
Psest_2325 +2.3 11.2 alpha-L-glutamate ligase-related protein compare
Psest_1049 +2.3 6.6 Uncharacterized paraquat-inducible protein A compare
Psest_3938 +2.2 7.0 Uncharacterized protein conserved in bacteria compare
Psest_2960 +2.2 10.9 flagellar rod assembly protein/muramidase FlgJ compare
Psest_2855 +2.2 2.8 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Psest_2586 +2.2 17.0 FimV N-terminal domain compare
Psest_0497 +2.2 8.9 Flagellar motor protein compare
Psest_2963 +2.2 7.9 flagellar basal-body rod protein FlgG, Gram-negative bacteria compare
Psest_2962 +2.2 6.5 Flagellar basal body L-ring protein compare
Psest_1814 +2.2 10.1 pseudaminic acid biosynthesis N-acetyl transferase compare
Psest_2958 +2.1 13.1 flagellar hook-associated protein 3 compare
Psest_0496 +2.1 9.3 flagellar motor stator protein MotA compare
Psest_2863 +2.1 6.0 Transcriptional regulator compare
Psest_2229 +2.1 4.7 Uncharacterized protein conserved in bacteria compare
Psest_2505 +2.1 11.6 Flagellar capping protein compare
Psest_1813 +2.1 9.5 pseudaminic acid biosynthesis-associated protein PseG compare
Psest_3749 +2.1 12.6 Response regulator of the LytR/AlgR family compare
Psest_2966 +2.1 8.6 Flagellar hook capping protein compare
Psest_0489 +2.1 2.7 phosphoserine phosphatase SerB compare
Psest_3339 +2.0 5.6 Signal transduction histidine kinase compare
Psest_0450 +2.0 7.3 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) compare
Psest_0174 +2.0 3.4 Uncharacterized protein conserved in bacteria compare
Psest_2961 +2.0 2.7 Flagellar basal-body P-ring protein compare
Psest_2959 +2.0 12.8 flagellar hook-associated protein FlgK compare
Psest_1050 +1.9 13.3 Paraquat-inducible protein B compare
Psest_2527 +1.9 8.7 cytochrome c oxidase, cbb3-type, subunit I compare
Psest_1745 +1.9 5.5 Flagellar motor component compare
Psest_2023 +1.9 3.4 isocitrate dehydrogenase, NADP-dependent, monomeric type compare
Psest_1048 +1.9 9.4 Uncharacterized paraquat-inducible protein A compare
Psest_0601 +1.9 4.5 hypothetical protein compare
Psest_3371 +1.9 10.7 type IV pilus modification protein PilV compare
Psest_1315 +1.9 4.0 hypothetical protein compare
Psest_1146 +1.8 8.9 Protein of unknown function, DUF481. compare
Psest_1994 +1.8 5.3 Amidases related to nicotinamidase compare
Psest_1765 +1.8 5.8 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_2973 +1.8 5.9 Flagellar biosynthesis/type III secretory pathway chaperone compare
Psest_3286 +1.8 6.5 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases compare
Psest_0193 +1.8 2.3 conserved hypothetical protein compare
Psest_3768 +1.8 3.4 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E compare
Psest_4335 +1.8 4.2 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems compare
Psest_3372 +1.8 8.4 Tfp pilus assembly protein PilW compare
Psest_1204 +1.7 3.9 Transcriptional regulators compare
Psest_1158 +1.7 9.3 Predicted thiol oxidoreductase compare
Psest_3399 +1.7 2.0 Uncharacterized protein conserved in bacteria compare
Psest_1659 +1.7 2.8 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit compare
Psest_2507 +1.7 10.8 Flagellin and related hook-associated proteins compare
Psest_1704 +1.6 2.5 Dehydrogenases (flavoproteins) compare
Psest_3719 +1.6 9.3 type IV pilus assembly protein PilM compare
Psest_3370 +1.6 7.7 prepilin-type N-terminal cleavage/methylation domain compare
