Experiment set10S431 for Enterobacter sp. TBS_079

Compare to:

D-Tagatose nitrogen source

200 most important genes:

  gene name fitness t score description  
MPMX20_03479 -5.7 -2.4 30S ribosomal protein S16 compare
MPMX20_00136 -5.0 -1.2 hypothetical protein compare
MPMX20_01286 -4.6 -1.9 Sec-independent protein translocase protein TatE compare
MPMX20_01958 -4.0 -1.0 Fumarase D compare
MPMX20_03509 -3.9 -1.3 hypothetical protein compare
MPMX20_02496 -3.7 -1.3 Lipopolysaccharide assembly protein A compare
MPMX20_03334 -3.4 -1.1 hypothetical protein compare
MPMX20_04601 -3.1 -2.0 DNA polymerase I compare
MPMX20_00831 -3.0 -4.7 RNA polymerase-binding transcription factor DksA compare
MPMX20_01355 -2.9 -1.0 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_01005 -2.8 -3.8 Transcriptional repressor NrdR compare
MPMX20_04301 -2.8 -3.0 Fe/S biogenesis protein NfuA compare
MPMX20_04595 -2.6 -1.7 Glutamine synthetase compare
MPMX20_02116 -2.6 -2.3 hypothetical protein compare
MPMX20_04162 -2.5 -4.2 3-dehydroquinate dehydratase compare
MPMX20_03309 -2.5 -2.3 Phosphocarrier protein HPr compare
MPMX20_00086 -2.5 -2.7 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_02755 -2.4 -3.9 KHG/KDPG aldolase compare
MPMX20_03653 -2.3 -8.4 GTP pyrophosphokinase compare
MPMX20_02309 -2.2 -5.2 hypothetical protein compare
MPMX20_01362 -2.2 -4.2 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_01566 -2.2 -6.8 Phosphoserine aminotransferase compare
MPMX20_03683 -2.2 -3.3 RecBCD enzyme subunit RecB compare
MPMX20_03771 -2.1 -5.8 D-3-phosphoglycerate dehydrogenase compare
MPMX20_03705 -2.1 -4.8 Diaminopimelate decarboxylase compare
MPMX20_01548 -2.1 -3.4 putative ABC transporter ATP-binding/permease protein compare
MPMX20_04040 -2.1 -2.4 PTS system fructose-specific EIIB component compare
MPMX20_04066 -2.1 -1.6 ATP-dependent RNA helicase DeaD compare
MPMX20_03753 -2.0 -4.6 Tyrosine recombinase XerD compare
MPMX20_00030 -2.0 -0.9 hypothetical protein compare
MPMX20_00395 -2.0 -2.7 hypothetical protein compare
MPMX20_01989 -1.9 -1.8 hypothetical protein compare
MPMX20_00739 -1.9 -4.4 Carbamoyl-phosphate synthase small chain compare
MPMX20_01741 -1.9 -3.6 Dihydroorotase compare
MPMX20_04028 -1.9 -1.4 hypothetical protein compare
MPMX20_04319 -1.8 -4.1 HTH-type transcriptional regulator GntR compare
MPMX20_01950 -1.8 -2.8 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_03498 -1.8 -1.6 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_03852 -1.8 -6.3 Cystathionine beta-lyase MetC compare
MPMX20_03706 -1.8 -4.5 Octopine catabolism/uptake operon regulatory protein OccR compare
MPMX20_03408 -1.8 -1.7 Co-chaperone protein HscB compare
MPMX20_04194 -1.7 -1.2 Peptide deformylase compare
MPMX20_04276 -1.7 -3.7 DNA adenine methylase compare
MPMX20_03685 -1.7 -4.3 RecBCD enzyme subunit RecC compare
MPMX20_00998 -1.7 -2.0 Sec translocon accessory complex subunit YajC compare
MPMX20_02295 -1.7 -1.3 hypothetical protein compare
MPMX20_04626 -1.7 -2.9 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_03966 -1.7 -2.2 hypothetical protein compare
MPMX20_03580 -1.6 -3.5 Protein RecA compare
