Experiment set11H16 for Pseudomonas stutzeri RCH2

Compare to:

LB with Sodium perchlorate monohydrate 25 mM

200 most detrimental genes:

  gene name fitness t score description  
Psest_3113 +1.7 2.5 electron transport complex, RnfABCDGE type, B subunit compare
Psest_2764 +1.6 2.7 hypothetical protein compare
Psest_1417 +1.4 1.4 hypothetical protein compare
Psest_0575 +1.4 1.5 HrpA-like helicases compare
Psest_0367 +1.3 3.0 Predicted branched-chain amino acid permease (azaleucine resistance) compare
Psest_1994 +1.3 3.9 Amidases related to nicotinamidase compare
Psest_3395 +1.3 1.5 hypothetical protein compare
Psest_1230 +1.3 2.3 Uncharacterized protein conserved in bacteria compare
Psest_0115 +1.2 2.0 Predicted integral membrane protein compare
Psest_1710 +1.2 8.3 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs compare
Psest_1997 +1.2 1.5 6-phosphogluconolactonase compare
Psest_1540 +1.2 1.8 biotin-dependent carboxylase uncharacterized domain compare
Psest_2771 +1.2 1.8 Predicted membrane protein compare
Psest_1863 +1.1 2.4 hypothetical protein compare
Psest_0660 +1.1 3.7 Methyl-accepting chemotaxis protein compare
Psest_4051 +1.1 1.9 molybdenum-pterin binding domain compare
Psest_3659 +1.1 2.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_0831 +1.1 1.6 hypothetical protein compare
Psest_2855 +1.1 2.3 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Psest_2756 +1.0 1.6 hypothetical protein compare
Psest_0193 +1.0 0.9 conserved hypothetical protein compare
Psest_3474 +1.0 2.2 Short-chain dehydrogenases of various substrate specificities compare
Psest_3064 +1.0 2.2 hypothetical protein compare
Psest_1919 +1.0 1.7 Uncharacterized membrane protein (homolog of Drosophila rhomboid) compare
Psest_3170 +1.0 2.9 molybdenum cofactor biosynthesis protein MoaC compare
Psest_1704 +1.0 1.2 Dehydrogenases (flavoproteins) compare
Psest_4303 +1.0 2.3 HEAT repeat. compare
Psest_0675 +1.0 3.3 Predicted periplasmic lipoprotein compare
Psest_1860 +1.0 1.5 Uncharacterized conserved protein compare
Psest_4177 +1.0 1.7 flagellar biosynthetic protein FliP compare
Psest_2899 +0.9 1.6 hypothetical protein compare
Psest_2580 +0.9 4.0 Uncharacterized membrane protein, required for colicin V production compare
Psest_3014 +0.9 1.3 cob(I)alamin adenosyltransferase compare
Psest_2067 +0.9 1.2 ABC-type oligopeptide transport system, periplasmic component compare
Psest_3816 +0.9 0.7 DNA-directed RNA polymerase, omega subunit compare
Psest_3832 +0.9 2.2 hypothetical protein compare
Psest_2023 +0.9 2.4 isocitrate dehydrogenase, NADP-dependent, monomeric type compare
Psest_3400 +0.9 1.5 Copper resistance protein D. compare
Psest_3486 +0.9 6.8 respiratory nitrate reductase, alpha subunit compare
Psest_0401 +0.9 1.7 isopentenyl-diphosphate delta-isomerase, type 2 compare
Psest_4126 +0.9 2.3 Predicted peroxiredoxins compare
Psest_3237 +0.9 1.4 hypothetical protein compare
Psest_3230 +0.9 3.2 Uncharacterized conserved protein compare
Psest_0061 +0.8 2.1 hypothetical protein compare
Psest_1115 +0.8 2.7 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 compare
Psest_1184 +0.8 2.5 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol compare
Psest_1157 +0.8 3.0 Predicted periplasmic lipoprotein compare
Psest_2465 +0.8 3.7 hypothetical protein compare
