Experiment set10S97 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM L-Arginine

200 most important genes:

  gene name fitness t score description  
MMP_RS08715 -6.5 -2.1 formylmethanofuran dehydrogenase subunit B compare
MMP_RS04710 -6.3 -2.5 hypothetical protein compare
MMP_RS07845 -6.1 -2.9 LL-diaminopimelate aminotransferase compare
MMP_RS07345 -5.9 -10.5 glycine synthesis protein GlyXL (from data) compare
MMP_RS03315 -5.8 -1.6 ferrous iron transport protein A compare
MMP_RS04445 -5.6 -9.8 P-II family nitrogen regulator compare
MMP_RS06730 -5.6 -1.8 phosphopantothenate/pantothenate synthetase compare
MMP_RS01500 -5.5 -3.3 CBS domain-containing protein compare
MMP_RS04465 -5.4 -17.6 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS04455 -5.4 -23.7 nitrogenase subunit alpha compare
MMP_RS08720 -5.3 -1.7 4Fe-4S binding protein compare
MMP_RS04440 -5.3 -13.2 nitrogenase iron protein compare
MMP_RS04470 -5.3 -21.5 nitrogenase compare
MMP_RS08165 -5.2 -2.9 phosphoglycerate dehydrogenase compare
MMP_RS01830 -5.1 -1.7 tRNA-Val compare
MMP_RS04460 -5.1 -24.6 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS04450 -5.1 -16.4 P-II family nitrogen regulator compare
MMP_RS03035 -4.9 -5.1 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS01175 -4.9 -5.2 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS00555 -4.7 -8.8 MFS transporter compare
MMP_RS06475 -4.7 -6.4 FAD-dependent oxidoreductase compare
MMP_RS03450 -4.6 -3.2 glycine synthesis protein GlyXS (from data) compare
MMP_RS02685 -4.6 -16.3 molybdate ABC transporter substrate-binding protein compare
MMP_RS07185 -4.6 -14.5 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS05500 -4.6 -11.8 2-isopropylmalate synthase compare
MMP_RS01385 -4.5 -0.7 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS02145 -4.5 -13.4 winged helix-turn-helix transcriptional regulator compare
MMP_RS05930 -4.5 -3.2 3-isopropylmalate dehydratase large subunit compare
MMP_RS06400 -4.4 -2.4 4Fe-4S binding protein compare
MMP_RS04890 -4.4 -1.0 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS07390 -4.3 -3.7 cell division protein FtsZ compare
MMP_RS01020 -4.3 -1.4 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS02680 -4.3 -9.1 ABC transporter permease compare
MMP_RS07635 -4.3 -11.8 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS01455 -4.3 -7.6 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS02010 -4.3 -12.2 PHP domain-containing protein compare
MMP_RS03025 -4.3 -8.9 molybdenum cofactor guanylyltransferase compare
MMP_RS00040 -4.3 -7.3 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS02670 -4.2 -15.0 ATP-binding cassette domain-containing protein compare
MMP_RS08650 -4.2 -5.3 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS02675 -4.2 -4.4 hypothetical protein compare
MMP_RS00455 -4.1 -8.1 orotate phosphoribosyltransferase-like protein compare
MMP_RS07380 -4.0 -2.7 transcription elongation factor Spt5 compare
MMP_RS03700 -4.0 -12.5 sodium:proton antiporter compare
MMP_RS07730 -4.0 -2.7 pyruvate synthase subunit beta compare
MMP_RS04215 -4.0 -13.1 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS02730 -3.9 -12.5 ModD protein compare
MMP_RS06285 -3.9 -2.9 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS07525 -3.9 -9.1 4Fe-4S binding protein compare
MMP_RS09020 -3.8 -2.1 hypothetical protein compare
MMP_RS06375 -3.8 -6.5 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS01800 -3.8 -5.1 TIGR00303 family protein compare
MMP_RS06315 -3.8 -0.9 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS05265 -3.8 -2.9 2-isopropylmalate synthase compare
MMP_RS00300 -3.8 -0.8 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS06270 -3.7 -5.8 TIGR00300 family protein compare
MMP_RS07445 -3.6 -6.5 helix-turn-helix domain-containing protein compare
MMP_RS03580 -3.6 -5.5 signal recognition particle-docking protein FtsY compare
MMP_RS08860 -3.5 -8.1 MinD/ParA family protein compare
MMP_RS00750 -3.5 -3.5 fumarate hydratase compare
MMP_RS03960 -3.4 -2.1 hypothetical protein compare
MMP_RS07365 -3.4 -15.6 2-phosphoglycerate kinase compare
MMP_RS03110 -3.4 -9.2 glycosyltransferase family 2 protein compare
MMP_RS08790 -3.3 -2.5 translation initiation factor IF-2 subunit alpha compare
