Experiment set11H17 for Pseudomonas stutzeri RCH2

Compare to:

LB with Sodium Chloride 200 mM

200 most detrimental genes:

  gene name fitness t score description  
Psest_3047 +2.1 1.9 methionyl-tRNA synthetase/methionyl-tRNA synthetase C-terminal region/beta chain compare
Psest_2066 +2.0 2.6 ABC-type uncharacterized transport system, permease component compare
Psest_1805 +1.8 2.8 integration host factor, beta subunit compare
Psest_0959 +1.7 4.3 Uncharacterized protein conserved in bacteria compare
Psest_1884 +1.6 2.8 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_4128 +1.6 2.0 Universal stress protein UspA and related nucleotide-binding proteins compare
Psest_1840 +1.6 14.6 Undecaprenyl-phosphate glucose phosphotransferase compare
Psest_1249 +1.4 6.3 serine O-acetyltransferase compare
Psest_1819 +1.4 10.6 Nucleoside-diphosphate-sugar epimerases compare
Psest_0655 +1.4 2.6 Chemotaxis signal transduction protein compare
Psest_0457 +1.4 3.4 Lipopolysaccharide kinase (Kdo/WaaP) family. compare
Psest_3391 +1.3 3.3 Uncharacterized protein conserved in bacteria compare
Psest_2023 +1.3 3.6 isocitrate dehydrogenase, NADP-dependent, monomeric type compare
Psest_0737 +1.3 1.5 Cu(I)-responsive transcriptional regulator compare
Psest_3115 +1.2 6.3 electron transport complex, RnfABCDGE type, D subunit compare
Psest_2579 +1.2 4.8 amidophosphoribosyltransferase compare
Psest_4406 +1.2 1.5 hypothetical protein compare
Psest_3762 +1.2 5.2 iron donor protein CyaY compare
Psest_1904 +1.2 2.8 Arabinose efflux permease compare
Psest_1990 +1.2 1.9 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs compare
Psest_2756 +1.1 1.3 hypothetical protein compare
Psest_3727 +1.1 4.3 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases compare
Psest_3136 +1.1 5.3 Putative Mg2+ and Co2+ transporter CorB compare
Psest_3938 +1.1 2.5 Uncharacterized protein conserved in bacteria compare
Psest_1974 +1.1 2.2 integration host factor, alpha subunit compare
Psest_1518 +1.0 2.7 tRNA_Ser_CGA compare
Psest_2383 +1.0 6.3 Predicted transcriptional regulators compare
Psest_0708 +1.0 1.7 outer membrane assembly lipoprotein YfiO compare
Psest_1479 +1.0 3.2 NAD(P)H:quinone oxidoreductase, type IV compare
Psest_3473 +1.0 3.4 hypothetical protein compare
Psest_3670 +1.0 6.5 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
Psest_4273 +1.0 5.2 Lysophospholipase compare
Psest_0717 +1.0 8.3 Protein of unknown function (DUF1631). compare
Psest_1176 +1.0 2.2 Urea transporter compare
Psest_4403 +1.0 4.6 hypothetical protein compare
Psest_2752 +1.0 1.7 Uncharacterized protein conserved in bacteria compare
Psest_3927 +1.0 3.0 thiazole biosynthesis/tRNA modification protein ThiI compare
Psest_3117 +1.0 2.3 electron transport complex, RnfABCDGE type, E subunit compare
Psest_4280 +0.9 2.4 ABC-type spermidine/putrescine transport system, permease component II compare
Psest_1741 +0.9 1.0 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_4211 +0.9 2.2 conserverd hypothetical protein compare
Psest_1197 +0.9 3.0 Ureidoglycolate hydrolase compare
Psest_2312 +0.9 4.6 Small-conductance mechanosensitive channel compare
Psest_1791 +0.9 3.3 ABC-type transport system, involved in lipoprotein release, permease component compare
Psest_0950 +0.9 2.1 hypothetical protein compare
Psest_2988 +0.9 4.3 aspartate kinase, monofunctional class compare
Psest_3490 +0.9 2.9 Signal transduction histidine kinase, nitrate/nitrite-specific compare