Psest_3155 +0.8 2.5 hypothetical protein compare
Psest_1961 +0.8 4.2 molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial compare
Psest_3039 +0.8 1.3 periplasmic nitrate reductase, NapE protein compare
Psest_1700 +0.8 2.3 Transcriptional regulator compare
Psest_2744 +0.8 1.4 Uncharacterized conserved protein compare
Psest_1176 +0.8 1.9 Urea transporter compare
Psest_0592 +0.8 2.5 hypothetical protein compare
Psest_3922 +0.8 2.4 Response regulator of citrate/malate metabolism compare
Psest_3013 +0.8 1.3 cobyrinic acid a,c-diamide synthase compare
Psest_1354 +0.8 1.4 Uncharacterized protein conserved in bacteria compare
Psest_2066 +0.8 1.1 ABC-type uncharacterized transport system, permease component compare
Psest_3348 +0.8 2.9 Uncharacterized iron-regulated protein compare
Psest_0249 +0.8 2.7 UDP-N-acetylglucosamine 2-epimerase compare
Psest_1913 +0.7 2.2 Transcriptional regulator compare
Psest_1768 +0.7 2.8 thiopurine S-methyltransferase, Se/Te detoxification family compare
Psest_4170 +0.7 1.1 Flagellar biosynthesis/type III secretory pathway protein compare
Psest_3485 +0.7 4.7 nitrate reductase, beta subunit compare
Psest_1735 +0.7 3.0 flagellar biosynthetic protein FlhB compare
Psest_3754 +0.7 1.8 Uncharacterized protein involved in response to NO compare
Psest_4370 +0.7 1.2 Multisubunit Na+/H+ antiporter, MnhC subunit compare
Psest_3363 +0.7 2.1 hypothetical protein compare
Psest_3355 +0.7 2.4 fructose-specific PTS system (fructose 1-phosphate forming), EI, Hpr, and EII-A components (from data) compare
Psest_3521 +0.7 2.7 H+/gluconate symporter and related permeases compare
Psest_0959 +0.7 1.2 Uncharacterized protein conserved in bacteria compare
Psest_0837 +0.7 1.2 Putative lipid carrier protein compare
Psest_3001 +0.7 1.8 molybdenum ABC transporter, ATP-binding protein compare
Psest_0088 +0.7 2.1 phosphonate metabolism protein PhnP compare
Psest_1067 +0.7 1.7 hypothetical protein compare
Psest_1391 +0.7 2.0 ABC-type uncharacterized transport system, permease component compare
Psest_2975 +0.7 0.8 tRNA_Arg_CCT compare
Psest_2122 +0.7 0.8 Parvulin-like peptidyl-prolyl isomerase compare
Psest_0170 +0.7 2.7 5,10-methenyltetrahydrofolate synthetase compare
Psest_3415 +0.7 5.2 hypothetical protein compare
Psest_3995 +0.7 1.8 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_1879 +0.7 0.9 Trk-type K+ transport systems, membrane components compare
Psest_1974 +0.7 1.3 integration host factor, alpha subunit compare
Psest_2974 +0.7 2.8 Predicted glycosyltransferase compare
Psest_0414 +0.7 1.4 biotin biosynthesis protein BioC compare
Psest_3954 +0.7 2.0 Small protein A (tmRNA-binding) compare
Psest_3168 +0.6 1.1 Molybdopterin converting factor, large subunit compare
Psest_0747 +0.6 1.9 Putative GTPases (G3E family) compare
Psest_0415 +0.6 2.1 dethiobiotin synthase compare
Psest_2177 +0.6 1.9 Protein of unknown function (DUF1652). compare
Psest_1718 +0.6 2.4 flagellar hook-basal body complex protein FliE compare
Psest_1161 +0.6 1.0 E3 Ubiquitin ligase. compare
Psest_0277 +0.6 0.9 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family compare
Psest_2778 +0.6 1.2 Parvulin-like peptidyl-prolyl isomerase compare
Psest_2048 +0.6 1.6 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_1419 +0.6 2.1 Transcriptional regulator compare