MPMX20_00775 -1.6 -2.3 Ribosomal RNA small subunit methyltransferase H compare
MPMX20_00740 -1.6 -4.7 Carbamoyl-phosphate synthase large chain compare
MPMX20_04596 -1.6 -5.0 Sensory histidine kinase/phosphatase NtrB compare
MPMX20_03774 -1.6 -2.8 26 kDa periplasmic immunogenic protein compare
MPMX20_02693 -1.6 -1.5 hypothetical protein compare
MPMX20_04189 -1.6 -2.8 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_01367 -1.6 -3.3 Tol-Pal system protein TolR compare
MPMX20_01765 -1.6 -2.4 Ribonuclease E compare
MPMX20_00927 -1.5 -5.1 Glutamate 5-kinase compare
MPMX20_04670 -1.5 -1.5 hypothetical protein compare
MPMX20_00693 -1.5 -3.2 Phosphoserine phosphatase compare
MPMX20_04641 -1.5 -2.0 Phosphate transport system permease protein PstA compare
MPMX20_01835 -1.5 -2.1 HTH-type transcriptional regulator NimR compare
MPMX20_03010 -1.5 -4.2 UDP-glucose 4-epimerase compare
MPMX20_04549 -1.5 -3.9 hypothetical protein compare
MPMX20_02953 -1.4 -1.5 hypothetical protein compare
MPMX20_00826 -1.4 -2.2 Pantothenate synthetase compare
MPMX20_00874 -1.4 -1.6 hypothetical protein compare
MPMX20_00767 -1.4 -3.4 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_02591 -1.4 -2.6 DNA-binding protein H-NS compare
MPMX20_01366 -1.4 -2.8 Tol-Pal system protein TolQ compare
MPMX20_00193 -1.4 -3.5 Dipeptide transport ATP-binding protein DppD compare
MPMX20_04597 -1.4 -3.2 DNA-binding transcriptional regulator NtrC compare
MPMX20_00766 -1.4 -2.3 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_02993 -1.4 -2.9 hypothetical protein compare
MPMX20_01030 -1.4 -3.8 Lon protease compare
MPMX20_03468 -1.4 -3.0 T-protein compare
MPMX20_04521 -1.4 -3.3 Acetylglutamate kinase compare
MPMX20_04531 -1.4 -3.9 Cystathionine gamma-synthase compare
MPMX20_02279 -1.4 -1.7 hypothetical protein compare
MPMX20_02106 -1.3 -2.7 hypothetical protein compare
MPMX20_04077 -1.3 -3.7 Argininosuccinate synthase compare
MPMX20_04275 -1.3 -1.8 Ribulose-phosphate 3-epimerase compare
MPMX20_03002 -1.3 -5.4 Histidinol dehydrogenase compare
MPMX20_01382 -1.3 -2.0 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_00176 -1.3 -2.5 Cold shock protein CspA compare
MPMX20_02576 -1.3 -1.8 Protein TonB compare
MPMX20_03234 -1.3 -1.9 putative Nudix hydrolase YfcD compare
MPMX20_00622 -1.3 -3.3 hypothetical protein compare
MPMX20_00556 -1.3 -3.7 Ornithine carbamoyltransferase subunit F compare
MPMX20_02164 -1.3 -2.4 HTH-type transcriptional regulator ZntR compare
MPMX20_03323 -1.3 -1.7 Oxygen-dependent coproporphyrinogen-III oxidase compare
MPMX20_00102 -1.3 -1.9 hypothetical protein compare
MPMX20_04127 -1.3 -4.7 Glutamate synthase [NADPH] small chain compare
MPMX20_01056 -1.3 -1.5 50S ribosomal protein L31 type B compare
MPMX20_03005 -1.3 -3.2 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_01552 -1.3 -2.9 hypothetical protein compare
MPMX20_03090 -1.3 -0.8 Methionine--tRNA ligase compare
MPMX20_02997 -1.3 -3.7 Exodeoxyribonuclease I compare
MPMX20_04126 -1.3 -6.1 Glutamate synthase [NADPH] large chain compare
MPMX20_01615 -1.2 -2.1 putative protein YccU compare
MPMX20_04079 -1.2 -1.2 Protein-export membrane protein SecG compare
