Experiment set10S423 for Enterobacter sp. TBS_079

Compare to:

Thymine nitrogen source

200 most important genes:

  gene name fitness t score description  
MPMX20_00927 -6.7 -6.5 Glutamate 5-kinase compare
MPMX20_00831 -6.4 -4.4 RNA polymerase-binding transcription factor DksA compare
MPMX20_03681 -6.3 -8.7 Amino-acid acetyltransferase compare
MPMX20_00693 -6.2 -6.1 Phosphoserine phosphatase compare
MPMX20_03007 -6.1 -4.2 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_02514 -6.1 -4.2 Tryptophan synthase alpha chain compare
MPMX20_03771 -5.8 -9.6 D-3-phosphoglycerate dehydrogenase compare
MPMX20_01566 -5.7 -12.2 Phosphoserine aminotransferase compare
MPMX20_03002 -5.7 -10.9 Histidinol dehydrogenase compare
MPMX20_04127 -5.6 -10.2 Glutamate synthase [NADPH] small chain compare
MPMX20_03004 -5.6 -7.7 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_01697 -5.5 -3.8 Putative aminoacrylate peracid reductase RutC compare
MPMX20_03003 -5.5 -8.5 Histidinol-phosphate aminotransferase compare
MPMX20_04126 -5.5 -17.0 Glutamate synthase [NADPH] large chain compare
MPMX20_04077 -5.4 -8.3 Argininosuccinate synthase compare
MPMX20_00556 -5.4 -8.2 Ornithine carbamoyltransferase subunit F compare
MPMX20_01699 -5.3 -10.2 Pyrimidine monooxygenase RutA compare
MPMX20_02512 -5.3 -8.1 Tryptophan biosynthesis protein TrpCF compare
MPMX20_04597 -5.3 -6.3 DNA-binding transcriptional regulator NtrC compare
MPMX20_03006 -5.2 -8.0 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_02510 -5.2 -14.3 Anthranilate synthase component 1 compare
MPMX20_03705 -5.2 -7.1 Diaminopimelate decarboxylase compare
MPMX20_02513 -5.2 -11.1 Tryptophan synthase beta chain compare
MPMX20_03338 -5.2 -6.1 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_02511 -5.1 -10.9 Bifunctional protein TrpGD compare
MPMX20_04521 -5.1 -6.1 Acetylglutamate kinase compare
MPMX20_03001 -5.1 -11.4 ATP phosphoribosyltransferase compare
MPMX20_03466 -5.0 -10.1 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_00928 -5.0 -11.6 Gamma-glutamyl phosphate reductase compare
MPMX20_03247 -5.0 -8.9 Amidophosphoribosyltransferase compare
MPMX20_04523 -4.9 -7.6 Acetylornithine deacetylase compare
MPMX20_01320 -4.9 -12.8 Asparagine synthetase B [glutamine-hydrolyzing] compare
MPMX20_00711 -4.9 -11.9 Homoserine kinase compare
MPMX20_00710 -4.9 -13.8 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_04522 -4.9 -5.8 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_01349 -4.8 -4.7 Citrate synthase compare
MPMX20_01694 -4.8 -7.3 FMN reductase (NADH) RutF compare
MPMX20_00712 -4.8 -11.1 Threonine synthase compare
MPMX20_03005 -4.8 -8.0 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_01355 -4.7 -1.8 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_03653 -4.7 -13.3 GTP pyrophosphokinase compare
MPMX20_00226 -4.7 -9.0 Bifunctional purine biosynthesis protein PurH compare
MPMX20_03264 -4.7 -6.4 Chorismate synthase compare
MPMX20_00544 -4.7 -8.4 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_04162 -4.6 -3.2 3-dehydroquinate dehydratase compare
MPMX20_00740 -4.5 -8.7 Carbamoyl-phosphate synthase large chain compare
MPMX20_01098 -4.5 -6.8 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_03354 -4.5 -11.5 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_01696 -4.4 -10.3 Putative aminoacrylate hydrolase RutD compare