Psest_3174 +0.9 5.2 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
Psest_1809 +0.9 4.9 Membrane protein involved in the export of O-antigen and teichoic acid compare
Psest_0716 +0.9 1.2 Protein of unknown function (DUF3094). compare
Psest_1993 +0.9 2.9 Uncharacterized protein conserved in bacteria compare
Psest_1707 +0.9 3.2 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain compare
Psest_2555 +0.9 3.8 hypothetical protein compare
Psest_0529 +0.9 4.6 Putative Mg2+ and Co2+ transporter CorC compare
Psest_0831 +0.9 1.2 hypothetical protein compare
Psest_2557 +0.9 1.9 Protein of unknown function (DUF2474). compare
Psest_0487 +0.9 2.2 Uncharacterized protein conserved in bacteria compare
Psest_2950 +0.9 3.6 putative NAD(P)H quinone oxidoreductase, PIG3 family compare
Psest_1812 +0.9 4.4 pseudaminic acid CMP-transferase compare
Psest_0601 +0.9 1.3 hypothetical protein compare
Psest_0459 +0.9 5.2 Predicted carbamoyl transferase, NodU family compare
Psest_0192 +0.9 3.3 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_4310 +0.9 1.1 ABC-type Mn2+/Zn2+ transport systems, permease components compare
Psest_4209 +0.8 1.0 Uncharacterized conserved small protein compare
Psest_1910 +0.8 2.5 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase compare
Psest_4405 +0.8 2.0 hypothetical protein compare
Psest_2126 +0.8 2.4 Transcriptional regulators compare
Psest_1424 +0.8 2.4 Lipoate-protein ligase A compare
Psest_3974 +0.8 4.1 Anti-sigma regulatory factor (Ser/Thr protein kinase) compare
Psest_3988 +0.8 3.6 phosphoenolpyruvate carboxykinase (ATP) compare
Psest_1814 +0.8 6.1 pseudaminic acid biosynthesis N-acetyl transferase compare
Psest_4364 +0.8 1.9 16S rRNA (guanine(527)-N(7))-methyltransferase GidB compare
Psest_1816 +0.8 2.9 hypothetical protein compare
Psest_3550 +0.8 1.2 3,4-dihydroxy-2-butanone 4-phosphate synthase compare
Psest_0227 +0.8 2.0 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific compare
Psest_3112 +0.8 2.1 electron transport complex, RnfABCDGE type, A subunit compare
Psest_2470 +0.8 2.1 hypothetical protein compare
Psest_3114 +0.8 3.9 electron transport complex, RnfABCDGE type, C subunit compare
Psest_0857 +0.8 1.5 Membrane transporters of cations and cationic drugs compare
Psest_3519 +0.8 1.3 Uncharacterized conserved protein compare
Psest_2000 +0.8 2.9 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_4008 +0.8 5.4 PAS domain S-box compare
Psest_0060 +0.8 1.1 Predicted Fe-S protein compare
Psest_1963 +0.8 1.9 Peptidase inhibitor I78 family. compare
Psest_1522 +0.8 1.2 hypothetical protein compare
Psest_3902 +0.8 1.8 hypothetical protein compare
Psest_3937 +0.7 1.5 ATP-dependent protease HslVU, ATPase subunit compare
Psest_0170 +0.7 4.0 5,10-methenyltetrahydrofolate synthetase compare
Psest_1628 +0.7 1.8 hypothetical protein compare
Psest_0538 +0.7 7.0 Signal transduction histidine kinase compare
Psest_0722 +0.7 3.8 Predicted ATPase compare
Psest_3415 +0.7 5.7 hypothetical protein compare
Psest_3216 +0.7 6.6 diguanylate cyclase (GGDEF) domain compare
Psest_3984 +0.7 2.6 Methyl-accepting chemotaxis protein compare
Psest_3367 +0.7 1.2 translation initation factor SUI1, putative, prokaryotic compare
Psest_0149 +0.7 2.2 nitrate ABC transporter, permease protein compare
Psest_0693 +0.7 6.6 His Kinase A (phosphoacceptor) domain./PAS fold./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. compare
Psest_0450 +0.7 3.2 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) compare
