Experiment set10S427 for Enterobacter sp. TBS_079

Compare to:

Beta-Lactose nitrogen source

200 most important genes:

  gene name fitness t score description  
MPMX20_03571 -5.8 -1.5 tRNA-Arg compare
MPMX20_01648 -5.1 -1.8 hypothetical protein compare
MPMX20_01355 -4.8 -1.2 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_03386 -4.1 -1.0 putative protein YfgJ compare
MPMX20_00388 -4.0 -1.0 hypothetical protein compare
MPMX20_02766 -4.0 -2.8 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_03409 -3.9 -2.6 Iron-binding protein IscA compare
MPMX20_03090 -3.8 -1.3 Methionine--tRNA ligase compare
MPMX20_00764 -3.6 -1.5 hypothetical protein compare
MPMX20_01549 -3.5 -4.1 ATP-binding/permease protein CydD compare
MPMX20_00428 -3.5 -4.1 hypothetical protein compare
MPMX20_01446 -3.3 -2.6 Small protein MntS compare
MPMX20_02646 -2.9 -2.0 hypothetical protein compare
MPMX20_04595 -2.8 -1.8 Glutamine synthetase compare
MPMX20_00441 -2.7 -0.9 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_04504 -2.7 -3.0 hypothetical protein compare
MPMX20_04601 -2.7 -2.3 DNA polymerase I compare
MPMX20_01030 -2.6 -6.7 Lon protease compare
MPMX20_00899 -2.5 -1.4 Ribonuclease HI compare
MPMX20_03771 -2.5 -6.7 D-3-phosphoglycerate dehydrogenase compare
MPMX20_00807 -2.3 -1.6 Pyruvate dehydrogenase E1 component compare
MPMX20_04440 -2.3 -1.6 Transcription antitermination protein RfaH compare
MPMX20_04029 -2.3 -2.0 Cyclic dipyrimidine nucleotide synthase compare
MPMX20_04427 -2.3 -0.8 5S ribosomal RNA compare
MPMX20_00745 -2.2 -3.6 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_01028 -2.2 -2.7 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_02767 -2.2 -3.0 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_01370 -2.2 -2.5 Peptidoglycan-associated lipoprotein compare
MPMX20_03408 -2.2 -2.1 Co-chaperone protein HscB compare
MPMX20_04597 -2.1 -4.3 DNA-binding transcriptional regulator NtrC compare
MPMX20_01389 -2.0 -2.4 Multidrug efflux pump accessory protein AcrZ compare
MPMX20_01548 -2.0 -3.2 putative ABC transporter ATP-binding/permease protein compare
MPMX20_03814 -2.0 -1.6 hypothetical protein compare
MPMX20_03811 -2.0 -2.0 hypothetical protein compare
MPMX20_04628 -2.0 -1.6 ATP synthase protein I compare
MPMX20_01362 -2.0 -4.3 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_03356 -1.9 -6.7 Polyphosphate kinase compare
MPMX20_04275 -1.9 -2.5 Ribulose-phosphate 3-epimerase compare
MPMX20_00928 -1.9 -5.8 Gamma-glutamyl phosphate reductase compare
MPMX20_04278 -1.9 -4.2 3-dehydroquinate synthase compare
MPMX20_04642 -1.9 -2.0 Phosphate import ATP-binding protein PstB compare
MPMX20_01950 -1.9 -2.3 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_00102 -1.8 -3.2 hypothetical protein compare
MPMX20_01566 -1.8 -7.0 Phosphoserine aminotransferase compare
MPMX20_01029 -1.8 -3.8 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_02576 -1.8 -2.8 Protein TonB compare
MPMX20_04052 -1.8 -2.5 hypothetical protein compare
MPMX20_03653 -1.7 -5.4 GTP pyrophosphokinase compare
MPMX20_02513 -1.7 -4.9 Tryptophan synthase beta chain compare