MPMX20_01366 -4.4 -6.7 Tol-Pal system protein TolQ compare
MPMX20_02494 -4.4 -8.4 Orotidine 5'-phosphate decarboxylase compare
MPMX20_04520 -4.4 -8.9 Argininosuccinate lyase compare
MPMX20_04596 -4.3 -9.1 Sensory histidine kinase/phosphatase NtrB compare
MPMX20_04499 -4.2 -14.3 Dihydroxy-acid dehydratase compare
MPMX20_04496 -4.2 -6.5 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_01030 -4.2 -8.6 Lon protease compare
MPMX20_03468 -4.2 -9.4 T-protein compare
MPMX20_00739 -4.2 -4.1 Carbamoyl-phosphate synthase small chain compare
MPMX20_01596 -4.2 -19.4 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_00225 -4.2 -11.4 Phosphoribosylamine--glycine ligase compare
MPMX20_03309 -4.1 -2.8 Phosphocarrier protein HPr compare
MPMX20_01901 -4.1 -2.8 Integration host factor subunit alpha compare
MPMX20_04278 -4.1 -2.8 3-dehydroquinate synthase compare
MPMX20_04189 -4.1 -4.9 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_01570 -4.1 -3.9 Integration host factor subunit beta compare
MPMX20_01698 -4.0 -5.0 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB compare
MPMX20_01368 -4.0 -6.6 hypothetical protein compare
MPMX20_00093 -3.9 -7.1 Orotate phosphoribosyltransferase compare
MPMX20_01567 -3.8 -6.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_01097 -3.8 -8.0 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_03426 -3.8 -17.2 Phosphoribosylformylglycinamidine synthase compare
MPMX20_01370 -3.8 -7.2 Peptidoglycan-associated lipoprotein compare
MPMX20_00721 -3.8 -2.6 Chaperone protein DnaJ compare
MPMX20_03008 -3.7 -7.2 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_00976 -3.7 -4.4 Pyrroline-5-carboxylate reductase compare
MPMX20_03090 -3.7 -1.9 Methionine--tRNA ligase compare
MPMX20_03641 -3.7 -9.2 Phosphoadenosine phosphosulfate reductase compare
MPMX20_01741 -3.7 -6.6 Dihydroorotase compare
MPMX20_04552 -3.6 -6.4 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_04524 -3.5 -15.8 Phosphoenolpyruvate carboxylase compare
MPMX20_01369 -3.5 -9.2 Tol-Pal system protein TolB compare
MPMX20_02476 -3.5 -2.4 Putrescine export system permease protein SapC compare
MPMX20_04275 -3.3 -2.3 Ribulose-phosphate 3-epimerase compare
MPMX20_04531 -3.3 -11.5 Cystathionine gamma-synthase compare
MPMX20_02766 -3.3 -4.5 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_02696 -3.3 -6.8 Murein tetrapeptide carboxypeptidase compare
MPMX20_02768 -3.3 -3.8 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_04119 -3.3 -2.2 DNA polymerase III subunit chi compare
MPMX20_03852 -3.3 -10.9 Cystathionine beta-lyase MetC compare
MPMX20_01942 -3.2 -8.9 HTH-type transcriptional repressor BluR compare
MPMX20_03318 -3.1 -7.2 Dye-decolorizing peroxidase YfeX compare
MPMX20_01068 -3.1 -4.7 hypothetical protein compare
MPMX20_01695 -3.1 -5.1 putative malonic semialdehyde reductase RutE compare
MPMX20_03310 -3.1 -5.1 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_00745 -3.0 -5.8 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_02593 -3.0 -17.5 Regulator of RpoS compare
MPMX20_04595 -3.0 -2.1 Glutamine synthetase compare
MPMX20_04110 -3.0 -6.3 Nitrogen regulatory protein compare
MPMX20_01382 -3.0 -2.1 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_03685 -2.9 -2.0 RecBCD enzyme subunit RecC compare
