Experiment set11H11 for Pseudomonas stutzeri RCH2
LB with Sodium nitrate 200 mM
Group: stressMedia: LB + Sodium nitrate (200 mM)
Culturing: psRCH2_ML7c, 48 well microplate; Tecan Infinite F200, Aerobic, at 30 (C), shaken=orbital
By: Kelly on 2/24/2014
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: 821 E3,E4
Specific Phenotypes
For 6 genes in this experiment
For stress Sodium nitrate in Pseudomonas stutzeri RCH2
For stress Sodium nitrate across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Central meta-cleavage pathway of aromatic compound degradation | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Purine metabolism
- Tryptophan metabolism
- Nucleotide sugars metabolism
- Lipopolysaccharide biosynthesis
- Folate biosynthesis
- Aminoacyl-tRNA biosynthesis
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis | 3 | 1 | 1 |
| superpathway of CDP-glucose-derived O-antigen building blocks biosynthesis | 8 | 1 | 1 |
| tRNA charging | 21 | 20 | 1 |