MMP_RS06630 -3.3 -1.1 UPF0058 family protein compare
MMP_RS00685 -3.3 -5.2 2-phospho-L-lactate guanylyltransferase compare
MMP_RS06020 -3.3 -5.6 archaeoflavoprotein AfpA compare
MMP_RS07355 -3.3 -1.1 transcription factor S compare
MMP_RS01610 -3.3 -3.5 hypothetical protein compare
MMP_RS04585 -3.3 -12.7 AIR synthase related protein compare
MMP_RS06120 -3.3 -2.9 UPF0147 family protein compare
MMP_RS02355 -3.2 -3.9 30S ribosomal protein S27ae compare
MMP_RS06855 -3.1 -13.2 hypothetical protein compare
MMP_RS06295 -3.1 -8.1 methanogenesis marker 14 protein compare
MMP_RS02245 -3.1 -4.1 hypothetical protein compare
MMP_RS01225 -3.1 -6.0 DUF5379 domain-containing protein compare
MMP_RS07075 -3.1 -5.2 phosphomannomutase/phosphoglucomutase compare
MMP_RS08785 -3.1 -1.5 RNA-protein complex protein Nop10 compare
MMP_RS01325 -3.1 -2.8 dihydroneopterin aldolase family protein compare
MMP_RS03435 -3.1 -2.6 ketol-acid reductoisomerase compare
MMP_RS06725 -3.1 -12.6 hypothetical protein compare
MMP_RS06625 -3.0 -3.0 DNA primase compare
MMP_RS03600 -3.0 -2.3 triose-phosphate isomerase compare
MMP_RS04790 -3.0 -14.6 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS05430 -3.0 -5.8 TIGR00288 family NYN domain-containing protein compare
MMP_RS01220 -3.0 -8.6 hypothetical protein compare
MMP_RS02195 -2.9 -4.7 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS00810 -2.9 -8.8 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS08210 -2.9 -3.1 phosphatidylglycerophosphatase A compare
MMP_RS08500 -2.9 -8.5 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS02800 -2.9 -8.8 nucleotidyltransferase domain-containing protein compare
MMP_RS08645 -2.8 -10.9 UPF0179 family protein compare
MMP_RS00310 -2.8 -7.8 CBS domain-containing protein compare
MMP_RS01005 -2.8 -1.7 riboflavin synthase compare
MMP_RS00735 -2.8 -4.6 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS06895 -2.8 -2.5 selenocysteine-specific translation elongation factor compare
MMP_RS07600 -2.7 -3.4 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS03640 -2.7 -4.2 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS04780 -2.7 -4.1 ribonuclease P compare
MMP_RS07200 -2.7 -7.7 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS00915 -2.7 -7.6 DUF116 domain-containing protein compare
MMP_RS07605 -2.7 -4.2 diadenylate cyclase compare
MMP_RS06975 -2.7 -2.7 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS01875 -2.7 -12.4 N-acetyltransferase compare
MMP_RS01380 -2.7 -6.0 PHP domain-containing protein compare
MMP_RS04090 -2.7 -4.0 hypothetical protein compare
MMP_RS02240 -2.7 -3.6 methanogenesis marker 7 protein compare
MMP_RS05250 -2.7 -2.0 NFYB/HAP3 family transcription factor subunit compare
MMP_RS08195 -2.7 -13.0 hypothetical protein compare
MMP_RS06940 -2.6 -5.6 polyprenyl diphosphate synthase compare
MMP_RS01885 -2.6 -9.5 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS04870 -2.6 -6.1 TIGR02253 family HAD-type hydrolase compare
MMP_RS08435 -2.6 -2.2 Era-like GTP-binding protein compare
MMP_RS06670 -2.6 -6.8 glucose-6-phosphate isomerase compare
MMP_RS01890 -2.6 -5.8 nucleotide sugar dehydrogenase compare
MMP_RS01795 -2.6 -1.9 methanogenesis marker 6 protein compare
MMP_RS04685 -2.5 -4.0 DUF126 domain-containing protein compare
MMP_RS04900 -2.5 -16.2 hypothetical protein compare
MMP_RS07695 -2.5 -7.7 DUF3236 domain-containing protein compare
MMP_RS07435 -2.5 -2.0 GMP synthase subunit A compare
MMP_RS07955 -2.5 -6.6 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS08440 -2.4 -2.6 cell division protein SepF compare
MMP_RS01700 -2.4 -0.9 dihydroxy-acid dehydratase compare
MMP_RS02345 -2.4 -4.2 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS02175 -2.3 -1.1 DUF1611 domain-containing protein compare
MMP_RS04850 -2.3 -16.6 UPF0254 family protein compare
MMP_RS00115 -2.3 -12.7 radical SAM protein compare
MMP_RS01725 -2.3 -4.3 class I SAM-dependent methyltransferase family protein compare
MMP_RS05925 -2.3 -4.2 small nuclear ribonucleoprotein compare
MMP_RS06925 -2.3 -3.2 ribonuclease VapC4 compare
MMP_RS00985 -2.3 -5.3 CDC48 family AAA ATPase compare
MMP_RS00515 -2.3 -1.0 DUF655 domain-containing protein compare
MMP_RS08155 -2.3 -8.9 hypothetical protein compare
MMP_RS01265 -2.3 -2.8 hypothetical protein compare