MPMX20_01014 -2.9 -11.1 tRNA sulfurtransferase compare
MPMX20_01551 -2.9 -6.8 Leucine-responsive regulatory protein compare
MPMX20_04559 -2.9 -4.6 Superoxide dismutase [Mn] compare
MPMX20_01367 -2.9 -5.9 Tol-Pal system protein TolR compare
MPMX20_03683 -2.9 -2.0 RecBCD enzyme subunit RecB compare
MPMX20_00570 -2.9 -15.8 putative BsuMI modification methylase subunit YdiO compare
MPMX20_00812 -2.9 -6.6 Aconitate hydratase B compare
MPMX20_04158 -2.9 -13.1 RNase E specificity factor CsrD compare
MPMX20_01156 -2.8 -4.7 hypothetical protein compare
MPMX20_04650 -2.8 -4.3 tRNA modification GTPase MnmE compare
MPMX20_01544 -2.8 -10.1 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MPMX20_03382 -2.7 -2.6 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_01028 -2.7 -3.2 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_04393 -2.7 -4.8 Low-affinity inorganic phosphate transporter 1 compare
MPMX20_04319 -2.6 -8.3 HTH-type transcriptional regulator GntR compare
MPMX20_01548 -2.5 -6.3 putative ABC transporter ATP-binding/permease protein compare
MPMX20_03267 -2.5 -4.3 Phosphohistidine phosphatase SixA compare
MPMX20_01361 -2.5 -8.8 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_04624 -2.5 -9.5 Regulatory protein AsnC compare
MPMX20_02591 -2.5 -6.4 DNA-binding protein H-NS compare
MPMX20_04493 -2.4 -8.7 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase conserved
MPMX20_04498 -2.4 -8.2 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_00807 -2.4 -2.8 Pyruvate dehydrogenase E1 component compare
MPMX20_01362 -2.3 -5.2 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_04626 -2.3 -4.4 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_04532 -2.3 -3.3 Met repressor compare
MPMX20_01549 -2.3 -4.6 ATP-binding/permease protein CydD compare
MPMX20_01958 -2.3 -1.2 Fumarase D compare
MPMX20_03806 -2.3 -3.8 hypothetical protein compare
MPMX20_04197 -2.2 -5.9 Trk system potassium uptake protein TrkA compare
MPMX20_02475 -2.2 -5.7 Putrescine export system permease protein SapB compare
MPMX20_03753 -2.2 -5.9 Tyrosine recombinase XerD compare
MPMX20_01673 -2.2 -10.6 N-carbamoyl-L-amino acid hydrolase conserved
MPMX20_02305 -2.2 -3.4 hypothetical protein compare
MPMX20_04465 -2.2 -5.3 Tyrosine recombinase XerC compare
MPMX20_00102 -2.2 -3.6 hypothetical protein compare
MPMX20_04285 -2.2 -3.9 ADP compounds hydrolase NudE compare
MPMX20_04642 -2.1 -2.5 Phosphate import ATP-binding protein PstB compare
MPMX20_00230 -2.1 -5.0 Homoserine O-succinyltransferase compare
MPMX20_04276 -2.1 -5.2 DNA adenine methylase compare
MPMX20_04670 -2.1 -1.9 hypothetical protein compare
MPMX20_02478 -2.0 -7.1 Putrescine export system ATP-binding protein SapF compare
MPMX20_02755 -2.0 -5.9 KHG/KDPG aldolase compare
MPMX20_03018 -2.0 -6.2 hypothetical protein compare
MPMX20_03562 -2.0 -4.3 Transcriptional repressor MprA compare
MPMX20_01354 -2.0 -2.4 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_02477 -2.0 -4.0 Peptide transport system ATP-binding protein SapD compare
MPMX20_03568 -1.9 -6.2 Glutamate--cysteine ligase compare
MPMX20_03706 -1.9 -4.7 Octopine catabolism/uptake operon regulatory protein OccR compare
MPMX20_04601 -1.8 -2.0 DNA polymerase I compare