Psest_2150 +0.6 1.1 DNA polymerase LigD, polymerase domain compare
Psest_1315 +0.6 1.2 hypothetical protein compare
Psest_3490 +0.6 1.4 Signal transduction histidine kinase, nitrate/nitrite-specific compare
Psest_1226 +0.6 1.6 hypothetical protein compare
Psest_0083 +0.6 0.9 Uncharacterized conserved protein compare
Psest_2923 +0.6 1.0 hypothetical protein compare
Psest_2681 +0.6 1.3 Uncharacterized protein conserved in bacteria compare
Psest_3697 +0.6 1.1 Outer membrane lipoprotein carrier protein LolA. compare
Psest_0266 +0.6 1.6 thiamine biosynthesis protein ThiS compare
Psest_1118 +0.6 1.0 Predicted Fe-S-cluster oxidoreductase compare
Psest_2239 +0.6 2.1 RES domain. compare
Psest_3069 +0.6 1.0 3-oxoadipate enol-lactonase compare
Psest_2165 +0.6 2.1 Cytochrome B561 compare
Psest_0100 +0.6 1.6 phosphonate ABC transporter, ATP-binding protein compare
Psest_1999 +0.6 0.5 pseudouridine synthase compare
Psest_1898 +0.6 3.1 ABC-type sugar transport system, permease component compare
Psest_3998 +0.6 2.5 glutamate--cysteine ligase compare
Psest_3331 +0.6 1.8 rare lipoprotein A compare
Psest_2248 +0.6 1.0 Predicted transcriptional regulators compare
Psest_0762 +0.6 2.8 Glucose/sorbosone dehydrogenases compare
Psest_3042 +0.6 0.6 Nitrate reductase cytochrome c-type subunit compare
Psest_3048 +0.6 1.3 hypothetical protein compare
Psest_2227 +0.6 2.1 hypothetical protein compare
Psest_0294 +0.6 1.7 Putative transcriptional regulator compare
Psest_4390 +0.6 2.0 hypothetical protein compare
Psest_1985 +0.6 1.5 histidinol-phosphate aminotransferase compare
Psest_2312 +0.6 3.1 Small-conductance mechanosensitive channel compare
Psest_4129 +0.6 3.1 Sulfate permease and related transporters (MFS superfamily) compare
Psest_0844 +0.6 1.8 High-affinity Fe2+/Pb2+ permease compare
Psest_4346 +0.6 2.1 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_3670 +0.5 3.2 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
Psest_0064 +0.5 1.3 Transcriptional regulator compare
Psest_4311 +0.5 2.1 Predicted metal-dependent hydrolase compare
Psest_1732 +0.5 1.3 flagellar biosynthetic protein FliP compare
Psest_2659 +0.5 2.2 Transcriptional regulator compare
Psest_0744 +0.5 0.5 Uncharacterized conserved protein compare
Psest_3546 +0.5 0.7 Phosphatidylglycerophosphatase A and related proteins compare
Psest_1734 +0.5 2.6 flagellar biosynthetic protein FliR compare
Psest_2798 +0.5 0.8 Truncated hemoglobins compare
Psest_0598 +0.5 3.0 Outer membrane protein compare
Psest_1117 +0.5 1.5 Lipid A 3-O-deacylase (PagL). compare
Psest_3979 +0.5 0.6 Fructose-2,6-bisphosphatase compare
Psest_3705 +0.5 2.5 hypothetical protein compare
Psest_4343 +0.5 0.7 Protein of unknown function (DUF3301). compare
Psest_1809 +0.5 2.9 Membrane protein involved in the export of O-antigen and teichoic acid compare
Psest_3050 +0.5 1.5 tRNA_Gly_CCC compare
Psest_0763 +0.5 1.6 Predicted membrane protein compare
Psest_3226 +0.5 0.6 Predicted membrane protein compare
Psest_3752 +0.5 1.5 hypothetical protein compare
Psest_2846 +0.5 1.2 monovalent cation/proton antiporter, MnhG/PhaG subunit compare
Psest_1121 +0.5 1.9 Hypoxanthine-guanine phosphoribosyltransferase compare
Psest_2894 +0.5 1.3 addiction module antidote protein, HigA family compare