MMP_RS01755 -2.2 -1.1 DUF2097 domain-containing protein compare
MMP_RS07555 -2.2 -1.1 monovalent cation/H+ antiporter subunit E compare
MMP_RS01880 -2.2 -7.4 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS08460 -2.2 -3.0 proteasome-activating nucleotidase compare
MMP_RS00730 -2.2 -5.3 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS02190 -2.2 -3.0 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS06355 -2.2 -2.3 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS07535 -2.1 -10.2 4Fe-4S binding protein compare
MMP_RS02340 -2.1 -1.9 DNA-directed RNA polymerase subunit E'' compare
MMP_RS08330 -2.1 -6.1 NADH-quinone oxidoreductase subunit H compare
MMP_RS01925 -2.1 -8.2 DUF1616 domain-containing protein compare
MMP_RS07710 -2.1 -7.8 cell division protein FtsZ compare
MMP_RS05640 -2.1 -7.0 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS05920 -2.0 -0.6 50S ribosomal protein L37e compare
MMP_RS07700 -2.0 -11.3 DUF1188 domain-containing protein compare
MMP_RS05425 -2.0 -5.7 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS00725 -2.0 -7.2 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS05020 -2.0 -3.5 hypothetical protein compare
MMP_RS06230 -2.0 -3.2 helix-turn-helix domain-containing protein compare
MMP_RS06175 -2.0 -5.6 winged helix-turn-helix transcriptional regulator compare
MMP_RS01900 -2.0 -11.3 hypothetical protein compare
MMP_RS02135 -2.0 -4.4 DUF5612 domain-containing protein compare
MMP_RS06350 -2.0 -5.6 HesA/MoeB/ThiF family protein compare
MMP_RS08745 -2.0 -6.5 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS07090 -2.0 -6.6 tRNA (adenine-N1)-methyltransferase compare
MMP_RS08705 -2.0 -5.7 sulfopyruvate decarboxylase subunit beta compare
MMP_RS03090 -2.0 -6.7 cation:proton antiporter compare
MMP_RS03445 -2.0 -1.1 methanogenesis marker 17 protein compare
MMP_RS04955 -2.0 -5.8 DNA topoisomerase I compare
MMP_RS06395 -2.0 -3.1 ThiF family adenylyltransferase compare
MMP_RS01445 -1.9 -7.0 hypothetical protein compare
MMP_RS06340 -1.9 -7.3 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS00900 -1.9 -2.4 50S ribosomal protein L39e compare
MMP_RS05550 -1.9 -0.8 cation:proton antiporter compare
MMP_RS05515 -1.9 -6.0 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS05540 -1.9 -2.2 hypothetical protein compare
MMP_RS08820 -1.9 -5.8 hypothetical protein compare
MMP_RS02780 -1.9 -5.7 hypothetical protein compare
MMP_RS09055 -1.9 -1.0 CAP domain-containing protein compare
MMP_RS07750 -1.8 -5.0 DUF357 domain-containing protein compare
MMP_RS05345 -1.8 -6.8 hypothetical protein compare
MMP_RS08570 -1.8 -8.1 coenzyme F420-0:L-glutamate ligase compare
MMP_RS01665 -1.8 -3.0 DUF2111 domain-containing protein compare
MMP_RS03420 -1.8 -1.9 acetolactate synthase small subunit compare
MMP_RS06105 -1.8 -6.9 hydrogenase maturation peptidase HycI compare
MMP_RS08635 -1.8 -1.8 UbiA family prenyltransferase compare
MMP_RS06885 -1.7 -2.7 50S ribosome-binding GTPase compare
MMP_RS07575 -1.7 -3.7 RNA ligase partner protein compare
MMP_RS00695 -1.7 -0.8 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS05280 -1.7 -6.3 COG1361 S-layer family protein compare
MMP_RS08855 -1.7 -5.9 hypothetical protein compare
MMP_RS06840 -1.7 -1.0 DNA-directed RNA polymerase subunit N compare
MMP_RS00320 -1.7 -1.9 class I SAM-dependent methyltransferase compare
MMP_RS08660 -1.7 -7.2 DHH family phosphoesterase compare
MMP_RS05815 -1.7 -2.6 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS07530 -1.7 -7.5 4Fe-4S binding protein compare
MMP_RS00035 -1.6 -4.6 DUF2098 family protein compare
MMP_RS07685 -1.6 -6.2 TIGR01212 family radical SAM protein compare
MMP_RS06110 -1.6 -3.3 ATP-dependent protease LonB compare
MMP_RS07545 -1.6 -1.2 HTH domain-containing protein compare
MMP_RS02930 -1.6 -3.0 class I SAM-dependent methyltransferase compare
MMP_RS04500 -1.6 -11.2 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS01180 -1.6 -1.1 XTP/dITP diphosphatase compare
MMP_RS00315 -1.6 -6.4 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS07415 -1.6 -3.4 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMP_RS02165 -1.5 -6.9 tRNA-dihydrouridine synthase compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nitrogen source experiments

For nitrogen source L-Arginine across organisms