MPMX20_04640 -1.8 -3.0 Phosphate transport system permease protein PstC compare
MPMX20_03636 -1.8 -3.5 Adenylyl-sulfate kinase compare
MPMX20_00086 -1.8 -1.5 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_03629 -1.7 -4.1 Protein-L-isoaspartate O-methyltransferase compare
MPMX20_01709 -1.7 -9.6 Protein PhoH compare
MPMX20_01586 -1.7 -6.6 Aspartate aminotransferase compare
MPMX20_04529 -1.7 -5.0 5,10-methylenetetrahydrofolate reductase compare
MPMX20_04306 -1.7 -4.8 Glycerol-3-phosphate regulon repressor compare
MPMX20_03308 -1.7 -4.8 Cysteine synthase A compare
MPMX20_03642 -1.7 -8.4 Sulfite reductase [NADPH] hemoprotein beta-component compare
MPMX20_03154 -1.7 -8.1 Inner membrane protein YejM compare
MPMX20_04518 -1.6 -4.6 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_04570 -1.6 -6.0 HTH-type transcriptional regulator SutR compare
MPMX20_03580 -1.6 -3.9 Protein RecA compare
MPMX20_04433 -1.6 -9.7 Trk system potassium uptake protein TrkH compare
MPMX20_04140 -1.6 -5.9 Malate dehydrogenase compare
MPMX20_03780 -1.6 -4.3 Transketolase 1 compare
MPMX20_00388 -1.6 -1.0 hypothetical protein compare
MPMX20_01286 -1.5 -1.2 Sec-independent protein translocase protein TatE compare
MPMX20_02672 -1.5 -11.5 hypothetical protein compare
MPMX20_00136 -1.5 -1.3 hypothetical protein compare
MPMX20_04467 -1.4 -3.8 Diaminopimelate epimerase compare
MPMX20_01552 -1.4 -4.0 hypothetical protein compare
MPMX20_04647 -1.4 -4.4 hypothetical protein compare
MPMX20_03390 -1.4 -5.6 Outer membrane protein assembly factor BamB compare
MPMX20_01969 -1.4 -3.3 Carbonic anhydrase 1 compare
MPMX20_02957 -1.4 -9.5 DNA-cytosine methyltransferase compare
MPMX20_00767 -1.4 -5.7 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_01353 -1.3 -3.7 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_02576 -1.3 -2.6 Protein TonB compare
MPMX20_03022 -1.3 -3.3 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_04400 -1.3 -8.0 Cytoplasmic trehalase compare
MPMX20_00899 -1.3 -1.3 Ribonuclease HI compare
MPMX20_03770 -1.3 -4.1 5-formyltetrahydrofolate cyclo-ligase compare
MPMX20_02825 -1.3 -2.2 Cold shock-like protein CspB compare
MPMX20_01027 -1.3 -5.7 Trigger factor compare
MPMX20_03643 -1.3 -5.3 Sulfite reductase [NADPH] flavoprotein alpha-component compare
MPMX20_01469 -1.2 -6.0 Glutathione import ATP-binding protein GsiA compare
MPMX20_03248 -1.2 -3.5 Colicin V production protein compare
MPMX20_00105 -1.2 -6.9 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_03226 -1.2 -3.1 Acetate kinase compare
MPMX20_04029 -1.2 -1.5 Cyclic dipyrimidine nucleotide synthase compare
MPMX20_01543 -1.2 -1.3 ATP-dependent Clp protease adapter protein ClpS compare
MPMX20_00087 -1.2 -1.9 DNA-directed RNA polymerase subunit omega compare
MPMX20_02767 -1.2 -2.7 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_00768 -1.2 -6.0 3-isopropylmalate dehydrogenase compare
MPMX20_02574 -1.1 -2.3 putative intracellular septation protein A compare
MPMX20_01952 -1.1 -1.1 hypothetical protein compare
MPMX20_00106 -1.1 -4.2 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_02590 -1.1 -7.4 Thymidine kinase compare


Specific Phenotypes

For 21 genes in this experiment

For nitrogen source Thymine in Enterobacter sp. TBS_079

For nitrogen source Thymine across organisms