Psest_1772 +1.6 4.6 Aspartate/tyrosine/aromatic aminotransferase compare
Psest_3960 +1.6 2.4 3'(2'),5'-bisphosphate nucleotidase, bacterial compare
Psest_1489 +1.6 3.8 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases compare
Psest_0296 +1.6 6.9 glutathione synthetase, prokaryotic compare
Psest_1121 +1.6 8.5 Hypoxanthine-guanine phosphoribosyltransferase compare
Psest_2531 +1.6 9.6 cytochrome c oxidase accessory protein FixG compare
Psest_1738 +1.6 4.6 flagellar biosynthetic protein FlhF compare
Psest_1111 +1.5 2.3 Flp pilus assembly protein TadD, contains TPR repeats compare
Psest_3565 +1.5 2.7 hypothetical protein compare
Psest_0693 +1.5 12.5 His Kinase A (phosphoacceptor) domain./PAS fold./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. compare
Psest_3843 +1.5 4.9 4-hydroxybenzoate synthetase (chorismate lyase) compare
Psest_3373 +1.5 4.4 Tfp pilus assembly protein PilX compare
Psest_2744 +1.5 1.6 Uncharacterized conserved protein compare
Psest_2504 +1.5 3.5 flagellar biosynthetic protein FliS compare
Psest_1879 +1.4 3.8 Trk-type K+ transport systems, membrane components compare
Psest_2532 +1.4 3.3 Uncharacterized protein conserved in bacteria compare
Psest_2530 +1.4 5.2 cytochrome c oxidase, cbb3-type, subunit III compare
Psest_3998 +1.4 6.0 glutamate--cysteine ligase compare
Psest_1314 +1.4 9.3 Putative Zn-dependent protease compare
Psest_0393 +1.4 4.7 Methylase of chemotaxis methyl-accepting proteins compare
Psest_0177 +1.4 6.3 hypothetical protein compare
Psest_3718 +1.4 5.1 Tfp pilus assembly protein PilN compare
Psest_3374 +1.4 8.5 Tfp pilus assembly protein, tip-associated adhesin PilY1 compare
Psest_3828 +1.4 2.2 zinc-binding alcohol dehydrogenase family protein compare
Psest_2383 +1.4 6.6 Predicted transcriptional regulators compare
Psest_0459 +1.3 6.6 Predicted carbamoyl transferase, NodU family compare
Psest_3937 +1.3 2.5 ATP-dependent protease HslVU, ATPase subunit compare
Psest_1103 +1.3 3.3 GTP-binding protein YchF compare
Psest_1260 +1.3 6.0 type IV pilus biogenesis/stability protein PilW compare
Psest_0175 +1.3 5.2 Xaa-Pro aminopeptidase compare
Psest_1087 +1.3 1.6 uncharacterized peroxidase-related enzyme compare
Psest_2001 +1.3 1.9 2-phosphoglycolate phosphatase, prokaryotic compare
Psest_1724 +1.3 3.5 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) compare
Psest_4316 +1.3 3.2 ABC-type metal ion transport system, periplasmic component/surface antigen compare
Psest_3146 +1.3 2.1 hypothetical protein compare
Psest_4004 +1.3 2.9 Uncharacterized conserved protein compare
Psest_0461 +1.3 6.1 Glycosyltransferase involved in LPS biosynthesis compare
Psest_0484 +1.3 3.9 hypothetical protein compare
Psest_1657 +1.2 1.7 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit compare
Psest_4315 +1.2 2.6 ABC-type metal ion transport system, permease component compare
Psest_2647 +1.2 2.7 SOS-response cell division inhibitor, blocks FtsZ ring formation compare
Psest_0237 +1.2 1.9 intracellular protease, PfpI family compare
Psest_0182 +1.2 4.7 glycine cleavage system H protein compare
Psest_2719 +1.2 2.8 acetylornithine and succinylornithine aminotransferases/succinylornithine transaminase family compare
Psest_0464 +1.2 8.7 Mannosyltransferase OCH1 and related enzymes compare
Psest_2713 +1.2 3.8 hypothetical protein compare
Psest_0115 +1.2 1.9 Predicted integral membrane protein compare
Psest_4193 +1.1 5.0 Predicted signal transduction protein compare