Psest_4119 +0.7 2.6 hypothetical protein compare
Psest_3973 +0.7 1.2 Anti-sigma regulatory factor (Ser/Thr protein kinase) compare
Psest_2850 +0.7 0.7 Multisubunit Na+/H+ antiporter, MnhC subunit compare
Psest_4082 +0.7 1.8 hypothetical protein compare
Psest_2626 +0.7 2.4 Flp pilus assembly protein CpaB compare
Psest_1473 +0.7 2.3 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent compare
Psest_3192 +0.7 3.8 diguanylate cyclase (GGDEF) domain compare
Psest_0237 +0.7 1.0 intracellular protease, PfpI family compare
Psest_1897 +0.7 4.3 ABC-type sugar transport systems, permease components compare
Psest_1719 +0.7 2.5 flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) compare
Psest_2940 +0.7 1.6 Predicted membrane protein compare
Psest_0771 +0.7 4.1 Acyl-CoA hydrolase compare
Psest_1899 +0.7 2.9 ABC-type sugar transport systems, ATPase components compare
Psest_1909 +0.7 1.5 Phosphohistidine phosphatase SixA compare
Psest_4004 +0.7 3.2 Uncharacterized conserved protein compare
Psest_1551 +0.7 2.3 Integral membrane protein, interacts with FtsH compare
Psest_3545 +0.7 2.2 clan AA aspartic protease, TIGR02281 family compare
Psest_0395 +0.7 3.4 His Kinase A (phosphoacceptor) domain./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. compare
Psest_3355 +0.7 2.1 fructose-specific PTS system (fructose 1-phosphate forming), EI, Hpr, and EII-A components (from data) compare
Psest_1881 +0.7 1.6 Nitroreductase compare
Psest_2489 +0.7 3.0 branched-chain amino acid uptake carrier compare
Psest_1815 +0.7 3.8 pseudaminic acid synthase compare
Psest_0446 +0.7 3.5 hypothetical protein compare
Psest_2923 +0.6 1.4 hypothetical protein compare
Psest_1414 +0.6 2.7 Lactoylglutathione lyase and related lyases compare
Psest_4095 +0.6 1.1 Uncharacterized protein conserved in bacteria compare
Psest_1471 +0.6 2.3 Predicted membrane protein compare
Psest_1878 +0.6 1.6 Uncharacterized protein conserved in bacteria compare
Psest_3790 +0.6 3.6 Cytochrome c5 compare
Psest_2961 +0.6 1.9 Flagellar basal-body P-ring protein compare
Psest_1053 +0.6 1.1 hypothetical protein compare
Psest_4293 +0.6 3.7 PAS domain S-box/diguanylate cyclase (GGDEF) domain compare
Psest_2015 +0.6 1.6 Type II secretory pathway, component PulD compare
Psest_3230 +0.6 2.5 Uncharacterized conserved protein compare
Psest_3217 +0.6 5.8 PAS domain S-box compare
Psest_1740 +0.6 2.9 RNA polymerase sigma factor, FliA/WhiG family compare
Psest_1718 +0.6 2.2 flagellar hook-basal body complex protein FliE compare
Psest_1920 +0.6 0.6 Uncharacterized protein conserved in bacteria compare
Psest_2003 +0.6 4.2 Cytosine deaminase and related metal-dependent hydrolases compare
Psest_3882 +0.6 3.5 Opacity protein and related surface antigens compare
Psest_4196 +0.6 1.9 Type II secretory pathway, component PulK compare
Psest_0402 +0.6 1.8 glycosyltransferase, MGT family compare
Psest_2594 +0.6 1.1 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_2240 +0.6 1.2 hypothetical protein compare
Psest_1117 +0.6 1.6 Lipid A 3-O-deacylase (PagL). compare
Psest_3383 +0.6 1.8 Uncharacterized protein conserved in bacteria compare
Psest_1592 +0.6 1.5 hypothetical protein compare
Psest_1048 +0.6 2.7 Uncharacterized paraquat-inducible protein A compare
Psest_3072 +0.6 1.3 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit compare
Psest_1412 +0.6 2.4 Protein of unknown function (DUF3047). compare
Psest_0820 +0.6 1.7 hypothetical protein compare
Psest_3064 +0.6 1.3 hypothetical protein compare