Psest_3357 +0.5 1.1 Predicted pyrophosphatase compare
Psest_1173 +0.5 1.1 hypothetical protein compare
Psest_3974 +0.5 2.3 Anti-sigma regulatory factor (Ser/Thr protein kinase) compare
Psest_4009 +0.5 1.1 conserverd hypothetical protein compare
Psest_3753 +0.5 1.9 Acetyltransferases compare
Psest_1722 +0.5 2.8 flagellar protein export ATPase FliI compare
Psest_1951 +0.5 0.7 Uncharacterized protein conserved in bacteria compare
Psest_0640 +0.5 1.4 Uncharacterized conserved protein compare
Psest_0455 +0.5 2.5 ADP-heptose:LPS heptosyltransferase compare
Psest_3904 +0.5 0.8 hypothetical protein compare
Psest_1357 +0.5 1.3 Uncharacterized protein conserved in bacteria compare
Psest_0044 +0.5 2.1 Nuclease-related domain. compare
Psest_2420 +0.5 2.6 Transcriptional regulator compare
Psest_4108 +0.5 1.1 seryl-tRNA(sec) selenium transferase compare
Psest_3762 +0.5 1.1 iron donor protein CyaY compare
Psest_3543 +0.5 0.9 hypothetical protein compare
Psest_2711 +0.5 0.6 PilZ domain. compare
Psest_1370 +0.5 1.1 hypothetical protein compare
Psest_2442 +0.5 0.8 hypothetical protein compare
Psest_2912 +0.5 1.9 Uncharacterized conserved protein compare
Psest_1126 +0.5 1.8 Uncharacterized protein conserved in bacteria compare
Psest_2384 +0.5 1.1 Uncharacterized protein conserved in bacteria compare
Psest_0036 +0.5 2.5 Predicted membrane protein compare
Psest_4286 +0.5 3.0 Glutamine synthetase compare
Psest_2626 +0.5 1.5 Flp pilus assembly protein CpaB compare
Psest_4106 +0.5 1.3 formate dehydrogenase, gamma subunit compare
Psest_3479 +0.5 1.4 molybdenum cofactor synthesis domain compare
Psest_1843 +0.5 0.5 Uncharacterized Fe-S protein compare
Psest_2513 +0.5 1.8 Predicted membrane protein compare
Psest_4013 +0.5 1.9 TRAP transporter, DctM subunit compare
Psest_0048 +0.5 1.9 ABC-type multidrug transport system, ATPase and permease components compare
Psest_2662 +0.5 1.9 hypothetical protein compare
Psest_0403 +0.5 2.4 lycopene cyclase compare
Psest_2015 +0.5 1.1 Type II secretory pathway, component PulD compare
Psest_1787 +0.5 2.3 high affinity sulphate transporter 1 compare
Psest_3424 +0.5 2.0 Predicted membrane protein compare
Psest_2480 +0.5 1.2 Methyl-accepting chemotaxis protein compare
Psest_0877 +0.5 1.8 Restriction endonuclease compare
Psest_1783 +0.5 0.9 Predicted transporter component compare
Psest_3002 +0.5 0.7 Putative translation initiation inhibitor, yjgF family compare
Psest_2981 +0.5 0.5 sodium pump decarboxylases, gamma subunit compare
Psest_3484 +0.5 1.7 nitrate reductase molybdenum cofactor assembly chaperone compare
Psest_2475 +0.5 1.7 Acyl-CoA dehydrogenases compare
Psest_0435 +0.5 2.0 Predicted transcriptional regulators compare
Psest_0237 +0.5 0.7 intracellular protease, PfpI family compare
Psest_2163 +0.5 1.9 Transcriptional regulator compare
Psest_0079 +0.5 1.3 hypothetical protein compare
Psest_0482 +0.5 1.3 yqiA-like hydrolase, affects the cell envelope (from data) compare
Psest_3739 +0.5 1.5 Small-conductance mechanosensitive channel compare
Psest_2267 +0.5 2.6 PAS domain S-box compare
Psest_2424 +0.5 1.0 K+ transport systems, NAD-binding component compare


Specific Phenotypes

For 1 genes in this experiment

For stress Sodium perchlorate monohydrate in Pseudomonas stutzeri RCH2

For stress Sodium perchlorate monohydrate across organisms