MPMX20_02157 -1.2 -2.0 hypothetical protein compare
MPMX20_02050 -1.2 -2.5 hypothetical protein compare
MPMX20_01493 -1.2 -2.0 Ribosomal protein S6--L-glutamate ligase compare
MPMX20_01349 -1.2 -2.6 Citrate synthase compare
MPMX20_02574 -1.2 -1.6 putative intracellular septation protein A compare
MPMX20_03006 -1.2 -3.4 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_01818 -1.2 -2.3 Phosphatase NudJ compare
MPMX20_03003 -1.2 -3.8 Histidinol-phosphate aminotransferase compare
MPMX20_03850 -1.2 -1.4 Biopolymer transport protein ExbD compare
MPMX20_00801 -1.2 -1.2 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
MPMX20_02476 -1.2 -1.4 Putrescine export system permease protein SapC compare
MPMX20_00768 -1.2 -4.1 3-isopropylmalate dehydrogenase compare
MPMX20_04170 -1.1 -1.2 DNA-binding protein Fis compare
MPMX20_04650 -1.1 -1.8 tRNA modification GTPase MnmE compare
MPMX20_01969 -1.1 -2.2 Carbonic anhydrase 1 compare
MPMX20_01657 -1.1 -2.6 5-hydroxyisourate hydrolase compare
MPMX20_04529 -1.1 -2.2 5,10-methylenetetrahydrofolate reductase compare
MPMX20_00807 -1.1 -2.3 Pyruvate dehydrogenase E1 component compare
MPMX20_04119 -1.1 -1.3 DNA polymerase III subunit chi compare
MPMX20_00093 -1.1 -3.3 Orotate phosphoribosyltransferase compare
MPMX20_02718 -1.1 -2.7 putative Nudix hydrolase NudL compare
MPMX20_01917 -1.1 -2.6 Hemin transport protein HemS compare
MPMX20_01466 -1.1 -2.2 Molybdopterin-synthase adenylyltransferase compare
MPMX20_04505 -1.1 -2.9 HTH-type transcriptional regulator HdfR compare
MPMX20_04278 -1.1 -2.4 3-dehydroquinate synthase compare
MPMX20_01379 -1.1 -1.9 Zinc transporter ZitB compare
MPMX20_03688 -1.1 -2.8 hypothetical protein compare
MPMX20_02716 -1.1 -1.5 hypothetical protein compare
MPMX20_01029 -1.1 -2.4 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_01478 -1.1 -2.1 Deoxyribose operon repressor compare
MPMX20_00545 -1.1 -1.9 Arginine repressor compare
MPMX20_00070 -1.1 -3.5 hypothetical protein compare
MPMX20_02514 -1.1 -2.0 Tryptophan synthase alpha chain compare
MPMX20_03356 -1.1 -4.7 Polyphosphate kinase compare
MPMX20_00032 -1.1 -1.5 Acetolactate synthase isozyme 1 small subunit compare
MPMX20_00747 -1.1 -2.3 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_03407 -1.1 -1.6 Chaperone protein HscA compare
MPMX20_02770 -1.1 -2.4 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_00711 -1.1 -3.3 Homoserine kinase compare
MPMX20_02134 -1.1 -2.7 hypothetical protein compare
MPMX20_01942 -1.1 -3.4 HTH-type transcriptional repressor BluR compare
MPMX20_04523 -1.1 -3.4 Acetylornithine deacetylase compare
MPMX20_01236 -1.1 -3.2 hypothetical protein compare
MPMX20_00519 -1.1 -2.7 hypothetical protein compare
MPMX20_00074 -1.0 -3.2 Outer membrane lipoprotein Blc compare
MPMX20_04499 -1.0 -3.4 Dihydroxy-acid dehydratase compare
MPMX20_04406 -1.0 -2.5 HTH-type transcriptional regulator PgrR compare
MPMX20_02204 -1.0 -2.7 hypothetical protein compare
MPMX20_01648 -1.0 -1.1 hypothetical protein compare
MPMX20_02511 -1.0 -3.7 Bifunctional protein TrpGD compare
MPMX20_04566 -1.0 -1.7 L-rhamnose mutarotase compare