MPMX20_00831 -1.7 -3.3 RNA polymerase-binding transcription factor DksA compare
MPMX20_04626 -1.7 -3.5 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_04641 -1.7 -2.3 Phosphate transport system permease protein PstA compare
MPMX20_01958 -1.7 -0.7 Fumarase D compare
MPMX20_03706 -1.7 -3.2 Octopine catabolism/uptake operon regulatory protein OccR compare
MPMX20_01741 -1.7 -4.3 Dihydroorotase compare
MPMX20_00739 -1.6 -4.1 Carbamoyl-phosphate synthase small chain compare
MPMX20_01413 -1.6 -1.9 Molybdopterin synthase sulfur carrier subunit compare
MPMX20_01567 -1.6 -3.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_01046 -1.6 -1.8 DNA base-flipping protein compare
MPMX20_00766 -1.6 -3.5 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_03479 -1.6 -1.1 30S ribosomal protein S16 compare
MPMX20_00074 -1.5 -3.5 Outer membrane lipoprotein Blc compare
MPMX20_01984 -1.5 -1.5 Ribonuclease T compare
MPMX20_03323 -1.5 -2.0 Oxygen-dependent coproporphyrinogen-III oxidase compare
MPMX20_03440 -1.5 -3.5 Elongation factor 4 compare
MPMX20_02929 -1.5 -1.8 hypothetical protein compare
MPMX20_04545 -1.5 -2.9 Flavodoxin/ferredoxin--NADP reductase compare
MPMX20_01349 -1.5 -3.3 Citrate synthase compare
MPMX20_02309 -1.5 -3.7 hypothetical protein compare
MPMX20_03466 -1.5 -4.7 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_03382 -1.5 -2.1 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_01989 -1.5 -1.2 hypothetical protein compare
MPMX20_00222 -1.5 -2.0 hypothetical protein compare
MPMX20_01768 -1.5 -2.0 Large ribosomal RNA subunit accumulation protein YceD compare
MPMX20_04596 -1.5 -4.7 Sensory histidine kinase/phosphatase NtrB compare
MPMX20_02494 -1.5 -3.7 Orotidine 5'-phosphate decarboxylase compare
MPMX20_02769 -1.5 -1.8 putative transcriptional regulatory protein YebC compare
MPMX20_02216 -1.5 -1.8 hypothetical protein compare
MPMX20_02514 -1.4 -3.2 Tryptophan synthase alpha chain compare
MPMX20_02102 -1.4 -1.2 hypothetical protein compare
MPMX20_03318 -1.4 -4.0 Dye-decolorizing peroxidase YfeX compare
MPMX20_02478 -1.4 -4.3 Putrescine export system ATP-binding protein SapF compare
MPMX20_02476 -1.4 -1.6 Putrescine export system permease protein SapC compare
MPMX20_02993 -1.4 -2.8 hypothetical protein compare
MPMX20_03006 -1.4 -3.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_02598 -1.4 -1.3 tRNA-Tyr compare
MPMX20_03010 -1.4 -3.4 UDP-glucose 4-epimerase compare
MPMX20_04241 -1.4 -1.3 Protein SlyX compare
MPMX20_00230 -1.4 -2.6 Homoserine O-succinyltransferase compare
MPMX20_01068 -1.3 -2.1 hypothetical protein compare
MPMX20_01851 -1.3 -1.9 Putative NAD(P)H nitroreductase YdjA compare
MPMX20_03407 -1.3 -2.1 Chaperone protein HscA compare
MPMX20_03468 -1.3 -3.2 T-protein compare
MPMX20_00711 -1.3 -3.9 Homoserine kinase compare
MPMX20_04650 -1.3 -2.9 tRNA modification GTPase MnmE compare
MPMX20_02542 -1.3 -2.4 HTH-type transcriptional activator RhaR compare
MPMX20_04127 -1.3 -5.0 Glutamate synthase [NADPH] small chain compare
MPMX20_03683 -1.3 -3.2 RecBCD enzyme subunit RecB compare
MPMX20_04466 -1.3 -2.0 hypothetical protein compare
MPMX20_03285 -1.3 -0.8 hypothetical protein compare