Psest_0770 +0.6 1.9 alkylphosphonate utilization operon protein PhnA compare
Psest_0922 +0.6 1.3 alkylhydroperoxidase AhpD family core domain compare
Psest_2530 +0.6 2.2 cytochrome c oxidase, cbb3-type, subunit III compare
Psest_2248 +0.6 1.3 Predicted transcriptional regulators compare
Psest_3416 +0.6 3.4 Predicted ATPase (AAA+ superfamily) compare
Psest_1725 +0.6 3.8 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_4382 +0.6 4.3 hypothetical protein compare
Psest_2670 +0.6 1.5 Uncharacterized conserved protein compare
Psest_3854 +0.6 2.2 ABC-type branched-chain amino acid transport systems, ATPase component compare
Psest_0106 +0.6 1.9 malonate decarboxylase, gamma subunit compare
Psest_0207 +0.6 1.1 hypothetical protein compare
Psest_2646 +0.6 0.7 SOS regulatory protein LexA compare
Psest_2260 +0.6 4.6 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_2466 +0.6 2.1 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) compare
Psest_1635 +0.6 4.7 Signal transduction histidine kinase compare
Psest_2648 +0.6 1.2 hypothetical protein compare
Psest_1822 +0.6 2.7 Glycosyltransferases involved in cell wall biogenesis compare
Psest_0732 +0.6 1.8 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family compare
Psest_2343 +0.5 1.4 Mg-dependent DNase compare
Psest_4170 +0.5 0.4 Flagellar biosynthesis/type III secretory pathway protein compare
Psest_0759 +0.5 0.8 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT). compare
Psest_2439 +0.5 3.4 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) (from data) compare
Psest_2726 +0.5 1.0 Rhodanese-related sulfurtransferase compare
Psest_1598 +0.5 1.3 heavy metal response regulator compare
Psest_3789 +0.5 1.7 Uncharacterized protein containing double-stranded beta helix domain compare
Psest_2955 +0.5 1.1 Predicted transcriptional regulator with C-terminal CBS domains compare
Psest_1127 +0.5 2.3 hypothetical protein compare
Psest_0100 +0.5 1.8 phosphonate ABC transporter, ATP-binding protein compare
Psest_1794 +0.5 1.5 Flagellar motor protein compare
Psest_2020 +0.5 1.5 Uncharacterized protein involved in purine metabolism compare
Psest_0078 +0.5 0.6 hypothetical protein compare
Psest_3843 +0.5 2.4 4-hydroxybenzoate synthetase (chorismate lyase) compare
Psest_2427 +0.5 2.9 SH3 domain protein compare
Psest_1459 +0.5 1.4 hypothetical protein compare
Psest_1457 +0.5 1.1 FOG: Ankyrin repeat compare
Psest_1372 +0.5 1.8 Methyl-accepting chemotaxis protein compare
Psest_3042 +0.5 0.5 Nitrate reductase cytochrome c-type subunit compare
Psest_3497 +0.5 1.3 Predicted metalloprotease compare
Psest_1363 +0.5 2.2 Predicted membrane protein compare
Psest_4009 +0.5 1.1 conserverd hypothetical protein compare
Psest_1800 +0.5 2.0 anion transporter compare
Psest_1813 +0.5 2.7 pseudaminic acid biosynthesis-associated protein PseG compare
Psest_2860 +0.5 1.8 hypothetical protein compare
Psest_1597 +0.5 0.9 Protein of unknown function (DUF2933). compare
Psest_3456 +0.5 0.8 RNA polymerase sigma factor, sigma-70 family compare
Psest_2966 +0.5 2.8 Flagellar hook capping protein compare
Psest_2148 +0.5 1.2 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_3063 +0.5 1.9 hypothetical protein compare
Psest_0521 +0.5 3.0 lytic murein transglycosylase compare
Psest_3958 +0.5 1.5 Predicted Fe-S-cluster oxidoreductase compare


Specific Phenotypes

For 1 genes in this experiment

For stress Sodium Chloride in Pseudomonas stutzeri RCH2

For stress Sodium Chloride across organisms