MPMX20_01098 -1.0 -1.8 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_04642 -1.0 -1.1 Phosphate import ATP-binding protein PstB compare
MPMX20_02163 -1.0 -2.9 putative oxidoreductase compare
MPMX20_03466 -1.0 -3.8 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_00728 -1.0 -0.6 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_01596 -1.0 -6.5 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_03681 -1.0 -4.5 Amino-acid acetyltransferase compare
MPMX20_00031 -1.0 -3.8 Acetolactate synthase isozyme 1 large subunit compare
MPMX20_03447 -1.0 -2.5 ATP-dependent RNA helicase SrmB compare
MPMX20_02757 -1.0 -1.5 Glucose-6-phosphate 1-dehydrogenase compare
MPMX20_01697 -1.0 -1.8 Putative aminoacrylate peracid reductase RutC compare
MPMX20_00494 -1.0 -1.0 hypothetical protein compare
MPMX20_02696 -1.0 -2.6 Murein tetrapeptide carboxypeptidase compare
MPMX20_03008 -1.0 -2.5 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_01545 -1.0 -1.0 hypothetical protein compare
MPMX20_00592 -1.0 -1.3 hypothetical protein compare
MPMX20_00087 -1.0 -1.3 DNA-directed RNA polymerase subunit omega compare
MPMX20_01551 -1.0 -2.0 Leucine-responsive regulatory protein compare
MPMX20_03014 -1.0 -4.5 6-phosphogluconate dehydrogenase, decarboxylating compare
MPMX20_00928 -1.0 -3.8 Gamma-glutamyl phosphate reductase compare
MPMX20_01361 -1.0 -2.4 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_04307 -1.0 -2.5 Rhomboid protease GlpG compare
MPMX20_02758 -1.0 -1.9 HTH-type transcriptional regulator HexR compare
MPMX20_02194 -1.0 -2.6 Protein YdcF compare
MPMX20_03963 -1.0 -1.6 hypothetical protein compare
MPMX20_04520 -1.0 -3.2 Argininosuccinate lyase compare
MPMX20_04197 -1.0 -3.0 Trk system potassium uptake protein TrkA compare
MPMX20_01919 -1.0 -1.3 putative protein YdiE compare
MPMX20_04322 -1.0 -2.2 L-amino acid N-acetyltransferase AaaT compare
MPMX20_04552 -0.9 -2.0 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_02812 -0.9 -1.0 hypothetical protein compare
MPMX20_01028 -0.9 -1.2 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_03004 -0.9 -3.1 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_01263 -0.9 -3.2 Methylthioribose kinase compare
MPMX20_03318 -0.9 -2.4 Dye-decolorizing peroxidase YfeX compare
MPMX20_03902 -0.9 -0.6 Urease accessory protein UreE compare
MPMX20_00602 -0.9 -2.3 Glycerol-3-phosphate regulon repressor compare
MPMX20_02513 -0.9 -2.9 Tryptophan synthase beta chain compare
MPMX20_02629 -0.9 -1.9 Glutathione-specific gamma-glutamylcyclotransferase compare
MPMX20_00721 -0.9 -1.2 Chaperone protein DnaJ compare
MPMX20_02787 -0.9 -2.2 Protein-glutamate methylesterase/protein-glutamine glutaminase compare
MPMX20_03626 -0.9 -2.0 hypothetical protein compare
MPMX20_03387 -0.9 -2.2 hypothetical protein compare
MPMX20_01043 -0.9 -3.4 Ammonia channel compare
MPMX20_03390 -0.9 -2.3 Outer membrane protein assembly factor BamB compare
MPMX20_01739 -0.9 -4.3 Biofilm regulator BssS compare
MPMX20_04573 -0.9 -1.6 hypothetical protein compare
MPMX20_03433 -0.9 -1.4 Ferredoxin YfhL compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in nitrogen source experiments

For nitrogen source D-(-)-tagatose across organisms