MPMX20_00710 -1.3 -5.7 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_02512 -1.3 -4.1 Tryptophan biosynthesis protein TrpCF compare
MPMX20_00812 -1.3 -4.0 Aconitate hydratase B compare
MPMX20_00666 -1.3 -1.4 tRNA-Leu compare
MPMX20_02696 -1.2 -3.2 Murein tetrapeptide carboxypeptidase compare
MPMX20_03001 -1.2 -4.3 ATP phosphoribosyltransferase compare
MPMX20_00740 -1.2 -4.1 Carbamoyl-phosphate synthase large chain compare
MPMX20_02591 -1.2 -2.6 DNA-binding protein H-NS compare
MPMX20_00767 -1.2 -3.9 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_02992 -1.2 -3.2 hypothetical protein compare
MPMX20_03740 -1.2 -1.7 PTS system N,N'-diacetylchitobiose-specific EIIA component compare
MPMX20_00176 -1.2 -1.8 Cold shock protein CspA compare
MPMX20_02593 -1.2 -6.2 Regulator of RpoS compare
MPMX20_02307 -1.2 -1.4 hypothetical protein compare
MPMX20_03022 -1.2 -2.5 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_00768 -1.2 -4.6 3-isopropylmalate dehydrogenase compare
MPMX20_04112 -1.2 -1.4 Phosphocarrier protein NPr compare
MPMX20_04276 -1.2 -2.6 DNA adenine methylase compare
MPMX20_01391 -1.2 -2.5 Molybdenum transport system permease protein ModB compare
MPMX20_03004 -1.2 -3.2 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_04077 -1.1 -3.8 Argininosuccinate synthase compare
MPMX20_02344 -1.1 -1.3 hypothetical protein compare
MPMX20_03819 -1.1 -2.0 putative Fe(2+)-trafficking protein compare
MPMX20_02846 -1.1 -4.0 Regulator of sigma S factor FliZ compare
MPMX20_02864 -1.1 -2.0 hypothetical protein compare
MPMX20_02411 -1.1 -1.4 hypothetical protein compare
MPMX20_01361 -1.1 -3.0 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_02635 -1.1 -1.2 Release factor glutamine methyltransferase compare
MPMX20_00730 -1.1 -2.4 Glucose-6-phosphate isomerase compare
MPMX20_00031 -1.1 -4.0 Acetolactate synthase isozyme 1 large subunit compare
MPMX20_03746 -1.1 -2.2 tRNA-Gly compare
MPMX20_01050 -1.1 -1.6 hypothetical protein compare
MPMX20_04153 -1.1 -3.0 Ribonuclease G compare
MPMX20_02198 -1.1 -2.3 Glycerol-3-phosphate regulon repressor compare
MPMX20_02701 -1.1 -1.1 Fatty acid metabolism regulator protein compare
MPMX20_01137 -1.1 -2.9 Multiple antibiotic resistance protein MarA compare
MPMX20_00387 -1.1 -2.1 hypothetical protein compare
MPMX20_04126 -1.1 -5.2 Glutamate synthase [NADPH] large chain compare
MPMX20_01423 -1.1 -2.9 hypothetical protein compare
MPMX20_01823 -1.1 -2.9 hypothetical protein compare
MPMX20_02511 -1.1 -3.5 Bifunctional protein TrpGD compare
MPMX20_03435 -1.0 -1.1 Pyridoxine 5'-phosphate synthase compare
MPMX20_04189 -1.0 -2.4 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_01043 -1.0 -4.1 Ammonia channel compare
MPMX20_02437 -1.0 -1.9 hypothetical protein compare
MPMX20_00055 -1.0 -2.2 hypothetical protein compare
MPMX20_01596 -1.0 -6.6 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_02510 -1.0 -4.0 Anthranilate synthase component 1 compare
MPMX20_04443 -1.0 -1.1 Sec-independent protein translocase protein TatB compare
MPMX20_03047 -1.0 -1.8 dCTP deaminase compare
MPMX20_04110 -1.0 -2.0 Nitrogen regulatory protein compare