Psest_3715 +1.1 7.8 type IV pilus secretin (or competence protein) PilQ compare
Psest_2003 +1.1 6.0 Cytosine deaminase and related metal-dependent hydrolases compare
Psest_1065 +1.1 1.6 hypothetical protein compare
Psest_2260 +1.1 8.9 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_2641 +1.1 7.4 Conserved secreted protein compare
Psest_2000 +1.1 4.1 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_1695 +1.1 2.2 Tfp pilus assembly protein PilZ compare
Psest_2503 +1.1 3.7 hypothetical protein compare
Psest_0165 +1.1 1.9 protein-export chaperone SecB compare
Psest_0297 +1.1 3.4 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_1017 +1.1 5.8 Protein of unknown function (DUF3426). compare
Psest_3716 +1.1 6.0 Tfp pilus assembly protein PilP compare
Psest_3064 +1.1 2.0 hypothetical protein compare
Psest_3575 +1.1 3.7 Arabinose efflux permease compare
Psest_3573 +1.1 3.1 dTDP-4-dehydrorhamnose reductase compare
Psest_1631 +1.1 1.7 Uncharacterized conserved small protein compare
Psest_3122 +1.0 3.7 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Psest_2892 +1.0 2.5 Transcriptional regulator compare
Psest_0999 +1.0 2.9 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_3731 +1.0 6.7 exopolyphosphatase compare
Psest_3678 +1.0 2.7 acyl-phosphate glycerol 3-phosphate acyltransferase compare
Psest_1762 +1.0 1.8 cytochrome c-type biogenesis protein CcmI compare
Psest_1985 +1.0 2.6 histidinol-phosphate aminotransferase compare
Psest_1743 +1.0 4.1 Chemotaxis protein histidine kinase and related kinases compare
Psest_3922 +1.0 2.8 Response regulator of citrate/malate metabolism compare
Psest_0652 +1.0 1.7 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components compare
Psest_4341 +1.0 2.7 hypothetical protein compare
Psest_1248 +1.0 3.5 RNA methyltransferase, TrmH family, group 1 compare
Psest_1741 +1.0 1.2 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_0300 +1.0 4.3 Methyl-accepting chemotaxis protein compare
Psest_1316 +1.0 6.2 Predicted transmembrane sensor domain compare
Psest_0164 +1.0 0.8 Glutaredoxin, GrxC family compare
Psest_1635 +1.0 8.3 Signal transduction histidine kinase compare
Psest_3212 +1.0 2.6 FKBP-type peptidyl-prolyl cis-trans isomerases 2 compare
Psest_1617 +1.0 2.7 Methylase involved in ubiquinone/menaquinone biosynthesis compare
Psest_2853 +1.0 2.5 hypothetical protein compare
Psest_0457 +1.0 1.2 Lipopolysaccharide kinase (Kdo/WaaP) family. compare
Psest_1947 +1.0 1.0 dihydroorotate dehydrogenase, subfamily 2 compare
Psest_3288 +1.0 6.0 type IV-A pilus assembly ATPase PilB compare
Psest_3116 +1.0 3.6 electron transport complex, RnfABCDGE type, G subunit compare
Psest_2771 +1.0 1.8 Predicted membrane protein compare
Psest_3045 +1.0 1.4 Cold shock proteins compare
Psest_3962 +0.9 0.9 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED compare
Psest_0170 +0.9 3.9 5,10-methenyltetrahydrofolate synthetase compare
Psest_1746 +0.9 3.8 Flagellar motor protein compare
Psest_1223 +0.9 2.9 1,4-dihydroxy-2-naphthoate octaprenyltransferase compare
Psest_1280 +0.9 6.7 TonB-dependent copper receptor compare
Psest_2796 +0.9 3.7 HNH endonuclease. compare
Psest_3664 +0.9 1.3 Predicted phosphotransferase related to Ser/Thr protein kinases compare


Specific Phenotypes

For 37 genes in this experiment

For stress Bacitracin in Pseudomonas stutzeri RCH2

For stress Bacitracin across organisms