MPMX20_04319 -1.0 -2.7 HTH-type transcriptional regulator GntR compare
MPMX20_00873 -1.0 -0.9 Protein rof compare
MPMX20_02995 -1.0 -3.0 DNA gyrase inhibitor compare
MPMX20_02768 -1.0 -1.0 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_03675 -1.0 -1.6 tRNA threonylcarbamoyladenosine dehydratase compare
MPMX20_02997 -1.0 -3.0 Exodeoxyribonuclease I compare
MPMX20_00693 -1.0 -2.8 Phosphoserine phosphatase compare
MPMX20_04522 -1.0 -3.4 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_00998 -1.0 -1.8 Sec translocon accessory complex subunit YajC compare
MPMX20_04692 -1.0 -0.7 hypothetical protein compare
MPMX20_03002 -1.0 -3.8 Histidinol dehydrogenase compare
MPMX20_00602 -1.0 -2.3 Glycerol-3-phosphate regulon repressor compare
MPMX20_01474 -1.0 -1.7 hypothetical protein compare
MPMX20_03003 -1.0 -3.5 Histidinol-phosphate aminotransferase compare
MPMX20_00769 -1.0 -4.6 2-isopropylmalate synthase compare
MPMX20_03291 -1.0 -2.8 hypothetical protein compare
MPMX20_03589 -1.0 -3.3 Sorbitol-6-phosphate 2-dehydrogenase compare
MPMX20_03218 -1.0 -1.2 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_00123 -1.0 -1.5 Glutaredoxin 3 compare
MPMX20_01849 -1.0 -2.9 L-asparaginase 1 compare
MPMX20_01186 -1.0 -2.7 Transcriptional activator protein ExaE compare
MPMX20_01969 -1.0 -1.9 Carbonic anhydrase 1 compare
MPMX20_01367 -1.0 -2.5 Tol-Pal system protein TolR compare
MPMX20_01478 -0.9 -2.9 Deoxyribose operon repressor compare
MPMX20_04279 -0.9 -1.0 Shikimate kinase 1 compare
MPMX20_00133 -0.9 -2.1 Mannitol operon repressor compare
MPMX20_04521 -0.9 -2.8 Acetylglutamate kinase compare
MPMX20_03405 -0.9 -1.0 Protein IscX compare
MPMX20_03770 -0.9 -1.2 5-formyltetrahydrofolate cyclo-ligase compare
MPMX20_03983 -0.9 -2.3 hypothetical protein compare
MPMX20_02106 -0.9 -3.0 hypothetical protein compare
MPMX20_00927 -0.9 -3.3 Glutamate 5-kinase compare
MPMX20_02826 -0.9 -1.1 Cold shock-like protein CspB compare
MPMX20_01985 -0.9 -3.0 Lactoylglutathione lyase compare
MPMX20_01493 -0.9 -1.8 Ribosomal protein S6--L-glutamate ligase compare
MPMX20_04606 -0.9 -2.4 Molybdenum cofactor guanylyltransferase compare
MPMX20_00976 -0.9 -1.9 Pyrroline-5-carboxylate reductase compare
MPMX20_04665 -0.9 -3.7 hypothetical protein compare
MPMX20_03076 -0.9 -3.1 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase compare
MPMX20_01544 -0.9 -3.1 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MPMX20_04668 -0.9 -1.0 hypothetical protein compare
MPMX20_04524 -0.9 -4.4 Phosphoenolpyruvate carboxylase compare
MPMX20_03153 -0.9 -0.9 hypothetical protein compare
MPMX20_02279 -0.9 -1.1 hypothetical protein compare
MPMX20_00093 -0.9 -2.4 Orotate phosphoribosyltransferase compare
MPMX20_02470 -0.9 -3.0 Phage shock protein C compare
MPMX20_01354 -0.9 -1.0 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_03498 -0.9 -0.9 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_01781 -0.9 -2.3 PTS system glucose-specific EIICB component compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in nitrogen source experiments

For nitrogen source Beta-Lactose across organisms